Eoch000860.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eremobia ochroleuca
Gene Symbol
Jarid2
Assembly
GCA_949629135.1
Location
OX451384.1:3294906-3300245[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-20 1.8e-16 61.4 0.1 13 89 584 657 573 657 0.90

Sequence Information

Coding Sequence
ATGGCGACGCGATTAAACGTATACAATTCTAGCTCCAAAGAATATGACGTGGTCTACTCTGATCAGCCAATGCACTTACGAAAAGCCGCGGATAAGTCTGTCCGTCTTGAGCGTGCTCGAAATGTTCAGTCTGAAAAACTCACGCAATTCGTTGGGGTAGGGTATCCCTCTAGCGACGCGAATGAGCGTGCCCTTATAAAAAATTTGAGAAATACAGCAGTCAATTTTGAGCGTACTCAAAATGTACAGTCGCAGTCACCAACGCCTTGCATCGCCGCAGAGCGTCGCTCTAGCGACACGGATGAGCATGTCCTCATGGAAGTCATGGAACATAAAGAAGCCAATCTCGAACGCACTCAAAATGTTCAGTTGGAAACACCAATGCCTTGTGCCGCGGCAGCGTGTCGCTCTGACAAGGACGTCATAAACGCATCTAAGGTATTCCTGGACTCACGCTGCAAAGTGTGTAAGCCTTGCATCAGAATTGACAAACTGATGAAAGTTTCGGCTTTACTAGAATCTCAGATTGGATTATCGAGCAAGGGACTGCAAAACAACGCCACGATTACAGAGAACGAACTAACAGAAAGAGAAGGTGAAACAGAAGACGTTGAAATAGAAATCGATGACGCCAAGTCGACTAACGAAGACCCAGGTAATATTTACTTGCTATTACCAAACCAATCTTCCATTATGATGAAATTAAGAGCCCACAAGGTACACGGCAAAGAGGTCTTGGGGGTCGGTTTGATCCCGAAAAATGAATCTCTGATAAACAAAGAGTTTTCCTTGGAGGAGCACGAACCTTTACTTGACCAAATTATCGAGAACCTGACAATCTATAGAGACGTCAATTTTGAGGGTCAGGACGTAAATTTGATGAGTCGAAACGTCAATTTGGAGGGTATTGAAGTCAATTCGGAGGTTCGAGACATTTGTATTGTCACAGAGGTTCGAAGCGACAACACAAAGGGCCGAAACGACAATTTGGAGAAGAGAAACGACTTTCCGGCTAGTCGACCGGTTAGCATATCATCCGACAGTACGGGTGAGATAAGCGATGATGACCAAAAGATGCCAACCCGCCATACAGCTGAGAAAAGACGGTTAAAGCGCATGGCTTCTAGAAAGAAGTTAGCTATGATGCACGAGCGCATGAGAGCGGAAAAAGAAAGAGAGATCGCTCGCGTCGAGGAAGAGAATAGACAGGAATTAACACGGATTACGTTGGAGATGAATAACGCTGTCGCGGAGATGTCCCGCTACCACGAGCGGTTTACCCAGATGGAGAAGGCGAAAGAAAGACATGTTGCTCTCCTCAAGGAGAAGATCAGAGAAGATGTAATATCTAAAATAGAGGCTACTCGCCTTATGTACACTGAAGTCGACGGCATGGCGGCGAAACTTGACAAAGAAAAGGATGCCAAAAAAATGGATCTGGAAGAACTTTCAGATCAAGATGCGCCTGGCACCAGCAGCTCCATTCTTCCAACGGATGGTGGGTTGCTAGTAGAAGCTCCTATATACCACCCTAGCGAGGAAGATTTTCAAGATCCACTTGGCTACTATGAGAGGATCTGGGCAGACGCAGTTAGATTTGGCATCTGTAAGGTGGTGCCCCCTCCTGGTTGGAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCGCGATTATTCAACCGCTGGGGACCGGCCGCGAGAGAACTCTGCGCGATCAAGTTGTCGCTGGCCCAACAAAAAGTTAATTTTACACGACCACCGTTGCTGGATGGTGTCGAGGTAAACTTGCCCAAATTATACCACCTCGTGCAACGGCACGGCGGCCTAGAAATTGTATATAACAAGAAGCGATGGGGCAAGGTCGCGGAAGatatgaaatttaataaaggaCCTAATACTGAGCGGAAACTAGACCAGATTTACGTAAAGTATTTGCTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGAAATCATGCGGAAAGTCGAGATCGCGTGGAACCGAAAGAATCAAAAGCTTTTGGAGCGCGCCTTGAACCCATTAAAACGCCAGCAGCGATTGCTTGGCTTAATAGACTCTTCTGACGATGAGACAGAAGACGAAGACACGCTGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTCATGAACCGTGCTAAATTCAAAAAGATTGCCACCATGACGTACGAGAACATATTCGGACCAGGTTCGGAGTCCGCCGACCCTCCAGATTTGTCCAAAATCGAGGACTACTACTGGCGCCTCGTGACGCTGGGCGCCGAGCACGTGTGCGTGCACACCGCGGCCGTTGACACCGGCGAAGAAGGCTACGGCTTTACCAAAAATACGTCTGACTCCTATGGACGCCACCCTTGGAATCCTAAGGTACTTTTCACTACTCTTCTCATACTGGTAGTATGTACAATGTGTCCCAAAATTCAACGATAA
Protein Sequence
MATRLNVYNSSSKEYDVVYSDQPMHLRKAADKSVRLERARNVQSEKLTQFVGVGYPSSDANERALIKNLRNTAVNFERTQNVQSQSPTPCIAAERRSSDTDEHVLMEVMEHKEANLERTQNVQLETPMPCAAAACRSDKDVINASKVFLDSRCKVCKPCIRIDKLMKVSALLESQIGLSSKGLQNNATITENELTEREGETEDVEIEIDDAKSTNEDPGNIYLLLPNQSSIMMKLRAHKVHGKEVLGVGLIPKNESLINKEFSLEEHEPLLDQIIENLTIYRDVNFEGQDVNLMSRNVNLEGIEVNSEVRDICIVTEVRSDNTKGRNDNLEKRNDFPASRPVSISSDSTGEISDDDQKMPTRHTAEKRRLKRMASRKKLAMMHERMRAEKEREIARVEEENRQELTRITLEMNNAVAEMSRYHERFTQMEKAKERHVALLKEKIREDVISKIEATRLMYTEVDGMAAKLDKEKDAKKMDLEELSDQDAPGTSSSILPTDGGLLVEAPIYHPSEEDFQDPLGYYERIWADAVRFGICKVVPPPGWKPPFRVHDEMRFDVMNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLEIVYNKKRWGKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHQERQEIMRKVEIAWNRKNQKLLERALNPLKRQQRLLGLIDSSDDETEDEDTLAAVNEAEDCIIKGAVMNRAKFKKIATMTYENIFGPGSESADPPDLSKIEDYYWRLVTLGAEHVCVHTAAVDTGEEGYGFTKNTSDSYGRHPWNPKVLFTTLLILVVCTMCPKIQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-