Ebal009838.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000003.1:4685419-4694256[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.059 7 8.1 3.3 3 21 91 109 89 110 0.94 2 12 0.00021 0.026 15.8 0.5 3 23 117 138 116 138 0.96 3 12 2.9e-06 0.00035 21.7 0.9 1 23 169 191 169 191 0.99 4 12 0.016 1.9 9.9 1.1 2 21 193 212 193 213 0.94 5 12 4.1 4.9e+02 2.3 0.0 7 22 608 623 608 623 0.90 6 12 0.031 3.7 9.0 0.1 2 23 852 874 851 874 0.96 7 12 0.097 12 7.4 1.3 3 23 903 924 901 924 0.91 8 12 0.00065 0.078 14.3 1.6 1 21 940 960 940 961 0.95 9 12 0.001 0.12 13.7 5.6 1 23 969 991 969 991 0.95 10 12 6.3e-06 0.00075 20.6 4.2 1 23 997 1019 997 1019 0.97 11 12 6.9e-06 0.00082 20.5 1.3 1 23 1025 1047 1025 1047 0.98 12 12 0.18 21 6.6 1.8 1 21 1053 1073 1053 1074 0.92
Sequence Information
- Coding Sequence
- ATGGAGGCGGTTGAAATAAAAACTGAACCGTTGGATGAATATTTCAATCAAATTCCTCAAGAAGAAGTCATAATTAAATCTGAAAATGAAATGGATTATAATTCCCCATTAGACATACATTGCAGGGAACCTGAAGTACAAATAAATGAAGGATTGCTGGATATAAAAGTTGAAATCACAAAAGAACTAGAAGAAACAACCACACCAAAGCGATCTCCAAAAGAAGATTGGCTCCGCGAAGAAACAAACTCTGACATTGATTGTAATCATTGTAAATTTTGTAATATGTTCTTCAAAAGTCGCACAACTCTCAAACTCCATGAAAGAAATTGTCCTCAAAAAAATGATTGTAGACTATGTGGTCAGAAATTTATAACATCTTATGCTCTTAATACGCATTTGAATAAAGTCCATAACCGGGATGCTGACTATGTTTCTCCACAAAAAGAGATAAAAAGATGCAAATTAGGTCGACCTCCTAATATCGACAGTGGTAATCAGAATTACACATGTGATATATGTAACTTAAAATTTGCAAATTCAAGAGACCTGAATAATCATATAAAAAAGCATAATACCTGCCAGCAATGTGGAGAAAATTTTAAATCATATAATGATGTTAAGCAGCATATTTGTGAAAATGCTGCCGTAAAAGAAGAAGGTGTGCAGAAAATTCGCATATTATTTAATTTGCAAAGTGATACTGAGACTCCAACAAAAAAAATATTTAAAGCAACAAAGAGCATGGGTAATTTTAGAGTTAACTTTAAAAAAGGAAAATATTATAATTATAACTTGACTTTTTCAGTTGTAATTCCAGGCGAGCAAGCTCATACTCCGGTCAAGTTGAGCGCCAAAGCTAAAAATGCTGACACCGAAAATGGAAATATTTCATCGCATAATTCAAGTCCTAAAAGTGGTTTTTCAGTCGTAACAAAAGATACTGATTTTGAAGCATTCGCCCAACAAATGATGAAGGGACTTACAGATATTCCTGAATCTTCGCCCAAAATTAAAAAATCTGAACCAATATCAGACCGTATTTTAAGAAAATTGCAAATTTCGACTGAAGGAGATAATAAAAGTTATGATTGTGAACAAAGTGAACTTACTACAAAAGCAGACTCAAATACAAATACAACTGATAATGTAATTGTGGATTCCGAGGGAAACGTTTATAAAATACTAAGAGAAAATTTTGTAAGTGAAACACCATTTATCAAAGAAGAACCCATCGATGATTTCTCCGGACCAGATGAAGAACCAGCCGAACCAAAAATGCCTTCCCCACTTCTTTACATAAAAGATGAGCCGCCAGATGAACAAGTTACTGCTGCAGATTCTACTGATTTACTATTAGAAGAACTATTTGATCGAAAGGTCAAATCAATTGCAAAAGTACGCCAAACTAAATTTCCACTTAATCCATCCTTCGAAACCAACGGTTTAGGTTTCAAAGTAAAAAAAGAAATCACCGCTCAAAAGCATTCTGATTTCGAAAGCAAAACACAAAAATTAAATTCCGATTCGCCAAAAGGCAAAAAACGTTCCTTTAAAAATAAATGTGCACGAAATGTAATCATAAAAAAGAAAAGCCTTGTTCACCTATCCCCGCATGTTTCCAGAAGGAAAGCACTTCCTCATAAAATTAAAGAAGAGATTTTGGAAAATATTACACCAGCTTCAGAAAATAGCAATCAAAATAAGGGTAGAAATCGGGTATCAAAACAACAATCACGTAAAAAATTATTCCCCCCAAAGGTGTCACCTAAAAAGGATTCACCTAAAAGAATTCTACCTACATTGAAAGATAAAAATTCCGGCGAAATTTTTGCATCTAAAAAAGAACTTTTACAACATCGACGCAAACAAACACTTTCAGCATTGAAAGTAGCTCAAAAAGAAATAAAAAAAGAATTGCTACCCATAAATGGCGATGGGGCTGAATTTTTAAAATTTTTAAACGCTAATGCAATTCTAGCCGATGTGAACTCTTCTGCATGTAAGATTAATGCTGCGGGCGATGGAACTTGCCTCTCTACCGATATAAAATGTTCAACAGTTGTAACTGCTTCAAATCAAGAAAATATAAACATAGGAGGCGATGTTTCTCTAAAACATGATGATGACAATGAAACCGCTGACGCAGAGTTAAAGATCTCAATAAAAGAAGAAATCGTCGACAATATTTCATCAAAACCTGACGATTCTAATCAGCCACCAATTACAATGCCTGACATTCCTTTAGATGGTGATTTTGATTTTGAAGAAATAATACAGTCAAATAAGCTTCCAAATTTCAACAACGTCAACCAAGTTATCCAAACTCTCACAGAAGAGTATAAGAAAGCAGAAAAAGTTATACTAAAAGAGCCAGCTCCTTTTCCAGTTAATGAAGCAAGTGAGGTTGTTGAGAGTCAGCCCTCAATACAATCTGCTGAAATTCTTGATGAACGAAATAGACCTGGTTCATTATTTTTTCCAATGCTGGATGATACTCAAATCTATAGTATGGTAGCTAACTCGTTAAATGAAAAATACCGTTACGTATGGATTTGCCCCCTGTGTCCAAGGCAGTATTATCAAGTGCGCCCATTCAAAAAACACCTTTTGACTATCCATTACCGAACTACAGAGGAACTTGAGGGAAAAACTTTTGAATTAAGACCTGAATTGGTTTTTGAATCTGCTCCTGATGAAACATTTTGTCACTTATGTCATGTTACACTCGCCGACAATGCCTCCCTAATAAAACATAAAATAGAACTGCACCAAGAAGAAGATCTCACTCAAACGCAGAAGAAAAAATCAATGCTACATAAATGTTATATTTGCAGTAAAGTGTGTTCGACGCGAGGCTTATTAGCTGAACATATGAAATCGGATTGTGGCAAGAATCCACAACACGCGTGTAATGTAtgcgacaagaaattccatacaaaaagtactttaactttacacaaaactatgcacactggagaattgccacattcgtgtggatattgtcagaaaagattccgtacaagaggccagctaacagtgcatacgcggacgcatactggagaaaaaccatttccctgtaaaGTTTGTGGTCAACGTTTTACTCATCGTGAAACTCTCATTGCGCATCTCTCTCGTCACATTGACATGAAACGCTACAAATGTTATGGCTGCGATCAATTCTTTTCCTGCATTTCTGGCCTTAAAACGCACAGAGCGACGCGTCCAGAGACCTGCGGACGCGTCGAACTCAATGCACGTGCAGTTGGACCGCGAGTTCGAGTTATCAAAGGTAATGTTATCTTCGAACCGCAACCCATATACAATGCAAGACTGGCAAAAACTCCGAGGCCCTTTCAGGAATCATATATCCTGGATCATAATTATCATCTTAAAGATCCTAGTCAGACAAAAAAAGTCTCCAAACAGACTGTAAAAAGTGAAGCTATTGTTGTGGCGCCCTAG
- Protein Sequence
- MEAVEIKTEPLDEYFNQIPQEEVIIKSENEMDYNSPLDIHCREPEVQINEGLLDIKVEITKELEETTTPKRSPKEDWLREETNSDIDCNHCKFCNMFFKSRTTLKLHERNCPQKNDCRLCGQKFITSYALNTHLNKVHNRDADYVSPQKEIKRCKLGRPPNIDSGNQNYTCDICNLKFANSRDLNNHIKKHNTCQQCGENFKSYNDVKQHICENAAVKEEGVQKIRILFNLQSDTETPTKKIFKATKSMGNFRVNFKKGKYYNYNLTFSVVIPGEQAHTPVKLSAKAKNADTENGNISSHNSSPKSGFSVVTKDTDFEAFAQQMMKGLTDIPESSPKIKKSEPISDRILRKLQISTEGDNKSYDCEQSELTTKADSNTNTTDNVIVDSEGNVYKILRENFVSETPFIKEEPIDDFSGPDEEPAEPKMPSPLLYIKDEPPDEQVTAADSTDLLLEELFDRKVKSIAKVRQTKFPLNPSFETNGLGFKVKKEITAQKHSDFESKTQKLNSDSPKGKKRSFKNKCARNVIIKKKSLVHLSPHVSRRKALPHKIKEEILENITPASENSNQNKGRNRVSKQQSRKKLFPPKVSPKKDSPKRILPTLKDKNSGEIFASKKELLQHRRKQTLSALKVAQKEIKKELLPINGDGAEFLKFLNANAILADVNSSACKINAAGDGTCLSTDIKCSTVVTASNQENINIGGDVSLKHDDDNETADAELKISIKEEIVDNISSKPDDSNQPPITMPDIPLDGDFDFEEIIQSNKLPNFNNVNQVIQTLTEEYKKAEKVILKEPAPFPVNEASEVVESQPSIQSAEILDERNRPGSLFFPMLDDTQIYSMVANSLNEKYRYVWICPLCPRQYYQVRPFKKHLLTIHYRTTEELEGKTFELRPELVFESAPDETFCHLCHVTLADNASLIKHKIELHQEEDLTQTQKKKSMLHKCYICSKVCSTRGLLAEHMKSDCGKNPQHACNVCDKKFHTKSTLTLHKTMHTGELPHSCGYCQKRFRTRGQLTVHTRTHTGEKPFPCKVCGQRFTHRETLIAHLSRHIDMKRYKCYGCDQFFSCISGLKTHRATRPETCGRVELNARAVGPRVRVIKGNVIFEPQPIYNARLAKTPRPFQESYILDHNYHLKDPSQTKKVSKQTVKSEAIVVAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -