Basic Information

Insect: Erannis defoliaria
Gene Symbol: -
Assembly: GCA_905404285.1
Location: FR990073.1:13986232-14001230[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.056 4.9 8.4 4.6 2 23 224 246 223 246 0.95

2 12 0.032 2.8 9.2 0.6 1 23 255 277 255 277 0.96

3 12 4.3e-05 0.0038 18.2 1.7 2 23 284 305 283 305 0.97

4 12 0.00047 0.041 15.0 0.1 1 23 311 333 311 333 0.98

5 12 0.00088 0.078 14.1 3.2 1 23 342 364 342 364 0.97

6 12 3.6e-05 0.0031 18.5 0.3 2 23 371 392 370 392 0.96

7 12 0.00053 0.047 14.8 5.1 1 23 398 420 398 420 0.99

8 12 1.9e-07 1.7e-05 25.6 1.8 1 23 426 448 426 448 0.99

9 12 1.1e-06 0.0001 23.2 0.5 1 23 454 476 454 476 0.98

10 12 0.00051 0.045 14.9 3.1 1 23 482 503 482 503 0.97

11 12 0.0011 0.099 13.8 1.5 1 23 509 533 509 533 0.96

12 12 0.00032 0.028 15.5 2.0 1 23 539 561 539 561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.056	4.9	8.4	4.6	2	23	224	246	223	246	0.95
2	12	0.032	2.8	9.2	0.6	1	23	255	277	255	277	0.96
3	12	4.3e-05	0.0038	18.2	1.7	2	23	284	305	283	305	0.97
4	12	0.00047	0.041	15.0	0.1	1	23	311	333	311	333	0.98
5	12	0.00088	0.078	14.1	3.2	1	23	342	364	342	364	0.97
6	12	3.6e-05	0.0031	18.5	0.3	2	23	371	392	370	392	0.96
7	12	0.00053	0.047	14.8	5.1	1	23	398	420	398	420	0.99
8	12	1.9e-07	1.7e-05	25.6	1.8	1	23	426	448	426	448	0.99
9	12	1.1e-06	0.0001	23.2	0.5	1	23	454	476	454	476	0.98
10	12	0.00051	0.045	14.9	3.1	1	23	482	503	482	503	0.97
11	12	0.0011	0.099	13.8	1.5	1	23	509	533	509	533	0.96
12	12	0.00032	0.028	15.5	2.0	1	23	539	561	539	561	0.98

Sequence Information

Coding Sequence: ATGGAAATGCCTAACCTAGGTGCTGCGGAAAACAGCAAAGAAAACATAATTGAAATTGAAATACCCTATCCCTTATACCAGTATTTGAGTTCAGAAGAATGCAATTTACAGAATATTTGTAGAATATGTCTCTCAGTTAATGACTCTGTGCTCTGCCCGTTATTCTCAGCTAAAGACCAAAGTGTTCTAGCGAATATGTTTATGACTATATCTGAAGTACAGACAAGTCCAGAAGACGGGCTGCCTTCTAATATATGCCAGACATGTCAAACTGAAGTGATGAACTATTACGAGTTTAAAATGAAATGTGTCAAATCTGACTACACACTAAAATCTGTATTGAAAGGAGAATTTGTAGCTAATGAAAACTCTAATGCAAATGATCATGCTACTCAGATTAAAACTGAGCCAGAGACAAGTGACATCAAAATAGAGGATATCAATGATGTACCTGTGAGTGATGTACCAGTAAAAGAAGAAGATGCAGGTATTGATTATTTAGAAGATTTAAAAGAGACTGTTAGTGATGATGAACCACTTTGTAAAGTACAGGACTCAATTAATAATCAAAAGGAAATCACAATCATAGACAGCGACCCGAAGGCACTACTAGAGAAAACTAAGGAGATTAGTGACGAAAATGCCACTCACACAAAGAAAGTAAAAAATCAGTGCACATTTTGTTCCAAGAAATTTCACAAAGCGAAGCTACTACGTGAGCACGTCAGCAAACGTCATAAGACTGTGGTCTCCGAGTCGCCGTACCCATGTCAGCACTGCAAAGATGCCTTCGACTCCGAGTTCGATCTCAAGATACATGGCATGCTGCACAACCAGGGAGAGGACTGGAAATGTACGCAGTGTCAGAAAGAATTTAAAGGGCGGGCGGAGCTCCGTCGTCACACCCAGCGGCATATGTCGCGCCGGCGGTACGAGTGTGCCCGCTGCGGCGCCACGTTCGTGGAGATGTACGCACTGCTCCGGCATACGCGCGTCCACACCGGCCAGGCCGCCGAGAAGAAACACAAGTGCACCGAATGCGACAAGAGGTTCTCGTGTGCGGGCGGGCTGAGGACGCACATGTCAGCACACGGCGCGGCGCGCGCCTGCGTCTGCAGCGTGTGTGGCGCCGCCTTCGCCTCGAAACGGCTGCTCGCCTCGCACCAGCGCATCCATTCCGACGACAAGCCGTACGAGTGCACCTTCTGCGAGAAACGGTTCCGTCACGAGTCGACGCGTAACACGCATGTGCGCACGCACACAGGCGAGCGGCCGTATGTGTGCGCGCAGTGCGGGAAGTCGTTCATACAGCACTCCAACATGACACTGCATATGCGGACGCATACCGGTGAGAGACCGTATGCGTGTACAATGTGCGAGCGCACGTTCTCTTCGGGCTCAACACTCAAAGCGCACATACGGACCCACACCGGCGAGCGGCCCTACGCTTGCAAAATTTGTGGAAAGAGGTTCGCGCGCATGTGTCTGAAGAACCACATGCAGACGCACAGCGGCGAGCGGCCACACACTTGCCCCGCGCCATCTTGTCTCAAGCGCTTCACTACTGCTAAAAGTCTGAAGGACCATTTTCGGGTCCACACAGGGGAAAAACCGTATGAATGCGCAAATTGTACCGAAAAGTTTATGACGAAATCTCAGTTCATGAAGCATGTGAAGAATCACGAGAAAGAAAAGAAAGCGGGTAAGAAAGGCTTAATGTTGACGCCGGTCACAGTTTCCGACAAAAACATTCGCCCGGCCACAAATCCACAGCCAGAAGAATCGGACCAATTCATGTATGTTGGTATAAATGAACCAGTACCGGACGAAAATCGAGCGAACTTGTCTACAGTAGATGAAAATCCAATTAAACCCGAAAATAGTCTAATATTTGAAGATGATACCGATGTTCAAACAAATCTCATTGTTCTGGATAGTGACCCGAGTTCAGTAACTAACTGTGTAAGTTACGTGAACGATGTGAACTTAATGACTGTAAATGAAGGAGAAGTTAGCATTTCGGCGGCCAGTGCTACTGTGGACGGGACAACAGTCAAACTGTATCAGTACGACCAAAGTTTATTGCAAATTCACACCGGCGGTGGTCAATTAACTATTAGTAGAATTAGTAGCAAAATGACAGCAAATTTTTAG
Protein Sequence: MEMPNLGAAENSKENIIEIEIPYPLYQYLSSEECNLQNICRICLSVNDSVLCPLFSAKDQSVLANMFMTISEVQTSPEDGLPSNICQTCQTEVMNYYEFKMKCVKSDYTLKSVLKGEFVANENSNANDHATQIKTEPETSDIKIEDINDVPVSDVPVKEEDAGIDYLEDLKETVSDDEPLCKVQDSINNQKEITIIDSDPKALLEKTKEISDENATHTKKVKNQCTFCSKKFHKAKLLREHVSKRHKTVVSESPYPCQHCKDAFDSEFDLKIHGMLHNQGEDWKCTQCQKEFKGRAELRRHTQRHMSRRRYECARCGATFVEMYALLRHTRVHTGQAAEKKHKCTECDKRFSCAGGLRTHMSAHGAARACVCSVCGAAFASKRLLASHQRIHSDDKPYECTFCEKRFRHESTRNTHVRTHTGERPYVCAQCGKSFIQHSNMTLHMRTHTGERPYACTMCERTFSSGSTLKAHIRTHTGERPYACKICGKRFARMCLKNHMQTHSGERPHTCPAPSCLKRFTTAKSLKDHFRVHTGEKPYECANCTEKFMTKSQFMKHVKNHEKEKKAGKKGLMLTPVTVSDKNIRPATNPQPEESDQFMYVGINEPVPDENRANLSTVDENPIKPENSLIFEDDTDVQTNLIVLDSDPSSVTNCVSYVNDVNLMTVNEGEVSISAASATVDGTTVKLYQYDQSLLQIHTGGGQLTISRISSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -