Eoch024974.2
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- -
- Assembly
- GCA_949629135.1
- Location
- OX451403.1:14285711-14288089[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-08 8e-06 26.5 0.0 4 41 17 55 16 58 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGgcactacaaaagaaaaacaacaactACATACGACCTTGCAACTTTAAAAAAAGCTGTAGATGAAGTAAGAACTGGTAATTTAAACTCGTACCAAgcagcaaaaaaatacaatattcctCGTACGACTATATGTGATAGAGTGAATAACAGAAGAGGTGTCGTAAAGGACACTCCTTTACGACACCTCTTCTGTTATTCACTCTATCGTGGACCACCTACCGTGATTGACAGAGAAAATGAGCTCAAACTTGCAAATGGTCTACGGGTTATGGAAAAATACGGATTCGGACTTACTTCCAAAGAAACACTGGATTTAGTTAGCATACACGTGAgtcaaaataattacttaaccCCATTTAAAAACAACAGACCTGGGTATGATTGGTTCGCTGCTTTCAAAAAAAGACACaatttgtccttaaaaaagCCACAAGCAGTGGAGATGTCAAGAAAAGTAGCATGCGATCCTTTTATAATTAATGAGTACTTTGATGTCCTTGACGAGGTTTTGAATGAACTTGGTTTAAAAGGAAGACCAGAAAAGATTTGGAATCTTGATGAGTCAAGTTTTGGAAATGACCCTGATAAAACAAAAGTAGTTGGCGCCCGTGGATTTGCCAGTACACGAACGATCGCTTCATCTGGTAAAGATAATGTCACGATCTTGTTCACAGCCAGCGCCGCTGGTGACAAATTGCCTCCATTAATTATAAATAGAGGAAAAAATATGTGGGACCAATGGATGTCAGGCAATGGATACAAAAACACATCGTATGCTGCCACTAAAAATGGCTGGattgattcaaaagtattcgaaaagtacatgatcAATACTGTGCTACCGCATTTAGGCGAAGATCCACcagctttattaatatttgatggCCATTCTACccatattcaattaaaagttttagAAGAAGCACAAAAACGCAGAGTGACTATTATAAAGTTACCATCACATGCAAGTCATTTACTGCAGCCGTTAGATTTGTCGGTTTTCAAATCAATGAAAAACACTTGGGACGAAAAACTTGTGCAATGGCAACGATTGAATGTAGGTAAGAAGTTGCCAAAAGATGAATTTAGTCGCATTCTTGGAGAAGTGTGGCGCGACCTGAATCCACTTATCATTCGGAACGGTTTTAAAAAAGGAGGTATATACCCATTCAACAGAAACACTATACCAGAAGAAAAATATGACCCTGAATCATTGAAAAGATTCAAACAATTTCAAACACCAACAAAGGAAATTCCTTCTTTGAAAGAGCTAAGTTTGCAAGTGGTGCTCCTCAGGATGAACAGGTGTCAGGACGAAGAGAATACACAAAGGAACATAttgaaagaaaacaataaaacgtTCAACGTTCATGTAGAAGGCAATAAAACTTCAAGTCCTCAACTAACTTTGATAGCAGCGTCTTCCAAATTGCCTTTGAACAGTCAAGGAATGCGATTTGATAACTCTAATGACAAACCCAGAATCAAGATTATTGAAGATCGAATTTTGTCTCCCTCAGAAAAGTATTCTTTTGAATCTTTACTATTGCAGAGAATAAAACGAAGTGACACTACAGTGAAactgaaaaaaacaaaagtgtcaaAAGGCTGTGAAGTAATCACAAGGGAAgagtttttagaaaataaaagaaaggaagaggaagaaaaaataattaaagaagaacATAAGAAAAAACCcacgaaaaaagaaaacaaagatcCCCAATCCAGAAAGAAAGCAAAATGTACCAAATCATCAGAAGAGAGCTTAAAGGCCGAAAATAAATCTCATATACCAAAGAAGAAAAAGACTGATCAAAAATCTAAAAAGAgagtgaaaaaacaaaaaaagtgtgTTGATTACGATGAAGAATCTGAAGATGAAACAGATATTAGTTTTGCTGAATCTTCTCTAACCTGTGAAGAGTTTGATAGTGATCGTGAACAGTTTTTCGCAGAAATGGAAGATCTTGATGATTTGCTGCCGAGCACAGAAAATGTAAATGACGATTGTTTATCAAAAAATgatgcaaaaacaatttttaaaactaaTGACGAATTTGAACCGGATGTCAGCAAAAGGAATCCGGAAATTCACGACTGGATACTAGTGAGATTCACAACGAAAAAGTCTGTTAAGTATTTCGTAGGTaacattatttctattaatGACGAAAATATACCCAACGTGAaatttttgagaaaaataaagaacaGTAGGTTTATGTCTTTTCATTACCCAGACGTGGAAGATATATCGGAAGTAAAACATTACGATGATGATATTGTAATGTTCCTTAAGAAACCTGATATATCCCGCAGAGGCCATGTTAcgtttaaagaaaattttaaaaattacaacATTCAGTGA
- Protein Sequence
- MVRHYKRKTTTTYDLATLKKAVDEVRTGNLNSYQAAKKYNIPRTTICDRVNNRRGVVKDTPLRHLFCYSLYRGPPTVIDRENELKLANGLRVMEKYGFGLTSKETLDLVSIHVSQNNYLTPFKNNRPGYDWFAAFKKRHNLSLKKPQAVEMSRKVACDPFIINEYFDVLDEVLNELGLKGRPEKIWNLDESSFGNDPDKTKVVGARGFASTRTIASSGKDNVTILFTASAAGDKLPPLIINRGKNMWDQWMSGNGYKNTSYAATKNGWIDSKVFEKYMINTVLPHLGEDPPALLIFDGHSTHIQLKVLEEAQKRRVTIIKLPSHASHLLQPLDLSVFKSMKNTWDEKLVQWQRLNVGKKLPKDEFSRILGEVWRDLNPLIIRNGFKKGGIYPFNRNTIPEEKYDPESLKRFKQFQTPTKEIPSLKELSLQVVLLRMNRCQDEENTQRNILKENNKTFNVHVEGNKTSSPQLTLIAASSKLPLNSQGMRFDNSNDKPRIKIIEDRILSPSEKYSFESLLLQRIKRSDTTVKLKKTKVSKGCEVITREEFLENKRKEEEEKIIKEEHKKKPTKKENKDPQSRKKAKCTKSSEESLKAENKSHIPKKKKTDQKSKKRVKKQKKCVDYDEESEDETDISFAESSLTCEEFDSDREQFFAEMEDLDDLLPSTENVNDDCLSKNDAKTIFKTNDEFEPDVSKRNPEIHDWILVRFTTKKSVKYFVGNIISINDENIPNVKFLRKIKNSRFMSFHYPDVEDISEVKHYDDDIVMFLKKPDISRRGHVTFKENFKNYNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023649; iTF_00023650; iTF_00023651; iTF_00023652; iTF_00023653; iTF_00023654; iTF_00023655; iTF_00023656; iTF_00023657; iTF_00023658; iTF_00023659; iTF_00023660; iTF_00023639; iTF_00023640; iTF_00023641; iTF_00023642; iTF_00023643; iTF_00023644; iTF_00023645; iTF_00023646; iTF_00023647; iTF_00023648; iTF_00677542; iTF_00161493; iTF_00667353; iTF_01221473; iTF_00667350;
- 90% Identity
- iTF_00677542;
- 80% Identity
- -