Edef024936.1
Basic Information
- Insect
- Erannis defoliaria
- Gene Symbol
- stc
- Assembly
- GCA_905404285.1
- Location
- FR990076.1:3653139-3666766[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.00022 3.1 8.6 6.8 1 13 33 45 33 45 0.97 2 7 0.0069 97 3.8 0.3 2 10 46 54 46 54 0.94 3 7 2e-08 0.00028 21.5 13.6 1 19 60 78 60 78 0.99 4 7 0.45 6.4e+03 -2.1 0.7 6 10 107 111 106 111 0.86 5 7 0.0037 52 4.6 15.8 1 18 117 133 117 134 0.85 6 7 1.6e-08 0.00023 21.7 14.1 1 17 170 188 170 194 0.85 7 7 0.0013 18 6.1 12.1 1 19 200 223 200 223 0.88
Sequence Information
- Coding Sequence
- ATGGAAACTGTTCTCCAATTTGTTTACATTCTTTTGACCAGAAAATACCATAGGCATTTTGGTGGGCGGTATGTACCGTTACCGGCGAAGCTGTCGTGCGGCCGGCACCGGTGCCGCGCGGCGTGCTGCGCGGGCGGCGCGCACCGCTGCGCCGTGCCGTGCGGCCGCTCGCTCGCGTGCGGCGCGCACCGCTGCGAGGACTTCTGCCACACCGGGCACTGCGCGCCCTGCCCGCGCGTCAGTTTCTCCGAGCTGACGTGCGAGTGCGGCGCGGTGGTGGTGCTGCCGCCGGTGCGGTGCGGCACGCGGCCGCCGGCGTGCGAGGCGCCGTGCCGCCGCGCGCGCCCCTGCGGCCACGCGCCGCACCACTCCTGCCACTCCGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCTACGGCGACCACGAGGAGCGTAAGACAATCCCGTGCTCCCAAGACGAGTTCTCGTGCGGGCTGCCGTGCGGCAAGCCGCTGTCGTGCGGGAAACACACCTGCATCAAGACCTGCCACAAGGGACCCTGCGACACTGCCAAATGCACGCAGCCTTGCATGGAGAAGCGTCCGTCGTGCGGGCACCCGTGCGCGGCGCCGTGCCACGCGAGCGAGGGCGGCGAGTGCCCGGCCGCGGCGCCGTGTCGGCGGCTGGTGCGCGCCGCCTGCCCCTGCGGCCGCCGCCACGCCGACCGCACCTGCAGCGACAACGCGCGCGACCTCGCCAAAATGATGAGCACGTTAGTTGCGACAAAAATGCAAGAGGGAGGATCCGTCGACCTCTCCGAGGTCCAACGTCCCACGAACATGCTTAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCGGCGAAGCTGGCGCCGCGGTACAACGAGACCCTGCGCGCCACGGCAGCGCGCGAGCCCGCCTTCGCGCAGCAGATACACGACGCGCTCACCGACCTCTCGAAGCAGAAGACCCGCTCGCACTCGTTCCCGAGTATGAACTGGCAGAAGCGCCAGTTCATCCACGAGCTGTCGGAGCACTTCGGCTGCGAGAGCGTCGCGTACGACGCCGAGCCCAACCGGAACGTTGTCTCTACTGCCGACAAAGAGAAGTCGTGGCTGCCCGCGATGAGTGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCTGCGCGCGCCGCCCTCCGCGCTCAGCTCCTCCCGCTCCGCAGCGGCCGCTACCGCGTCCAACAAATCGTCTGGAGGCGGATGGGCGACGCTGACGTCATCGAACGCGTGGGCGGCGCGCAGCCAGCCCAAGCAAGCCCCGCCCGAGGCCAAAATAGACTACTTCGACAACCCGCCGGACAACTAG
- Protein Sequence
- METVLQFVYILLTRKYHRHFGGRYVPLPAKLSCGRHRCRAACCAGGAHRCAVPCGRSLACGAHRCEDFCHTGHCAPCPRVSFSELTCECGAVVVLPPVRCGTRPPACEAPCRRARPCGHAPHHSCHSGDCPPCVVLTTKRCYGDHEERKTIPCSQDEFSCGLPCGKPLSCGKHTCIKTCHKGPCDTAKCTQPCMEKRPSCGHPCAAPCHASEGGECPAAAPCRRLVRAACPCGRRHADRTCSDNARDLAKMMSTLVATKMQEGGSVDLSEVQRPTNMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYNETLRATAAREPAFAQQIHDALTDLSKQKTRSHSFPSMNWQKRQFIHELSEHFGCESVAYDAEPNRNVVSTADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPSALSSSRSAAAATASNKSSGGGWATLTSSNAWAARSQPKQAPPEAKIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -