Basic Information

Gene Symbol
ct
Assembly
GCA_029851415.1
Location
CM056742.1:183072201-183087504[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.9e-28 1.8e-23 84.0 0.0 2 72 434 505 433 510 0.95
2 3 2.2e-32 4.5e-28 98.8 0.0 3 77 885 960 883 962 0.96
3 3 5.1e-31 1e-26 94.4 0.0 4 76 1131 1204 1128 1207 0.96

Sequence Information

Coding Sequence
ATGGGACATCACTCGACGACTGATCGATTGCAATTGATTGGATACGAAATGCAGCATTCGAGAGATGTAGCTCTTGACAAAGCTATTTTCGATATCGTTCTTataaatcaGTTGATGGAGGAAGTTTCGAGGCTTCAGATGAGCTTGCAACGGTTGCAAGAAACGAGTGCACAGCAGCAAGCGAGATTTGAAGAAGAATTGGATGCGAGGCGTCAACACATAAGCAGACTCGAAGCTAGGTTAGACAGACAAAAGGACTACGATGAGTTGAAGAGGGAAATCAGTGCACTGAGGAGCGTTGACTTATCTCAGATACCTACGGGAGAAACGGGAAAAAGTTTAGAACAGTTGTTGATCGAGAGGTCCAAGGCGTTACAACAGGCTGAGAGCCAATTGAAGCCACCCAGCACGCCTGACAATCTCGGTGGACTGTCGTCGCCTTTGCAACGTGCCGGTACGACGTCACCTCACGGCTGCGGCTCGCTGCCGTCGTCAATCGCGCCTCCGGGCTCCACAGCCGCTTCTCTCGTTGCGCCATCCGCCACCGCTTCGTCGATCCCGAGCCGCTCCACTCCCACTCCGTCGTCGGTTGCCGCGTCACTGACGACCGGCGCTGGCGCTGGCTCGTCCTCGCTCCTGTTCCCCCCACCTCTCCAGGGCGTCGAAACGTACGGCTCATTCCTCGGCGAAGAGCTCGTCAACGAGTGGAGGCGTACCCTCGAGAGGTCAATCCTcaatcagcagcagcaacagcatcagcagcagctgAGGCCACCCACGTCGGCGACGCCAACTAGTCAACTAAACCAGCTTCCGTCGCCAACAGATGCCGTCAACAAACCCGGGACGCCACTCGACTGCTTGACGGAGAAGGCAACGACGCCGCTCTCGGGTCACGAGACGCCGGCACCACCAACGCCATCCAGCACCGCAACGCTCACCTCTCCGCCACTCCAGCTGACCGGTTCCGGATTGGCGTCGACGTTAGAGGGCGCCACCGGTGGTCTCCTCCAGAACGGCCCAACACTCGCGCCCAAGAGCCCTGTAGAGGAGTCCGTCtgccacaacaacaacaacaacagtcACCACTTGGCGAACAACAACATTGGAGCGCTCAGCATGTTGGACAGTCTGAAGAGTCCGTTCCGTTTCGATGAGCGGACGCATCCGTTCAGGTTCGGCGATGAGTTCGGAGTGGCTGGCATGGCTGGCAGACTCGGAGAGTCACTGATACCCAAAGGTGACCCGATGGAGGCCAGATTACAGGAGATGCTACGCTACAACATGGACAAGTACGCGTCACAGAACCTCGACACACTGCACATTGCCAGGCGTGTGAGGGAGCTTCTGTCGATACACAATATCGGCCAAAGACTGTTTGCCAAATACGTGCTCGGGTTGAGTCAGGGTACGGTGAGTGAGCTGCTGAGCAAACCCAAGCCCTGGGACAAGCTGACAGAAAAAGGCCGCGACAGCTACAGGAAGATGCACGGATGGGCCTGCGATGAAAACGCCGTCTTGCTGCTCAAATCCCTCATACCTAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGAGCGCTTTTGCACGTGGCCCTCCGGAGGGTGGACCCAACAGCAACAGCAATAGTGGGCCCACTGGAAGTGGTGCTGCCCAAGAACTCAGTGAGGAGCGGATTGCGCATTTGCTCTCTGAAAGTGGACAGCATCGAGAACTTGACTGCTCAAACGACACCGACAGTAAAAGCCCCAGCAGAATGAACTGCCCGAGTCCATTCGGAAGTAAGGATGGCAGAGCGAGTAGCCTGGATTCGCAACAACGTAGACTCAAAAAGTATGAGAACGACGACATTCCGCGGGAGAAGGTGGCCAGAATCTATCAGGAAGAGCTTGCAAAGATCATGGGACGCAGGGACGAAGATCTGCGGCCAGGGCCCCGAGACTTTTCCTCCAGCGCGATGTTTCCCAACTTTTTCAGTGGCGGTGTCCAGGGTATGGAGCGCACCCAGGAGGAGATCCGCATGGCTCTGGATGCATACCACCGAGAACTCCAGAAGCTCAACGTTGCCCAAGGCTTGCCCTATCCACCACAGATCTCGAGTCTTCTCGCTCTCCAACAACATGCGATCCAACAACACCACCTGGCAACTAACGGTGGTGGAGCCGGAGCCGGAGCCGCGGCCGCCGCGGCCGCTGCAGCTGCAGCTGCCGCAGCGGCGCAAGACCTCAGCCTAGGCAACATCCTCCGGAGCAAAATGATCAATGGTGGCATCTCAGAAGAGGAGAAGGAGAAGATGGAGGAGGCAATGAGACACGCAGGAAGCGCCTTCTCCTTAGTCAAACCAAAACAGGAGCCCGGTACTGTGACACCAGGTGGCGCCACCGGTGCCGGTGTTGGAGGCCCCGGAGGAGCGCAATCTACACCAGGCGGATCGAGCGCGAGTTCGCCACTTGGTAACTCGATCCTGCCACCGGCGATGACGCCCAATGAAGAATTTGCTGGAGCAGCAGCGGCTAGCCCGCTCCAGAGGATGGCTTCCATCACCAACAGCCTCATCAGTCAACCGTCCACGCCGAGTCACCACTCGTCGAATCAAAGGCCGCTGAAGGCTGTGCTGCCGCCAATCACGCAGCAACAGTTTGACATTTACAACAATCTCAATACCGAGGACATTGTCAAAAGGGTCAAGGAGCAGCTTTCTCAGTACTCGATCTCTCAACGCCTGTTTGGCGAATCCGTTTTGGGCCTATCTCAGGGCTCCGTATCAGATCTTTTGGCGCGGCCGAAGCCTTGGCACATGCTCACTCAGAAGGGACGAGAGCCCTTCATCCGAATGAAGATGTTCCTCGAGGACGACAACGCTGTTCACAAGCTAGTGGCTAGCCAGTACAAAATTGCCCCGGAGAAATTGATGAGGACCGGAGGCTACGGCGGCCTGCCTCCTTGTGGAACCCCGATGAAACCAATGGCACCCACGAAACTTGTCCAGGAGCAGAACGCAGCCAAAGCCCAAGCAGCAGCTCAGTTTGCAGCgcaagcagcagcagcagctcaaCATCAACAGGAGAGTCAACTTCTGGGAAGACCACAACAGAGTCCACAACTCCCACCGCATCCACAGTCCGCAGCTGCAGCAGCGGCTGCGGCAGCCATGATGCTCAGCCCAACGAGTTCGCTTCTGCAGAGTCACGCACAGCTTACGACCATGCAAGAGCTTCACAAGAAACAGCAACAGGCACAGCAGCAGgctcaacaacagcaacagcaacatcaTCAAAACGCCCAGATGAGTTTACACTCTCCACATCATCAGTTAGCAGCTGGAGCGCTACACTTGCTCCATCCGCACGTGTCTCCAAGCGTCTACGAAATGGCTGCGCGAACGCCAGATCTCGACACGCAAACTATCACGACGAAGATCAAGGAAGCTTTGTTGGCCAACAACATCGGTCAAAAGATCTTTGGCGAGGCAGTTCTTGGCCTCAGTCAAGGCTCGGTCAGTGAACTTTTAAGTAAACCAAAGCCATGGCACATGCTAAGCATCAAGGGACGAGAACCTTTCATCCGAATGCAGATGTGGTTGTCAGACGAGCACAATATCGACAAACTGCAGGCATTGAAGAACGAACGTCGAGAGGCAAACAAGAAGCGGCGCAGCAGTGGTCCTGGTCACGACAACAGCTCCGATACCTCAAGCAACGACACGGCCGAGTTCTATCATTCGGCATCTCCTGGACCAACATCGGCGAAGAAGCAGAGAGTCCTTTTCAGCGACGAGCAGAAGGAAGCTTTGCGGCTTGCTTTTGCTCTTGATCCTTATCCAAACGTGGCGACGATCGAGTTCCTCGCGAACGAGCTTGGTCTGTCCACCCGAACCATCACGAATTGGTTCCACAATCACCGCATGAGACTGAAGCAGCAATCACCTCACGGACAATCAGAGTCACCGGTGGCTGGTCGAGAACCCGGTCAGCCCTTCGACCCTGTGCAGTTTAGACTGCTGCTAAACCAAAGACTGCTGGATATCCAGAAGGAAAAATTGGGCTTGGCCGGTCTAGGTGGCGTTCCTCTCGGCTATCCTCCATACTTCAATCCTAACCTCGCAGCTCTCGTTGGTAACGCTCTGAAGGAGCAGTGCGCTGGCCTGGACTTGTCCATGGGCTCGTTGAAACGAGAACCCCATGGCGAgttcgacgacgacgacgcagaCGACGCAATGAGCAACCTCGGAAGCGAAGATTCCGTCGGCTCGGCAACCAGCGTGAAGCGCGAACCTTCGGAAACCCCGACTCCGACGAGTGTAGCTGCAGCAGCTGCCGCTGCGGCGGCGAGGTCCAACCGACGGAAACCCGCAGCACCCCAGTGGGTCAACCCGGAGTGGCAGGAGCCTTCGGTTGCAGCTGCAGCGGctgcggcagcagcagcagcaacgacAGGTAGCGCCACCGGTGATGAGGTCATCATCAATGGTGTCTGCGTGATGCAAACGGGAGAAGATTACTCGGTAAAGCACGACTCCGAGGAGACGGTCCGCGTTGATCCCATACCTGTTCAGGACAGGTTCGACGAAGACGAGGCTCAGAGTGACGCGTCGTCTGTTTCCGCTGCAAACGCCCAGGATCGTGAAAGTCCCTCGCCCAGTCTCAAGTCCACGCATAATAGTCCCGCGGCATCGCCCGAACCGAACGCCGTCACCGGTCAGCAACATACGCTTGGTTCCGAAGAATCCGCTCTCGATAGGATTAGTCCCAAAGATCTCGTAAAAAACGAGCCTGATGATGCCTGGGATTACTAA
Protein Sequence
MGHHSTTDRLQLIGYEMQHSRDVALDKAIFDIVLINQLMEEVSRLQMSLQRLQETSAQQQARFEEELDARRQHISRLEARLDRQKDYDELKREISALRSVDLSQIPTGETGKSLEQLLIERSKALQQAESQLKPPSTPDNLGGLSSPLQRAGTTSPHGCGSLPSSIAPPGSTAASLVAPSATASSIPSRSTPTPSSVAASLTTGAGAGSSSLLFPPPLQGVETYGSFLGEELVNEWRRTLERSILNQQQQQHQQQLRPPTSATPTSQLNQLPSPTDAVNKPGTPLDCLTEKATTPLSGHETPAPPTPSSTATLTSPPLQLTGSGLASTLEGATGGLLQNGPTLAPKSPVEESVCHNNNNNSHHLANNNIGALSMLDSLKSPFRFDERTHPFRFGDEFGVAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMSAFARGPPEGGPNSNSNSGPTGSGAAQELSEERIAHLLSESGQHRELDCSNDTDSKSPSRMNCPSPFGSKDGRASSLDSQQRRLKKYENDDIPREKVARIYQEELAKIMGRRDEDLRPGPRDFSSSAMFPNFFSGGVQGMERTQEEIRMALDAYHRELQKLNVAQGLPYPPQISSLLALQQHAIQQHHLATNGGGAGAGAAAAAAAAAAAAAAAQDLSLGNILRSKMINGGISEEEKEKMEEAMRHAGSAFSLVKPKQEPGTVTPGGATGAGVGGPGGAQSTPGGSSASSPLGNSILPPAMTPNEEFAGAAAASPLQRMASITNSLISQPSTPSHHSSNQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPPCGTPMKPMAPTKLVQEQNAAKAQAAAQFAAQAAAAAQHQQESQLLGRPQQSPQLPPHPQSAAAAAAAAAMMLSPTSSLLQSHAQLTTMQELHKKQQQAQQQAQQQQQQHHQNAQMSLHSPHHQLAAGALHLLHPHVSPSVYEMAARTPDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLSDEHNIDKLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHSASPGPTSAKKQRVLFSDEQKEALRLAFALDPYPNVATIEFLANELGLSTRTITNWFHNHRMRLKQQSPHGQSESPVAGREPGQPFDPVQFRLLLNQRLLDIQKEKLGLAGLGGVPLGYPPYFNPNLAALVGNALKEQCAGLDLSMGSLKREPHGEFDDDDADDAMSNLGSEDSVGSATSVKREPSETPTPTSVAAAAAAAAARSNRRKPAAPQWVNPEWQEPSVAAAAAAAAAAATTGSATGDEVIINGVCVMQTGEDYSVKHDSEETVRVDPIPVQDRFDEDEAQSDASSVSAANAQDRESPSPSLKSTHNSPAASPEPNAVTGQQHTLGSEESALDRISPKDLVKNEPDDAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00668293;
90% Identity
iTF_00668293;
80% Identity
iTF_00668293;