Eoch015898.1
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- -
- Assembly
- GCA_949629135.1
- Location
- OX451395.1:4765351-4785546[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-14 5e-12 46.4 0.1 1 36 409 444 409 449 0.93
Sequence Information
- Coding Sequence
- atgcAAAAGGGCATCTCAGATTGCGTTATTACTGATTTAAAGAACAAAGACACTTCAGCAGTTTGGGAGCATTTTCTTAGACACGAAGATAAATCAAATGTAGAATGTAAATTATGTCATGAAGAGTTTCAATACGACTCTGGTTCTACATCGGAGTTGGAGAACCACTGGGCAACGAAACACGAAATACAATTCAAAAACAATTATATTGTGGAGGTCAAAGTGGAAGAAGATGCAGAAGAAGAAGAGGAAATGAAAGAATTAACGAAAAAAATGGAGTTTTCAGAATTCAAGCCTGACAGAAAGGCCTTTTCAGCAGTGTGGCAGCATTTTCTTGTAAGCGAAGATAAAACTTACGCCAAATACGGCGAAGAGTTAGCCGACGGCGAACTAACGAGTCCCCGGAGGTACACTTCTGCAGTCTGGAAAAGTTTTGTCAGAAGTGAAGACAAAAGTCACGCTAAATATAAGCAGATATCAGATTCCGTCTATGATTTAAAGAGAAAAGGTTCTTCAGCAGTTTGGGAGCATTTTCTTAGAAACGAAAATTCATCGATTGCAGAATGTGAATTATGTCATGAAGAGTTTAAATACACTGACTATACATCAGAACTGAAGAAGCACTTGGCAATGAAACACCATATAAAATTGGATACTATCAAAAGTCTTTATTTTGTCGCCGTTGATGGTCAAGaaaaggaGTTTTCAGACGTCTTAAAATTTTACAGGAGAGAAAATGTCTCCGCAGTCTGGAAGAACTTTCTTAGAAGCAACGACAAACTCTATGCGAAATGTAAACTGTGTTGCAAGGTGTTAAAATACCACGGTACATCGTCACTGAGACGTCACTTTGAAGCAAAACACGATCAAGGAGAAGCAACTGAAAATATTGTGTATATTGTCAATGTCGATGAGGAAGATACAGAAAATGAAGacgaAGAGGACTTTTCAGACCCAAAACTGAATCATCCGAATACAGAGCCCTCTCCAGTTTGGAAATATTTTCTCAGAAGTAAAGACAAACTCCGGGCAAAATGTAAAGTTTGTCACAAAGTGATAAAGTGCGCCAACGGCTCCACTTCAGGATTACTGAGGCATTTaccaaaacatttaaataatcaaGCGTCTACGAGAAAAAGTCCTGTAATCAAGgagaattatataaaaaatgtcGATGAGGAAGggCAGTGGTCTGGTCCATCGTTACGAGGCTCGTCGGCGTGGACCGAAGAAAGCATCGCAGCAGCGGTTAACGCTGTCATCAGTGGTCAGATGTCAACGTATAAAGCTTCTGAACGCTATGGCATTCCGAGATCGACCGTCAGAAATCGTGTGGGACTTGAGAAATTTCGAAAGTCTTTAGGAAAACCATCAAAAAACTGA
- Protein Sequence
- MQKGISDCVITDLKNKDTSAVWEHFLRHEDKSNVECKLCHEEFQYDSGSTSELENHWATKHEIQFKNNYIVEVKVEEDAEEEEEMKELTKKMEFSEFKPDRKAFSAVWQHFLVSEDKTYAKYGEELADGELTSPRRYTSAVWKSFVRSEDKSHAKYKQISDSVYDLKRKGSSAVWEHFLRNENSSIAECELCHEEFKYTDYTSELKKHLAMKHHIKLDTIKSLYFVAVDGQEKEFSDVLKFYRRENVSAVWKNFLRSNDKLYAKCKLCCKVLKYHGTSSLRRHFEAKHDQGEATENIVYIVNVDEEDTENEDEEDFSDPKLNHPNTEPSPVWKYFLRSKDKLRAKCKVCHKVIKCANGSTSGLLRHLPKHLNNQASTRKSPVIKENYIKNVDEEGQWSGPSLRGSSAWTEESIAAAVNAVISGQMSTYKASERYGIPRSTVRNRVGLEKFRKSLGKPSKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667719;
- 90% Identity
- iTF_00667719;
- 80% Identity
- iTF_00667719;