Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949629135.1
Location
OX451390.1:12492348-12494783[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.8e-23 3.2e-19 70.1 0.1 3 89 94 176 92 176 0.93

Sequence Information

Coding Sequence
ATGGATAGCAAGAACATTCAGAAAAATGCCATGCATAAAAGTGCAGAATTCACTTTCACACCACCACCAGAAGCCCCCGTTTTCGAACCTACGCCTGAAGAATTCTTGGATCCACTTGGATACATAGCTAAAATCCGCCCAGTTGCAGAGAAAACGGGCATCTGCAAAATAAAGCCTCCGTCGCGCTGGCAGCCACCGTTTTCATTAGACGTGGacaaattaaaatttgtccCGAGGATACAGAAAGTGAACGAGTTGGAAGCCATTACACGTCTAAAACTTTTGTTTCttgagaaaattttaaaattttgggaACTCCAAGGATCGCCATTAAAAATTCCAATgattgaaaacaaaacattggATTTGTACTGTCTCAAATTTTGGGTAGATGAAGAGGGCGGCTTCGAAGGCTGTAACACTCCTAAAAAATGGCGTAAGATTGCAAGCGCGATGGGTTACAGTCAGCACATGAGTACTATGAATTTTCTTAGAAGTAATTACGAAAAAATTTTGCTCCCCtatgaaatatttgaaaaaagtaaagcagatatattaaaaactgttaAGAAGACTGAAcccaaaattgaaataaaagaagATGAAGTTGGAAAGCCTCAGATCACAGAAGTACCTATAGAAACGATAACAAAGATCAAAGTAGATTATAGAGAGGAGAAACCTCACAcaagtattaagaaaacaaaGACAGGATCTGATATCAAACCAGATATGGATATTTCTAAAATTAAAGTTGAGAGTGAAGAGATAAAACGCAGCAGAGAACTAAGAAGGTTAGCTTGCTACGGACCTGGACCAAAAATGCCTGGACTGAATGATGAAGAatttgatattacaaaatcaAGGAAGAGGCCCCGCTATGATCTTGATCCATTAGCAGTTTATCAGTGTGCTATTTGCCAACAAGACCATAGGGATGATATGCTGTTAATTTGCAGTGGTTGTTCTGAAACCTATCATACATTTTGTTTAAGACCTCCGCTGTCTATGGTGCCAGATGGTGATTGGCGTTGCCCTTGTTGCATTTCTGAGGAGGTTCACAAACCTGCTGAGGCATTTGGATTTGCTCAGGCAGAAAGAGAATACACATTGCAACAATTTGGAGAAATGGCAGATAAATTCAAATCTGACTATTTTGCCATGTCTGGGCATTTAGTCCCGACGACAGTGGCTGAAAAAGAGTTTTGGAGAATTATTTCTTCAGTGGAGGAAGATGTAACTGTAGAGTATGGTGCTGATCTTCACTCAATGGATCATGGATCAGGCTTTCCAACTAAATCTTCACTAAATCTTTATCCTGGTGATCAAGAGTATGTAGATTCAGGATGGAATTTAAACAACCTGCCCGTTCTGGATGGGTCTGTTTTAAGATTTATAAATGCTGACATATCTGGCATGACCGTGCCTTGGATGTATGTTGGTATGTGCTTTTCGGCATTTTGTTGGCACAATGAGGACCACTGGAgttattcaattaattatttacattggGGTGAGGCCAAAACTTGGTATGGAGTGCCAGGCAGTGGCGCAGAATTATTGGAAACAGCTATGAAAGCAGCAGCACCTGATCTATTTAAATCTCAACCAGATTTGTTACACCAACTTGTAACAATAATGAATCCAAATATTTTGATGGCAGCTGGGGTACCAATTTATAGGACTGATCAGAATGCTGGAGAGTTTGTGGTCACATTTCCCAGAGCATACCATGCTGGTTTTAACCAAGGGTATAACTTTGCCGAAGCTGTTAATTTTGCCCCACCTGACTGGCTAAAAATTGGACGTGAGTGTATAAATCATTACAAAAATCTCAAGAGGTTCTGTGTCTTCTCTCATGATGAATTGATTTGTAAAATGGCATTGGAAGGGGATCGGTTAGATTTGGAGACTGCACTAGAAACACAAAAAGAATTAGTTAAAGCCACAGCGGAAGAAGGATCTTTGAGAGCTTTAATAGCTAAGAAAGGCCTTAAGAGTGTGCGTAGGACTGCATTTGAGTTGCTTGGTGATGATGAAAGGCTATGTGAAGTGTGTAAAACGACATGTTTCCTATCTTCAGTGTCATGTAGCGATTGTAAACACATGGTCTGTTTGCAGCATACAGGTAACTTATGTCAATGCCCACTGGAGAAAAAGACATTGAACTACCGTTATGATATGGATGAGCTGCACATTATGCTACAAACTATAGATTTTAGAGTCAATAGTTTTGACAAGTGGATGTCTGAAACTAAGAACATACTACTTCCCACTGCTCCTGATATTGGAAGACTTCAAAAGTTAAAAGTTTTGATAGATGAAGCAGAGGAACTCAAAATACCAAAGTGTGCATTTTTGTCACAATTGAAGGAGGAGTATACAAAAGCAACAGAAAATGTTGAACCAATAGTTATAGAATTAGATGATGATTGA
Protein Sequence
MDSKNIQKNAMHKSAEFTFTPPPEAPVFEPTPEEFLDPLGYIAKIRPVAEKTGICKIKPPSRWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWELQGSPLKIPMIENKTLDLYCLKFWVDEEGGFEGCNTPKKWRKIASAMGYSQHMSTMNFLRSNYEKILLPYEIFEKSKADILKTVKKTEPKIEIKEDEVGKPQITEVPIETITKIKVDYREEKPHTSIKKTKTGSDIKPDMDISKIKVESEEIKRSRELRRLACYGPGPKMPGLNDEEFDITKSRKRPRYDLDPLAVYQCAICQQDHRDDMLLICSGCSETYHTFCLRPPLSMVPDGDWRCPCCISEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFAMSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAELLETAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQNAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKIGRECINHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVKATAEEGSLRALIAKKGLKSVRRTAFELLGDDERLCEVCKTTCFLSSVSCSDCKHMVCLQHTGNLCQCPLEKKTLNYRYDMDELHIMLQTIDFRVNSFDKWMSETKNILLPTAPDIGRLQKLKVLIDEAEELKIPKCAFLSQLKEEYTKATENVEPIVIELDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487498;
90% Identity
iTF_00783207;
80% Identity
-