Basic Information

Gene Symbol
KDM5A
Assembly
GCA_029851415.1
Location
CM056742.1:137699291-137711823[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-24 1.3e-20 75.2 0.0 2 89 114 197 113 197 0.94

Sequence Information

Coding Sequence
ATGAGGATGACGGCGAGGCAGAGCTCGTCACCCCGGAAGCAGCAGCCGTTACCCTCGACGGCCTTACCCAGCGAAACTAGTGCGGCTGGTTCTACTCcacagaaaaatgattttgaattccAAGCACCACCCGAGGCACCGGTATTCGAGCCCACCGTTGACGAGTTCCTCGATCCGCTTGGATACATTGCCAAGATTAGGCCCATCGCTGAAAAATCTGGCATCTGCAAGATCAAACCGCCCCCGAACTGGCAACCACCATTTGCAGTAGATGTAGACAAATTCAAATTTACCCCAAGGATACAGAGGCTTAATGAATTAGAGGCAAAAACTAGGATAAAGctgaattttttggaccagATAGCCAAGTTCTGGGAACTTCAAGGATCATCGCTCAGAATTCCATTGGTAGAGAGGAAAGCCTTAGATTTATATTCATTGCACAGAATTGTCACAGATGAAGGTGGTGTAGAAACAGTAACAAAAGAAAGAAGATGGGCAAAAATCGCTAATAAGTTGGGCTACCCTTCCGGACGAAGCGTCGGAAGTATCCTGAAAAGTCATTATGATAGAATTTTATATCCCTTTGACGTCTTTAAACAAGGAAAAACATTAACAGACATAAAAATTGAACCAGAATGCGATGAAAACGAGAAGAAAGATCGTGATTATAAACCTCATGGAATTATTTCACGGCAGCAGATCAAACCtcctcaagaaaaattttcgcgtaGATCTAAGCGTTTCTCAGGTCAAGATGAGAAACAAAATGGACGTCAGTCGGCCCTCAAGCAAGAAGAGTGTAAGGAAGAGCTCGATTTTGACTGTAAAGATGATGTCAAAAGTAAGAACTCAACAGATTCAAAGGACTGTATCAAAACTAGAGGTGCAGCAGCAGAAAAAGACAAGGAAAACAGCAAAGAACTCAAGAAGCTTCAATTCTATGGAGCTGGTCCAAAAATGGCGGGATTCGTCACCAAAGAGTCAACTAAGAAAGCTAACAAAACTAGAGGAATCAAACTAGTCTATGAATTCGATCCACTTGCCAAGTACGTTTGTCATAATTGTGGCCAAGGTGACAATGAAGAAAACATGCTTCTTTGCGATGGGTGTGATGACAGCTACCACACATTTTGTCTTCTGCCTCCTTTGACTGAAATCCCAAAGGGAGACTGGCGATGTCCAAAATGTGTTGCCGAAGAAGTATCAAAGCCAATGGAGGCTTTTGGTTTCGAGCAAGCTCAGAGAGAATATACTCTACAGCAGTTTGGAGAGATGGCTGATCAATTCAAGAGCGATTATTTCAGTATGCCTGTGCATATGGTGCCGACTCATCTTGTTGAGAAAGAGTTTTGGAGAATTGTATCATCTATCGATGAGGATGTCACCGTGGAGTATGGTGCAGACTTACATACAATGGACCATGGGTCAGGGTTTCCAACAAAAACTAGTGTCAATCTGTTCACTTGTGATCAAGAATATGCAGAATCTGCTTGGAATTTGAATAACCTACCAGTGCTGGAAGGTAGTGTCCTTGGTCACATCAATGCAGACATAAGTGGGATGAAAGTTCCATGGATGTATGTGGGAATGTGCTTTGCTACATTCTGCTGGCACAATGAGGATCATTGGAGTTATTCTATCAACTACTTACATTGGGGTGAACCTAAAACATGGTATGGAGTGCCTGGTTCTGAGGCCGAAAAGTTTGAGCATTCAATGAAATCAGCTGCTCCTGAACTATTTCAAAGTCAACCAGATCTGCTTCACCAACTCGTCACGATCATGAATCCTAATATTCTCATTAATGAAGGAGTTCCAGTTTTTAGAACTGATCAACATGCTGGAGAATTCGTAGTCACGTTTCCCAGAGCTTACCATGCAGGGTTCAATCAAGGATATAATTTTGCTGAAGCTGTCAATTTTGCTCCTGCAGATTGGTTGAAGATGGGACGAGATTGCATATCTCACTACTCCAATCTCAGGCGATTCTGTGTTTTCTCACATGATGAATTGGTATGTAAGATGTCTTTGGAACCAGAGACGTTGGACATTGGGATTGCCACTGCTACATATCATGACATGCTAGCAATGGTTGAGGAAGAGAAGAAACTGAGGAAAAATTTGCTGGAGTGGGGTGTGACTGAGGCAGAACGTGAGGCTTTTGAACTCTTACCTGACGACGAGAGGCAATGTGAAGCATGTAAGACCACATGCTTTTTGAGTGCAGTGACTTGCGCTTGTCACAAGTCACAACTGGTTTGCTTGAGGCATTTCAAAAGCTTATGCGAATGTCCCCCAGAAAAACACACCCtccgatatagatatactctaGATGAACTTCCAATCATGTTGCAAAAGCTCAAGCTCAAAGCGGAGTCTTTTGACTCATGGGCAAGCAAGGTGAAAGAGGCTATGGACCCCAAGGGGGACAAAATAGAgttgaatgaattgaaagaattgCTGGATGAAGCTGAAGCAAAGAAGTTTCCTGAAAGTGAACTTCTTACAGCATTAACAACTGCTGTTCAAGATGCTGAAAAATGTGCAAGCGTTGCCAGACAGCTGTTGAGTAATAAGCAACGCACCAGGACTAGGCAGTCTGTTGATGCTAAATTCAAACTAACTGTTGAAGAACTCACTCTATTCTATCAAGAAATTACAAATCTTTGCTGTGAACTGAAAGAGGCAGACGGTGTCAAATACATTTTAGATCAAGTTCTGCAGTTCCAAAAAGACGCTGAAGAATTAGAAGCCGAAGATGTTGAGTGCGATTTGgagaaacttgaaaaatgtATTGAATATGGTGACTCGATCTGCATTGAACTTCCACAACTTCTGCGATTAAAACAGAAACTACAACAGATACATTGGTTAGAAGAGGTGAAATCAATCCAAGAAGAGCCTAAATCAATAACCAGACAAGATTTAGGTAGACTTATTGAGGAAGGAACAAACATACCTCCACATTCCTCTGTTGAAAATGCATTAGCTCAGCTACAAGCTCTGATGATTAATATTGATAACTGGGAAGATAAAGCTAAACTTTACCTTCAAGCCTCGAAGAATAGGCAATCAATTCTGGTTGTTGAAGAGCTCATAGCAGAGGCTAATAATATCGATGCTCATTTACCAGGCCTATCTAATCTCAAGGATGCTTTGAACAAAGCCAAGAATTGGACAAAACTTGTGGATGAAATCCAAGCGAAAGAAAACTTCCCTTACTACGATACACTGGAAGAAATTGTCCGCAAAGGCAGAACAATACCCTTACATTTGGCTTCATTACCTACATTGGAATCAACTCTAGCCCAGGCCAAATTGTGGAAAGAGAAGACTGCAAAGACATTCCTGAGGAAAAATTCTCCCTATTCATTAATGGAAGCTCTCTCTCCACGTATTGGAATAGGCTTACATGCGatgaaaaatcgcaaaaataaGGGTGATGATTCCATTGGAGCTGTTTATGTATGCGACACCCAGTTGGATGATTCCAACGACTCTGCCACTGTTGTTGCCGCTTTCAAATTAGCTGAACAGCGAGAAATGGAAGCGATGAAGAATTTGAGGGAAAGAAACATCCACAAAATACAACTTGACGATGCCAAATTTTGTACGTGTCGTCGGCCTAAGTTTGGACAAATGTTGCGGTGTGAGCTTTGCAAAGACTGGTTCCATGcaAGCTGTGTCCAATCCCACAACAATATCATTAAGAGCAAGCAACAAAACTCATCAATAATGAAGTTCTTATGTCAGTGCTGTTTGCGCTCACGAAGACCCCGTTTGGAGACGATCTTGACACTTTTAGTGAGTCTCCAAAAAATTCCTGTGCGATTACCCGAAGGAGAAGCTTTACAATGCCTTACAGAGCGTGCAATGAATTGGCAGGATCGAGCAAGACAAGCTTTGTCTGTTGAAGAGGTATCATCAGTATTATCAAAACTTAGCATGCTGTCTCAAAAACTTGCAGAAGCTGCTGCGAAAGAAAAGGCGGAGAGAATGGCAAATATGgatctgaaaaaagcatctaaTAGTTTGGATCCACCCCATAAAAATTCCGCTAACGCTTCCATGAGCAGTGCGCATTCTGATGACAGTGTCATAAGTATACCTgatgatgatgaaaaaatggatgaAGATGACGATATTGATAGTGATGATGATGTGTTAACTATTGATGAAGATGAGCCTAGCAGTAGTGTTTTTAATAGTAATGAGCACGCATACTCAACAGCATCCAAATTTTTATCTAAAGCTGGGGAAGAGAAGGACAGAATAGTAAACTTATCTACTAATGCAACCAAAATTTTGGAAGAGCTAATGATGGAAGGAGATTTATTGGAGGTTGCTCTCGATGAAACAGAACATATTTGGAGGATCCTCAGTCATATGAACACTGCGTCTAAAAGTGTTCGCAAGTATGCTCCTCTGGATCAATCCCTGCCAGATTCTGACGTCAAGAAGCAGACCGTTCCAAGGGGACGTAAACGAAAGTCTGATGACCTTGAGATCAAGAAAATGGGACGGCAGAAAACTGACGATAAGGCAATCGTTAAACGCAAAGGGTTGAACAGAGAAATGAAAACAACGCCAACATCAGGACCAATTAAACGTGGACCTCGCAAGATGAAACGGAAAGATGGCGATGAGTTACCGAAAAGAAGAACTGTAAATAGAAAAAAGACTAAACAAGACACTTCCGATGAAGAAGAAGACTGTGCTGCATTAAAATGTCTCAGGCCCAATGGTCGCGAAGTAGATTGGGTTCAGTGCGATGGAGGTTGCAATGGATGGTTCCATATGCACTGTGTTGGCTTGGATCGTACAGAGCTTGCAGAAGAAGATGATTATATTTGTAGTAATTGTGAGGCAGATGTCAACTCATCGAGTCATCTGGATTACCACTCATCGCAATCTTCTCAAGGCGAGCTCACAGATTTAGAAGATGATTCAGAGGAAGACATGCCAGAAACAGTCAGAGTGATTCGGATCTACTAA
Protein Sequence
MRMTARQSSSPRKQQPLPSTALPSETSAAGSTPQKNDFEFQAPPEAPVFEPTVDEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLRIPLVERKALDLYSLHRIVTDEGGVETVTKERRWAKIANKLGYPSGRSVGSILKSHYDRILYPFDVFKQGKTLTDIKIEPECDENEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGRQSALKQEECKEELDFDCKDDVKSKNSTDSKDCIKTRGAAAEKDKENSKELKKLQFYGAGPKMAGFVTKESTKKANKTRGIKLVYEFDPLAKYVCHNCGQGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFSMPVHMVPTHLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFEHSMKSAAPELFQSQPDLLHQLVTIMNPNILINEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRDCISHYSNLRRFCVFSHDELVCKMSLEPETLDIGIATATYHDMLAMVEEEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHKSQLVCLRHFKSLCECPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGDKIELNELKELLDEAEAKKFPESELLTALTTAVQDAEKCASVARQLLSNKQRTRTRQSVDAKFKLTVEELTLFYQEITNLCCELKEADGVKYILDQVLQFQKDAEELEAEDVECDLEKLEKCIEYGDSICIELPQLLRLKQKLQQIHWLEEVKSIQEEPKSITRQDLGRLIEEGTNIPPHSSVENALAQLQALMINIDNWEDKAKLYLQASKNRQSILVVEELIAEANNIDAHLPGLSNLKDALNKAKNWTKLVDEIQAKENFPYYDTLEEIVRKGRTIPLHLASLPTLESTLAQAKLWKEKTAKTFLRKNSPYSLMEALSPRIGIGLHAMKNRKNKGDDSIGAVYVCDTQLDDSNDSATVVAAFKLAEQREMEAMKNLRERNIHKIQLDDAKFCTCRRPKFGQMLRCELCKDWFHASCVQSHNNIIKSKQQNSSIMKFLCQCCLRSRRPRLETILTLLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALSVEEVSSVLSKLSMLSQKLAEAAAKEKAERMANMDLKKASNSLDPPHKNSANASMSSAHSDDSVISIPDDDEKMDEDDDIDSDDDVLTIDEDEPSSSVFNSNEHAYSTASKFLSKAGEEKDRIVNLSTNATKILEELMMEGDLLEVALDETEHIWRILSHMNTASKSVRKYAPLDQSLPDSDVKKQTVPRGRKRKSDDLEIKKMGRQKTDDKAIVKRKGLNREMKTTPTSGPIKRGPRKMKRKDGDELPKRRTVNRKKTKQDTSDEEEDCAALKCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICSNCEADVNSSSHLDYHSSQSSQGELTDLEDDSEEDMPETVRVIRIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
90% Identity
-
80% Identity
-