Basic Information

Gene Symbol
ncor1
Assembly
GCA_029851415.1
Location
CM056742.1:17059041-17071559[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-09 2.7e-05 25.9 0.1 3 43 812 852 811 855 0.96

Sequence Information

Coding Sequence
ATGCTTAATCCTGTCGAAATCCATTCATGCCATAGGCCCCAGCAGAGCTACGGTCCGAGCTCGCGTCGAGCGCTGTCTCCGCGTACGGTCGAGGGTAGCGGGGTTGTTGGGGGCGGGGGAGCTGGCGTCGGCGGCGGTGGTGGTGCCGGgggtggtggcggcggcggcaACAGCGCTGGCGGGCCTCCCGGCGCAGGTGCCGTTCGCTACCCCCACCAGcatcaacatcaacaacatcaacaacaacaacagcatcaACATCAATACCATCATCAATCGTACAGTCAGGGGCCACCACCGCCGCCGCCGTCGACgcatcaacagcagcaacagcagcagcatcatcatcagcaaTCAAGTCCTGGGCCCGTTGGGGCACCACAACAACAACCACAACAACAGTCAGGTGGTCCAGGACCAGGATCAGCACCACAACAGTCACAGACAGCTCCCCAGCTGCATCCCTATTATCATTATCATCCATCGGCAGCACCAGCTCCGCCTAGTTCACAGTTTTTGCAACCGCCGTTACCGCCGCCTCCTCACCAGGTCGCCGGCGCAGGCGGAGCAGCCTCATCATCATCGCCGGGCCCGTTGGCGATGAACAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTACAAACGAATTCATCGTCAGCCCGAGATCAGCATCCGGCGGGAAGCGACCCAAGCAACCTGAACATAACGATAATGAACATTACGGTACCACCGGTTGTTCCGGTGCCCGCGGGTCTTCGCTTCGTTCATCCGACGTACTtgccaccgccaccaccgccacAATCTGTTGTTTCAGTCGCCCAGGTCGCCCCATCAAATTCGGCCTCGCCAGTTTCAGCTTCTTCGGTTCCATCGCCACATCATCCGCCCAGTCCCATATTACACAGCTCGagacagcagcaacagcaacagtcTCAGCATCCACCTTCGGTACCTTCGCCTGCATCGTCAGGAGCTGCTGCATACACAAGAGACGTTTATCGAAACGCCAGTCCAAACGTGAACGAGCGAGCAGCGATAAGCGTAAGCAGCAGTCCAGTCTCGTCTCAACTTGTCGGAATGGGTGGAGATTACGGTGTGGTAAGCAGTGGTCGCAGCGATCGTCCAAGGATATCTCTTCTGCCAGCACCGGCATCGATAGCGCCCGCAGCCTCGCCCACCGCACCAACAGACTATCACGCGCGAAATAACAGCAGCAGACCAAGCTCCGGGGCGCCGCCCATCCTGGCCATGCAACCTCAGGACTATCGTCCCAGTCCTGTCGACATGGCTCAACAAATTCAACAACAGCAAGATGCTCCGCCTTTCAAAAAGATCCGTCTTGGTCAGCCCACCCAGCAACTGCCACCCtcgcaacagcaacaacaacaacaacaacaacaacagcagcagcaacctACGATTACGCAAACGGAAAATCAGAGGATGAGTGGAGGCCCAGATGCACTTATTAAGCAGAAACACGCGCCACAACTGCCACCGCTTAGGATAGACACAAGGCCTCCGACAGGTGCTTACACGCCTCAGACAGAGGCGATCTCGCCAACTCTCCCTGAACCTGGTACGCAAGAGGATGCAGCATTCAGAAGTACCAAAGAAGATCTCCTCCAACAAATATCCAAGGTTGATAGGGAAATCGCAAAACGGGAATCCGCCATTAGTAAGCTTCGGAAAAAGCTGAAAGAGTTGGAGGAAGTTGCCAGTCAACCGTTGGATGCTGGCAAGCGACCCGTCGAGGAAGCGTCTTTGCAGCCTAAACATCAGTCTCTCGTACAGAAGATTTATGCTGAGAATAGGAAAAAAGCTGAAGAGGCGCACAGGTTGCTTGAAAAGCTTGGGCCAAAAGTGACTCTTCCGCTCTACAATCAGCCATCAGATACTACTGTGTACCAGGAGAACCGGGTGAAGCACCAGTGCATGAAGGCGCGTCTTGTGGCAAGGTTACGTAAAGAACATGCTGACCGTGCCTCTCTGCATCGTCAACAGTCTCAGACGTACGCGATACTTGTGCAAGAGTGGCATCGAAAGGTGGAAAAGCTCGAATCAACGCAAAAGCGGAAAACAAAAGAGGCAAAGAATCGcgaattctttgaaaaagtcTTCCCAGAATTACGCAAGCAGCGCGAGGATAAGGAGCGTTTCAACCGAGTTGGTGCACGCATCAAAAGTGAGGCTGATCTCGAGGAGATCATGGATGGTCTGCAAGAGCAGGAGGAAGAGTTGTCAACCGAGTTAAAAAATGCGTTGAAAGCTCGTCAGATGGAGGATAAAAAAATGCGCTCATACGCTGTGATCCCGCCGCTGCTGTTGGACGCGAAGCAGCGGAAAATAGCATTTCAAAATCGCAACGGTCTGCTACAGCCCGAAGAGCTTGAGGCGTTGCACAGAGAAAGAAAGCTTATAAACGTCTGGAGTCAGACGGAACATGAGCTATTCAAGGAGAAATATCTCCAGCATCCCAAGAATTTTGGAGCTATTGCTCAGGCGTTTGAGCATAAAAACGTTTCGGACTGCGTGCATCATTACTACCTCACTAAGAAAGCGGAAAATTATAAGCAGCTACTGCGAAAGTCAAGGCGTACGCGTAGTTCTCGAAACAATCCTAATAATAAGGTAAATAATAGTAACTCCACAATCGGACCTATAGATATATTAACGACAGGAGTAACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACTCAAGAAAATCCACAGAGTAGTAGTTCGGCAACTtcgagtagtagtagtaatagtATCAATGTTAACTCTTCAACGACGTCGACATCGTTAGCAACGTGTACGAGCTCGACGACAGTTGTCACGAGTAGTACTGTTAGTGTGGCGTCGTCGATATCGAGTTCTGTCACCACGTGTTCGTCCAGTACGAGTACAAGCTTGTCGGAGTCTATGACGACAACGTCAGCAACGACGATAACGTCGGtggcagcagcatcagcagcatcCGTCCCAAGTACGAATACGACGTCAACAACGTCGAGCGTACTTACAACGACTTCAACGTCGTCTATTAGCAACGCTAAAGATAATCGCGAGGCTAATAAGGAAAATAAGGAGATCAAAGTGGAATCGAAAGATTCTGTGCACATGAAAGATCCTAAGGAGGAATCGCAATCAAGCTCCGAAACACTGTCCAGCAGGGAGATGAAGGTTGAGAGCAAAGGCGCCCTGTCTTCGTCGTCTAATGCAAGCGTGGCTAACACGAACGCCAACAGCAATCTTCAGCTTGAACAGCAGCAAATGCTGAAGGACAAGAAGAAGAATGCGAGTATCGCGAGCGGTTCAACGTCTACCAGCAGGTCGAAAGATAAGAAGAAAGAAAATCATGCGACACCGATGGAAACCAGTGACGAGGAGGCGCAAGGTGAGTACTAG
Protein Sequence
MLNPVEIHSCHRPQQSYGPSSRRALSPRTVEGSGVVGGGGAGVGGGGGAGGGGGGGNSAGGPPGAGAVRYPHQHQHQQHQQQQQHQHQYHHQSYSQGPPPPPPSTHQQQQQQQHHHQQSSPGPVGAPQQQPQQQSGGPGPGSAPQQSQTAPQLHPYYHYHPSAAPAPPSSQFLQPPLPPPPHQVAGAGGAASSSSPGPLAMNSGPAGGPGQPPAGLQTNSSSARDQHPAGSDPSNLNITIMNITVPPVVPVPAGLRFVHPTYLPPPPPPQSVVSVAQVAPSNSASPVSASSVPSPHHPPSPILHSSRQQQQQQSQHPPSVPSPASSGAAAYTRDVYRNASPNVNERAAISVSSSPVSSQLVGMGGDYGVVSSGRSDRPRISLLPAPASIAPAASPTAPTDYHARNNSSRPSSGAPPILAMQPQDYRPSPVDMAQQIQQQQDAPPFKKIRLGQPTQQLPPSQQQQQQQQQQQQQQPTITQTENQRMSGGPDALIKQKHAPQLPPLRIDTRPPTGAYTPQTEAISPTLPEPGTQEDAAFRSTKEDLLQQISKVDREIAKRESAISKLRKKLKELEEVASQPLDAGKRPVEEASLQPKHQSLVQKIYAENRKKAEEAHRLLEKLGPKVTLPLYNQPSDTTVYQENRVKHQCMKARLVARLRKEHADRASLHRQQSQTYAILVQEWHRKVEKLESTQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTELKNALKARQMEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELEALHRERKLINVWSQTEHELFKEKYLQHPKNFGAIAQAFEHKNVSDCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSSSATSSSSSNSINVNSSTTSTSLATCTSSTTVVTSSTVSVASSISSSVTTCSSSTSTSLSESMTTTSATTITSVAAASAASVPSTNTTSTTSSVLTTTSTSSISNAKDNREANKENKEIKVESKDSVHMKDPKEESQSSSETLSSREMKVESKGALSSSSNASVANTNANSNLQLEQQQMLKDKKKNASIASGSTSTSRSKDKKKENHATPMETSDEEAQGEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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