Ehay056098.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- lov
- Assembly
- GCA_029851415.1
- Location
- CM056744.1:106515816-106518495[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.1e-05 0.14 13.6 0.1 5 40 180 215 177 219 0.86 2 4 4.1e-10 6.2e-07 30.7 0.0 3 39 228 263 226 268 0.92 3 4 0.013 20 6.7 0.0 19 33 295 309 283 314 0.78 4 4 9.7e-12 1.5e-08 35.9 0.2 1 37 337 373 337 378 0.95
Sequence Information
- Coding Sequence
- ATGGATGTCAAATCCGGAGGCAGCGTCAACTTCCTCTGGAGTAACTATCATAGCTATTTGTCTGATGTAGTGCGACAGCTTCATAACGAAGAATGTCTTTTGGATGTCACCCTGTGTGTTGAGGGAGAGCGAATTCAAGCACATCGACTCGTTCTTTGCTCCTGTAGTAGTTTGTTCCAGaatattTTAAGTAAAGTTACCGATGAACATACAACAATTATTCTGAGTGACGTAACTTCCGATGATGTCAGGTCCATTGTTGAATTTTGCTACAATGGAGAAATTAGAGTACCAGTTGACAATATCAACAGTTTATTGGAAACTGCACATTCCCTTAAAATATTTGGCCTAATGGAGATCCCGAGTATGAATGATGTCGGAATTGATGACAAGGAAGAGACATTTGATCAAATAACATTTGTTGAAGACATGGAAATCATTCATGATGATACAAATGATTCAACAGAAAGTTTGACAGAAAAGAAAGTGGGAAAAAGAAAATTGACTAGCATTGATGATGCAGAGTTCAGTGAGGGTTTAAAAAATGCTCTATCTGACATGAGTAAAGGCATGTCTATAATAGATGCATctacaaaatatcaaatttcaagatctaaaTTGTATGCCAAAGCAAAAAAGTGTGGTATTGCACTGACTCCCACTAAAATTGACTATACAATTGAAAATATACGAGCAGCAATCAAGGATGTAGTAGACGGATCCAGTCTACAAGAAGCTGCAATCTGCCATGGAATACCAAAAACTGTTTTGTGGAGGAGATTGCAAAAAGAGGGTGGCTCGGCAGGGAAAATGGCGGCACGGAAGAGCTATCTTGCTGAAACTAGAGAAGCTGCTGTGAAAGCATTAGAGAGAGGTGAATGTCTGACAAAAGTTGCTCAGGAGTACAAGATACCTAAAACTACTCTATTTCGAGATAAAACGAAATTAGTGAATGAGGGGAAGCTACCAGAACATGCAATAAAACGTGCATCTGCTGATGAGGAAAACAAAAACGAGGCATTAGAGAAAGCTGTAGCTGCTTGCAGAGCAGGCAGAATGTCACAAGCTTCAGCTTCAGCAATGTATAAAGTTCCAAAAACAACCATATGGAGGCATCTCCACAATGCGAAAAAAGGTCAACAGACTATGAAAATACGTCGTATTGATACCAAAGAAGCCGATGGATCTTCTGCAGTCAAATCAGCTGTGCAGGAGCCTACAGAGGATGACTATAGCGAGATAGAGGAAGCAAATGAAGGTGACCTAGAATATATTGGTGATGAAGGAAACATATCTGAAGATCAAGTAATAATCCTTGGTGAAGGTACAGATGGTATGAATATGCAGAATAGTACTTCCCTCATTGTTGTACAAgACACCGATAACAATTTCATTACGTGTGGACTAGAGTTGGGAGAGGTTGAAAATTTCACACCCAAAAGCTAA
- Protein Sequence
- MDVKSGGSVNFLWSNYHSYLSDVVRQLHNEECLLDVTLCVEGERIQAHRLVLCSCSSLFQNILSKVTDEHTTIILSDVTSDDVRSIVEFCYNGEIRVPVDNINSLLETAHSLKIFGLMEIPSMNDVGIDDKEETFDQITFVEDMEIIHDDTNDSTESLTEKKVGKRKLTSIDDAEFSEGLKNALSDMSKGMSIIDASTKYQISRSKLYAKAKKCGIALTPTKIDYTIENIRAAIKDVVDGSSLQEAAICHGIPKTVLWRRLQKEGGSAGKMAARKSYLAETREAAVKALERGECLTKVAQEYKIPKTTLFRDKTKLVNEGKLPEHAIKRASADEENKNEALEKAVAACRAGRMSQASASAMYKVPKTTIWRHLHNAKKGQQTMKIRRIDTKEADGSSAVKSAVQEPTEDDYSEIEEANEGDLEYIGDEGNISEDQVIILGEGTDGMNMQNSTSLIVVQDTDNNFITCGLELGEVENFTPKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00668823;
- 90% Identity
- iTF_00668823;
- 80% Identity
- iTF_00668823;