Basic Information

Insect: Erannis defoliaria
Gene Symbol: -
Assembly: GCA_905404285.1
Location: FR990078.1:16012790-16027090[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0041 0.36 12.0 1.7 1 23 236 258 236 258 0.99

2 11 0.021 1.8 9.8 3.7 1 23 265 288 265 288 0.94

3 11 3.6e-05 0.0032 18.5 0.1 1 23 319 342 319 342 0.97

4 11 0.00016 0.014 16.5 2.7 2 23 347 369 346 369 0.94

5 11 0.22 19 6.6 0.0 2 20 380 398 380 400 0.94

6 11 9.9e-06 0.00087 20.2 0.2 3 23 410 430 410 430 0.99

7 11 0.0042 0.37 12.0 0.1 2 23 444 466 444 466 0.95

8 11 0.00035 0.031 15.4 4.5 1 23 483 505 483 505 0.98

9 11 0.0028 0.24 12.5 0.0 1 23 511 533 511 533 0.96

10 11 2.5e-07 2.2e-05 25.3 1.4 1 23 538 560 538 560 0.96

11 11 8.5e-05 0.0075 17.3 2.1 1 23 566 589 566 589 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0041	0.36	12.0	1.7	1	23	236	258	236	258	0.99
2	11	0.021	1.8	9.8	3.7	1	23	265	288	265	288	0.94
3	11	3.6e-05	0.0032	18.5	0.1	1	23	319	342	319	342	0.97
4	11	0.00016	0.014	16.5	2.7	2	23	347	369	346	369	0.94
5	11	0.22	19	6.6	0.0	2	20	380	398	380	400	0.94
6	11	9.9e-06	0.00087	20.2	0.2	3	23	410	430	410	430	0.99
7	11	0.0042	0.37	12.0	0.1	2	23	444	466	444	466	0.95
8	11	0.00035	0.031	15.4	4.5	1	23	483	505	483	505	0.98
9	11	0.0028	0.24	12.5	0.0	1	23	511	533	511	533	0.96
10	11	2.5e-07	2.2e-05	25.3	1.4	1	23	538	560	538	560	0.96
11	11	8.5e-05	0.0075	17.3	2.1	1	23	566	589	566	589	0.96

Sequence Information

Coding Sequence: ATGATCACTTCCAATAAACAACTACAATCAAATTTTTGTTTTGAGTGTGCTGCGCTCTTACGAAAGTTTGAAAAATTCAGGCGAAAATGCTACATAGCGCAGGAAGTTTTATCGAAGCTCAAACAAAGTAATTCTGAGCTAACATTGGCAAACATTCGTAATCTAGACAGAAAACAACACAAGTTGGCATCAACAATTACTCTAAATACTTTAGATTGTATTACAATAGAGGGTTCCCAGATTAATAATGCCAATTTTAAAGAAGAAACCTTTACTACTTGTAAAGATAAGCTAAATTTTAACAACCATACTATTGAGTCTGATACACAAGAAATTAAACATGAAACAAAGGTTGAAAAAGAAAGTTTTCATGATCATAATGATGAAATAAACAGTATAACAGAAAAATATGATTACAAAAATAAAAAACGAAAAACACCAAATGGCATAACAGAAAACGGAAGCAAAAACAGAAAAGCTAGCAAAACAAATAGCTTTGAATCTGCAAGTGATGACGAACCTTTAGCGAATAAGATAACTAAAATAAATGAAAACTCAGAAGTAAACAGAGTCAGCAAAACCAGTCATAAAAAATTTAGCCTAAAATACTTTGAAGAATATGCAACAGTGGTGTTTTTAAGTCCAGAAGAGGCTAAGAAGGAATTACTGTTAAGAAAAGAATCTAATAATTATCTGAACTCTCCGTTCAAATGCAAATTCTGCTATAGAGGGTTTGAAGCTGAAGCAACTTATGAAAATCATATGAAAAAACATAGCAATGAGAATGGCGAGTACGAATGTGACATCTGCCGCCTCAGGTTCCCGGAGCAGCGCTGCTTGTGCAAGCATCGCCTCGCGAGCCACAAGCGCAAGTTCAGCTGCAAACTCTGCTCATATGTTTGCTTCTGCACATATCAAGCCAAGACCCATGTGAGTCTTCACAAAGGGAAGAAATATCCTTGCGAGGACTGTGGAGAAATATTCAGCATGCCTAACAGTTTGTTCATGCACAAGCGCGTGAAGCACGTGACGGAGTGCGTGTGCGATCTCTGCGGGAAGACGTTCGCGACGCCGCGCGGCCTCTACTCGCACCACATGAAGACGCACAGACTGGACAAGAATGAGAAGCGCGGTCCGAAATGTGAAGAGTGCGAAATACAGTTCGCAACTGAAGAGGCTTGGAAACTGCATCTGGTGCTCTCATCCAAACACAAAGTGAGTAACGGCTGCAAGTACTGCGGCGAGGCGTTCCCGACCAGCGAGGGTTTGAAGAGTCACACCAGGGTCCACTCCAGGAAGCGGGGCCGGCAGGACCTCAAACTGCCCGCCTCTTGCACTATCTGCGGCAAGTACCTGGCGACCGTCCCCGAGTACAAGTCGCACATGCGCGCGGCGCACCCCGGCTCCGGCGCCGCGCGCGCGCTGCAGGCGGACCGGCGCGCGCCCTTCGTCTGCGAGACCTGCGGGCTGGCCTTCAAGAAGCAATGTTTCCTGAAGTACCACCAGCGGAAGCACACGGGCGAGCGTCCGTATGCGTGCGCGCAGTGCGACAAGACGTTCCAGCTGGCCGGCGCGCTCGCCTCGCACCGCGCCGTGCACGCGCGCCGCGCGCACGCGTGCCAGGTCTGCGGCCGCGTGTTCACCTTCAAGAGCGCGCTCAACAAACACATGAAGGTCCACCTGAACATCCGGCCGCATCGGTGCGACATCTGCGATAAGTCCTTCATAAGCCCGTGCGACGTGAGGCTGCACATCAAATACGTTCACAACAAGGTGCCCTGGCCCAAACGTGATCGGACGAAAAAGATACAAGACGCTAATTTAGCACCTTATTAA
Protein Sequence: MITSNKQLQSNFCFECAALLRKFEKFRRKCYIAQEVLSKLKQSNSELTLANIRNLDRKQHKLASTITLNTLDCITIEGSQINNANFKEETFTTCKDKLNFNNHTIESDTQEIKHETKVEKESFHDHNDEINSITEKYDYKNKKRKTPNGITENGSKNRKASKTNSFESASDDEPLANKITKINENSEVNRVSKTSHKKFSLKYFEEYATVVFLSPEEAKKELLLRKESNNYLNSPFKCKFCYRGFEAEATYENHMKKHSNENGEYECDICRLRFPEQRCLCKHRLASHKRKFSCKLCSYVCFCTYQAKTHVSLHKGKKYPCEDCGEIFSMPNSLFMHKRVKHVTECVCDLCGKTFATPRGLYSHHMKTHRLDKNEKRGPKCEECEIQFATEEAWKLHLVLSSKHKVSNGCKYCGEAFPTSEGLKSHTRVHSRKRGRQDLKLPASCTICGKYLATVPEYKSHMRAAHPGSGAARALQADRRAPFVCETCGLAFKKQCFLKYHQRKHTGERPYACAQCDKTFQLAGALASHRAVHARRAHACQVCGRVFTFKSALNKHMKVHLNIRPHRCDICDKSFISPCDVRLHIKYVHNKVPWPKRDRTKKIQDANLAPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -