Basic Information

Insect: Eremobia ochroleuca
Gene Symbol: -
Assembly: GCA_949629135.1
Location: OX451413.1:6385256-6389418[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7e-05 0.0069 17.8 0.4 1 23 114 137 114 137 0.95

2 15 0.00016 0.016 16.7 4.3 1 23 140 163 140 163 0.97

3 15 0.00066 0.065 14.7 1.1 1 23 169 192 169 192 0.94

4 15 0.044 4.4 9.0 2.0 2 23 200 222 199 222 0.95

5 15 2.5 2.5e+02 3.5 0.7 1 23 227 249 227 249 0.93

6 15 1.6e-08 1.6e-06 29.3 0.6 1 23 255 277 255 277 0.98

7 15 0.0026 0.25 12.9 2.2 1 23 346 368 346 368 0.98

8 15 1.3 1.3e+02 4.4 0.0 2 23 394 416 393 416 0.91

9 15 0.85 83 5.0 0.4 3 23 440 461 438 461 0.93

10 15 0.00036 0.036 15.6 0.6 3 23 469 490 468 490 0.97

11 15 1.8e-05 0.0018 19.7 1.9 1 23 495 518 495 518 0.94

12 15 0.012 1.1 10.8 1.3 1 23 524 547 524 547 0.94

13 15 1.4e-05 0.0013 20.0 1.8 2 23 554 576 553 576 0.95

14 15 0.026 2.5 9.7 1.3 1 23 582 604 582 604 0.93

15 15 0.012 1.1 10.8 0.8 1 23 610 633 610 633 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7e-05	0.0069	17.8	0.4	1	23	114	137	114	137	0.95
2	15	0.00016	0.016	16.7	4.3	1	23	140	163	140	163	0.97
3	15	0.00066	0.065	14.7	1.1	1	23	169	192	169	192	0.94
4	15	0.044	4.4	9.0	2.0	2	23	200	222	199	222	0.95
5	15	2.5	2.5e+02	3.5	0.7	1	23	227	249	227	249	0.93
6	15	1.6e-08	1.6e-06	29.3	0.6	1	23	255	277	255	277	0.98
7	15	0.0026	0.25	12.9	2.2	1	23	346	368	346	368	0.98
8	15	1.3	1.3e+02	4.4	0.0	2	23	394	416	393	416	0.91
9	15	0.85	83	5.0	0.4	3	23	440	461	438	461	0.93
10	15	0.00036	0.036	15.6	0.6	3	23	469	490	468	490	0.97
11	15	1.8e-05	0.0018	19.7	1.9	1	23	495	518	495	518	0.94
12	15	0.012	1.1	10.8	1.3	1	23	524	547	524	547	0.94
13	15	1.4e-05	0.0013	20.0	1.8	2	23	554	576	553	576	0.95
14	15	0.026	2.5	9.7	1.3	1	23	582	604	582	604	0.93
15	15	0.012	1.1	10.8	0.8	1	23	610	633	610	633	0.90

Sequence Information

Coding Sequence: ATGCGGGACTGCGAGATCTTGAAAGAACATACCCAAAAACATTCTGTAGACCTTAACACTTTCATTGCAAAGAGAATTATTTCCAAAGATATACCAGTCAAAATTGATGTGGCGAACATAAGCTGTAAGTTGTGTATTGAAGAGCCTTTGAAAGATTTGGAAGAGCTAATTACTCATATAATTCTCACCCATGATGAGGATTATGATAGAGAGTTAGGCGTCTGTGCGTTACCCTTCATTTTAAACAAGGATGTAATGCAGTGCGTTCTCTGCGAGAATCAGTACGACAACTTCACCTGTATGGTGGGTCATATGCACAAGGATCATGTGAACCATTCGTTCATATGCCAGATATGTGGTCTAAGCTTTATTAGCAAGATTCGTCTCAAAAGACACATAAGCAATAGTCATGTAGGATATAGATGCACAGTTTGTGGAAAAATGTTTAACACTTCCCACAGGATGGAGAAACATAAGCAAAGAATGCACGGACAAGCTAAAACGCACGAATGCAGCCTCTGCAGTGCGACGTTCGAAAGCCAGTACCAATTAAAAGTTCATCTAGGAAAGATGCACAATGTGGAAAAGTACAGGATCAAATGTGAGCATTGTGCAAAAATTTGCACGACAAAGGGGGCTATGTTGCTTCACGTCCAATCTCAACATTCGCAATCCAAATTCGAGTGTGATTTATGCAATTATAAGACCGGAATTAAATGGTTGATTACTTTACATAAGAAAAAACATTTCGGGGACAGGGACTACGCTTGCAGTATTTGCGAGAGGTCTTTCCGCAGGTCTAGTAACTTGAGAGCTCATATGAAGGTCCATTCTGGAGAACTCAGAGGTCGCCAGGATACAACTGAAAAGCAGGCCGTCACCAATATATCTACCGAAGAGTACAATATTGCCATAACACAGTCTACCAGTAAACCAACCCTCACAGCGAAAGACAAAAGAAATATAATGagaaataatgtactacaggtCCTGATAAAATCTACCATCATGCCGTTCCGCTGGCTCAAAAGTTCATACAGATGTTTCTATTGCTACGAAATTTTCCAGGAGGCCTCCGAATTGAAAAGTCACCAGCACGTACATACGGGGACCGCGATCAAAGCACAAGCAATGAAAAACTATTGGGAGCCCGTTGTCTATGTCGATGTATCCAATCTATCGTGCAGCCTTTGTCCCGATAAAGTTACTGATCTATACGATTTAATCGACCATTTAATCGCGATGCATGGAGTGGAGTATAACAAAGATGTAGGGATATGTATGGTCGCTTTCAAGCTTGACAATTTTAATGTTAGCTGTCTCGCTTGTGGTGCGAATTTCTACACATTTGGGCCTTTACTACACCACACAAATAAGGATCACAAAGGTACGTCAGCTATACTTTGCGACGTCTGCGGCCAACATTTCAAAGATGCGAACTTACTTCGTCTTCACGTGAAATCTGTTCATGAAAACGCACTATTCCTTTGCACTGAATGCGGTGAAAAATTTGACTCCAAATCTAAACTGAAGACCCATCAGAAAAACAGCCACGATATGGAAAAAAAGTATAAGTGTGCAGATTGCTCAGAGGTTTTTCAAAGCCACTATAAGAGGTCTAGACATATGGCAGCCGAGCATAAGAATCGGCAAGAAATCAAATGTCCTCATTGTCCGAAGACCTTTGTCTTTAGAAGCATGATGATGACACATATGCGCGATTCCCATCTTAAATTCCGTAACCATATTTGTGGAGTCTGTGGCTGGAAGGCCTTCAACAGTAATCGGTTGAAAAACCACATGTATAAACATAGTGGGGAGAAGAATTTCAAATGTGAGGCCTGTGACAAGGCGTTTACTACTAAGAAGATAATGAAAGCTCATTTTGCGAGAATGCACAAAAATCCTCATCCTTCTATCATGCAATATGATAATCCTTATATTGGACAAGTTTAA
Protein Sequence: MRDCEILKEHTQKHSVDLNTFIAKRIISKDIPVKIDVANISCKLCIEEPLKDLEELITHIILTHDEDYDRELGVCALPFILNKDVMQCVLCENQYDNFTCMVGHMHKDHVNHSFICQICGLSFISKIRLKRHISNSHVGYRCTVCGKMFNTSHRMEKHKQRMHGQAKTHECSLCSATFESQYQLKVHLGKMHNVEKYRIKCEHCAKICTTKGAMLLHVQSQHSQSKFECDLCNYKTGIKWLITLHKKKHFGDRDYACSICERSFRRSSNLRAHMKVHSGELRGRQDTTEKQAVTNISTEEYNIAITQSTSKPTLTAKDKRNIMRNNVLQVLIKSTIMPFRWLKSSYRCFYCYEIFQEASELKSHQHVHTGTAIKAQAMKNYWEPVVYVDVSNLSCSLCPDKVTDLYDLIDHLIAMHGVEYNKDVGICMVAFKLDNFNVSCLACGANFYTFGPLLHHTNKDHKGTSAILCDVCGQHFKDANLLRLHVKSVHENALFLCTECGEKFDSKSKLKTHQKNSHDMEKKYKCADCSEVFQSHYKRSRHMAAEHKNRQEIKCPHCPKTFVFRSMMMTHMRDSHLKFRNHICGVCGWKAFNSNRLKNHMYKHSGEKNFKCEACDKAFTTKKIMKAHFARMHKNPHPSIMQYDNPYIGQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01535182;
90% Identity: -
80% Identity: -