Basic Information

Insect: Erannis defoliaria
Gene Symbol: -
Assembly: GCA_905404285.1
Location: FR990084.1:10973834-10992191[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.028 2.5 9.4 0.4 6 22 12 28 6 28 0.86

2 14 0.37 33 5.9 0.0 3 20 35 52 33 54 0.93

3 14 0.84 74 4.7 0.7 1 12 200 211 200 214 0.91

4 14 9.7 8.6e+02 1.4 0.3 1 16 356 371 356 373 0.77

5 14 2.9e-05 0.0026 18.8 3.8 1 23 381 403 381 403 0.98

6 14 0.11 9.7 7.5 3.0 1 23 418 440 418 440 0.98

7 14 1.4 1.2e+02 4.0 0.1 1 9 461 469 461 482 0.90

8 14 1.9e-05 0.0017 19.3 0.6 2 23 489 510 488 510 0.96

9 14 0.0086 0.75 11.0 1.6 1 23 526 548 526 548 0.96

10 14 6.9e-07 6.1e-05 23.9 4.0 1 23 554 576 554 576 0.98

11 14 9.4e-05 0.0083 17.2 2.4 1 23 582 604 582 604 0.97

12 14 1.8e-06 0.00015 22.6 0.4 1 23 610 632 610 632 0.98

13 14 0.00059 0.052 14.7 0.3 1 23 636 658 636 658 0.98

14 14 2.6e-05 0.0023 18.9 0.1 1 23 666 689 666 689 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.028	2.5	9.4	0.4	6	22	12	28	6	28	0.86
2	14	0.37	33	5.9	0.0	3	20	35	52	33	54	0.93
3	14	0.84	74	4.7	0.7	1	12	200	211	200	214	0.91
4	14	9.7	8.6e+02	1.4	0.3	1	16	356	371	356	373	0.77
5	14	2.9e-05	0.0026	18.8	3.8	1	23	381	403	381	403	0.98
6	14	0.11	9.7	7.5	3.0	1	23	418	440	418	440	0.98
7	14	1.4	1.2e+02	4.0	0.1	1	9	461	469	461	482	0.90
8	14	1.9e-05	0.0017	19.3	0.6	2	23	489	510	488	510	0.96
9	14	0.0086	0.75	11.0	1.6	1	23	526	548	526	548	0.96
10	14	6.9e-07	6.1e-05	23.9	4.0	1	23	554	576	554	576	0.98
11	14	9.4e-05	0.0083	17.2	2.4	1	23	582	604	582	604	0.97
12	14	1.8e-06	0.00015	22.6	0.4	1	23	610	632	610	632	0.98
13	14	0.00059	0.052	14.7	0.3	1	23	636	658	636	658	0.98
14	14	2.6e-05	0.0023	18.9	0.1	1	23	666	689	666	689	0.97

