Eoch033582.1
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- ZFX
- Assembly
- GCA_949629135.1
- Location
- OX451414.1:5132672-5162740[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.078 7.6 8.2 0.5 1 23 247 270 247 270 0.92 2 11 0.013 1.3 10.7 0.1 1 23 277 299 277 299 0.98 3 11 1.6 1.6e+02 4.1 0.9 1 10 303 312 303 326 0.78 4 11 0.71 69 5.2 2.3 1 23 333 355 333 355 0.82 5 11 9.8e-06 0.00096 20.5 1.1 2 23 360 382 359 382 0.93 6 11 1.5e-05 0.0015 19.9 1.0 1 23 388 410 388 410 0.97 7 11 0.003 0.3 12.7 1.3 2 21 422 441 422 446 0.93 8 11 1.8e-05 0.0018 19.7 1.6 1 23 454 477 454 477 0.94 9 11 0.00085 0.083 14.4 0.3 1 23 482 505 482 505 0.98 10 11 8.7e-06 0.00085 20.7 2.8 2 23 513 534 512 534 0.97 11 11 8.6e-08 8.4e-06 27.0 1.4 1 23 540 563 540 563 0.97
Sequence Information
- Coding Sequence
- atggatATCAAAGATGAAAGTGTAACTTATAAACTGCTCTGCAATGCTTGCCTTTGTGTTGGGCGAAAGCTCTACAACATTACAGATgagaaaatgcaaaaatattaccTAAATGCTTTGGACGAAATTCCTCTGTGCAATTTGACTACTTTAAGACTGCAGGTTTGTTGGGAGTGTAAAGCCTTGCTAGAGAAAAGCATAGCCTTTAGAGAACAGGTCCAGGACTCTTACCGGATACTGCAGACTTATACTCAAGAGAATCTCCACGAATGTCTACTATCAGACGTGAGCCGTCCACCTCGCCTGAAGGTCCACTGCGCCGAACCCACCAGTATTTCTCCCTCAGATGGGTACGAAGCACTATCAACGTACCCGGAAGTACCCATTATTTGTGTTAAAGATGAACTTAAAGATGATTGGGATTGTGTTAATGATGACACAAACATCTTAGAAGATGACACGGGCCCTCTATCGGACAGCTCGGAAACCACGAAACATTACGAGTTGGAGGTACAAAGTATAATCTGCTCCATGAATAGGGATGAGAAGAGAGAGCAGGATAGCAAGACTAAAAGTAAAAGAGACAAGAAGATTAAGAGAGTTAAAGAGAATGAAAAAGTTAAGCTTAAACCTCCGAAAGAGCGAGACCAAAAGATACTAACCATAGAGTTGACATATGAAGAGATGTTATTAGAAAGAGATAAAGAATCGGCAAAGGACGCGTACACGAAGGCGGAGTATAAGTGTGAGAGCTGTCTCATTGGGTTTACTTATAAGAAGTCTTATTCCGCTCATGTGGCGGCCAAGCATTCGGCGGAATTAGGCGATTACATCTGTCCTATTTGCAAAACGATAATACCGTCTGTGGAATCATTTACAGCGCATTATAAAAGGCACATGAGAAGatatgAATGCAGTATTTGTCACAAAAGAACATTGGACATCAAAGTGATGCAACAACATTATTACTCGACGCATGAGATATCATTAAAGGAATATAAATGTAATCTTTGTGGGAAAATATCCAATTCCATAGACACCCACCGCTACCACAAAGACACGCACAAAGCAAGAGTACAGTGCACAGAGTGCGACAAAACGTTCAGACATAGAGCAGGACTGAAGAACCATAGACTGGCAGTGCATGAATGTCGGAACACGTTTCCCTGCACGATATGTGACAAAGTGTTCCGATGGAAAACTAGTCTCAAGCGGCATTTAGAGAAACATGAAGTACAGGGCAAGTCATCATCCGCTGCAGCATATTGTTCCATGTGTAACGTGAGCTTCTCGTCCATATTTTCGTACCAGAGACACATGAAGAACAGCCTCAAACATGTCTCACAGGATCAGCTCAAattcATCTGTGATCATTGCGACAAACGCTTCGCCGACAAGACGAAGTTGAGAGATCACATCGAAGAGAAACATTTACACAAGACGTATCAGTGTCAAATATGTCTGAAGCCGTCTAAAAATCGTGTTAGTTTGGACCAGCATATACGTAATGTGCACAAAGGAAGACCAAATAACAAGATGTGTCATCATTGCGGTAAAGGATTTCCTACCACGGTTCAGTTGGAGTCCCACATCCGCTCGCACACCGGCGAGCGACCATTCACGTGCGAATACTGTCCGACGACATTCTCACAGCAGTCCAACTTGTATAAACATATTAGACAGGTGCATCTCAACATAAAATCTAAACGCTATCCTATGTgcaagaagaaagaagaaaagctTCCAGACGTGCCCATACTAGACCATGTTCCACCCGTTGACCCATATAGGCCGATGCCAATGTTGCACTATACTACTGAAAAAGTTTTTGGAATGTGA
- Protein Sequence
- MDIKDESVTYKLLCNACLCVGRKLYNITDEKMQKYYLNALDEIPLCNLTTLRLQVCWECKALLEKSIAFREQVQDSYRILQTYTQENLHECLLSDVSRPPRLKVHCAEPTSISPSDGYEALSTYPEVPIICVKDELKDDWDCVNDDTNILEDDTGPLSDSSETTKHYELEVQSIICSMNRDEKREQDSKTKSKRDKKIKRVKENEKVKLKPPKERDQKILTIELTYEEMLLERDKESAKDAYTKAEYKCESCLIGFTYKKSYSAHVAAKHSAELGDYICPICKTIIPSVESFTAHYKRHMRRYECSICHKRTLDIKVMQQHYYSTHEISLKEYKCNLCGKISNSIDTHRYHKDTHKARVQCTECDKTFRHRAGLKNHRLAVHECRNTFPCTICDKVFRWKTSLKRHLEKHEVQGKSSSAAAYCSMCNVSFSSIFSYQRHMKNSLKHVSQDQLKFICDHCDKRFADKTKLRDHIEEKHLHKTYQCQICLKPSKNRVSLDQHIRNVHKGRPNNKMCHHCGKGFPTTVQLESHIRSHTGERPFTCEYCPTTFSQQSNLYKHIRQVHLNIKSKRYPMCKKKEEKLPDVPILDHVPPVDPYRPMPMLHYTTEKVFGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00121715;
- 90% Identity
- iTF_00375613;
- 80% Identity
- -