Sequence Information

Coding Sequence: ATGGGAGACCTAACATTGATTTGCCCTCTATGCTGCAATAAGACTTTTAACTCCAAAGAAGCGCTTCTTGAACATTTATCTACTATTCTTCCAAATTTGTTTTGCCCTGTTTGCAACGCCAAAGTATCATCTATAGAACAGCTCTCTCAACATCTTACTCTCGACAACTGTGTGCCGAATGATCCTGATCCTGTACAAAATGTGTTATTTGAAAGCACAGAGAATAATGAATATGAATCAGAAAATTCCGCTACAATGGAATATAAGCGCCTTGACGATGGTAACACAAACACTGAACTTAACTCAGAAAATGATGTATCAGAGCTGGAGCTGGTGGATTCAAGCGACATCAATAAAATGCAGATTGATTTGATGAAATGCTTACAAACCCAAGAGTTGAAGCTTGTAAAAGAAGAAGGAGCAAATCGATATATAATTATATCAGGAGAAGATTCTGGCTTGAAATCTGAAGATATTGTTACAAAACAGAATAAAGATGGCACTGTGTCCTTTACCTCCGTAAAAGATATCAAAAATGAAGAAATGGATATTATTTTACATGCAGATAAGGAAGATAACGACACCGTAGTACAAGAGTACAGTTGTAGTACTTGCCAAATGTCATTCACATCTGTGTTTGACCATATTGCCAGCTACCATACGGATCAGCATGTGGTAATACAGGGCAATGTAGGAAATTCAATGTATACTTTTCAAGATGGAGAATATGAAATGGTGGAAAGCGAAGAGCCTACAAAAGAGAGCCAAGGTTCTAGAAGAGTGATCACCGACACTGGCGCTATTGTTGAGACTCCTATTGTTGACAAAGCTGGATCTCCAGAAAAAGACTTCGCGATACAACGAGATACGACAAAACCTCTCGAAGTAAAGCCAACGAAACAGCAACCAAATGAGAAGTCAGGTCGAAAACGTTACGTCCATGTCGAAAACTTATGCGAAGGTGTCATCAGAGATTTAAAACCTTCTGAAAAAAAGAGTGCACAATGCCACAAGCTGGTGGTGGCTCCACCTGTGGTAACTTTGGAAGGCGAGAGTGTACAGATGTACCAGTGTACTTTATGTAAAATGTACGGCAGCCAACTCGACGAGTTTAGGTCGCAGCTCTGTAAAGCAGCTAAATACTCGTGTACACACTGCGACGTATCTTACGATAATTCTAAATCGTTGTGTGCTCATATGAAGGTGCATAAACTAAAACCAGAAAGCTCCATACAAGATGTACCAGAGGTATACGAGTGTGAAATATGCTGTACGGTGTTCCTCACAAATAAATCGTTAAAATTGCATAAAAGAATGCATGAACCTGTCAAATCTAGACCCATAGTCGCTCCAAAAAACTGTACGAACGGCGATGACCGATACCAATGCGGCGTGTGCGGTAAAATGATTCCTCTTGATTACCGCGCCATACATAAAGAAAGCCACGAGTGCGACAAGATGCTAAACTGCTCTATCTGCAATAAGAAGTTTAGTTCATTGGAGTTTTTAGAGATGCATATGAATGTACATAGCATAGAAAAGCCACAACCGGGGAAATCGGATAAATCTTTACCGTACAGTTGTATATATTGTGATAGGAAATTCGCCAGGCCACATGAAAAAGTTAAACATGAACGGATACACACAGGAGAGAAACCTCACGAGTGTGAGATTTGCGGCAAATCGTTCCGTGTATCTTACTGTCTCACTCTTCACATGCGCACACACACAGGCGCGCGGCCCTACGCCTGCCCAATTTGTGGCAAAAGGTTCAAAGCCCACAGCGTATACAACCACCACCTACTGACCCACTCCGAAGTGCGAGCGTACAAATGCCCGTACTGTCCAAAAGCGTTCAAGACGTCCGTGCAGTTGGCTGGACATAAAAACTCACATACCAAACCCTTCTCCTGCACACAATGTAACAGGCCGTTCGCATCGCTGTACGCGGTCCGAATCCACACGGAAACGCACAACCGTCAAAATAACCTGAAGTTCCGGTGTCCGATGTGCGGCGCGAGCTACGCGCGGGCGTTCGCGCTTAAAGACCACATCAAACAAGTGCACAAACAGGAGGTCGACCCGCAGACGGTGGAGCTGGACATCTGGCCTGGCAAGGACGGCATTGAAGATACTGACAAGGATCTAACGGAAGAGATAACTGACTTGAAAATCCCAGCGGATGAACTAATAGTTCCTAATTAG
Protein Sequence: MGDLTLICPLCCNKTFNSKEALLEHLSTILPNLFCPVCNAKVSSIEQLSQHLTLDNCVPNDPDPVQNVLFESTENNEYESENSATMEYKRLDDGNTNTELNSENDVSELELVDSSDINKMQIDLMKCLQTQELKLVKEEGANRYIIISGEDSGLKSEDIVTKQNKDGTVSFTSVKDIKNEEMDIILHADKEDNDTVVQEYSCSTCQMSFTSVFDHIASYHTDQHVVIQGNVGNSMYTFQDGEYEMVESEEPTKESQGSRRVITDTGAIVETPIVDKAGSPEKDFAIQRDTTKPLEVKPTKQQPNEKSGRKRYVHVENLCEGVIRDLKPSEKKSAQCHKLVVAPPVVTLEGESVQMYQCTLCKMYGSQLDEFRSQLCKAAKYSCTHCDVSYDNSKSLCAHMKVHKLKPESSIQDVPEVYECEICCTVFLTNKSLKLHKRMHEPVKSRPIVAPKNCTNGDDRYQCGVCGKMIPLDYRAIHKESHECDKMLNCSICNKKFSSLEFLEMHMNVHSIEKPQPGKSDKSLPYSCIYCDRKFARPHEKVKHERIHTGEKPHECEICGKSFRVSYCLTLHMRTHTGARPYACPICGKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCTQCNRPFASLYAVRIHTETHNRQNNLKFRCPMCGASYARAFALKDHIKQVHKQEVDPQTVELDIWPGKDGIEDTDKDLTEEITDLKIPADELIVPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00033153;
90% Identity: -
80% Identity: -