Ebal031541.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Episyrphus balteatus
Gene Symbol
pita
Assembly
GCA_026256485.1
Location
JAGTYB010000022.1:3896594-3914082[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.0015 0.18 13.1 0.2 1 23 280 302 280 302 0.95
2 10 5.1e-05 0.0062 17.7 3.5 1 23 308 330 308 330 0.96
3 10 1.5e-05 0.0018 19.4 3.4 1 23 336 358 336 358 0.99
4 10 0.00036 0.043 15.1 0.5 1 23 364 386 364 386 0.97
5 10 5.7e-05 0.0069 17.6 0.2 1 23 392 414 392 414 0.95
6 10 2.5e-06 0.0003 21.9 0.7 1 23 420 442 420 442 0.96
7 10 0.00046 0.055 14.7 4.4 1 23 448 470 448 470 0.98
8 10 0.0019 0.22 12.8 0.3 1 23 477 499 477 499 0.95
9 10 0.78 94 4.6 0.0 2 23 505 526 504 526 0.96
10 10 0.1 12 7.4 0.3 1 23 532 555 532 555 0.94

Sequence Information

Coding Sequence
ATGGGTGACATAGTAGAGACTCGTCAGAGTGAATTGAGGGACAAAAAGATATGTCGCTTTTGCTTGACTCAAAATGCCTCCGATTTAACAAACATTTATTCCCGTTCCCGGGAAAATCGAGTGAAGACTGCACCATTGCCTCTTCAGGTGATGGCCTGTGTTTCCATTGAGGTTTTTTCAAACGATTGTATGCCTGGTTACGTATGCAGTGAATGTCGTTTAATTTTCGACTATTGTTATCGCTTTAAGCAAATGTGCAAGAAAGCCGATACATGCCTTCGTCACTATCCTCTTACTGGACAATGGTCGCCTGCAATGGACCATCCAAAAATTCCAACTGAACTTTTACAAAAAGAAAAATCTGCTCAAAAAAATCTGAACGCATTACAAGTTCCCAAACCCATAGAAGTTGTAGAAACTATAAAAGAAATTGTCGAAGAGGAAGAAGATCAATCGCCTGCTATAACCATAAAACCAGAGAACATCAAAACTCAAATTCCGAACAAAAAATCAACTCAAACTAGACAGCAATCCCAGAAGACAGATGTAGAAATAGATGAACCAGATGATGAAGAAGAATACACACCAAAAAAAGCACCAGTTTCAGTTTCAGCAAAATCTGCTGTCCGCAAAACTTCGGTTGTAAAAATATTGAATAAATCGGCCATTCGCATTCTTAATAAAGAGGCTCAACGAGTTATCGAGCCAATAATGACGAAACCGGTGTTACAACGTGATGACGATGGCAATCTTTCAATTGTCACTCAGATTCTTGAGCAAGATGTGCCTGATATAAAAGAATCTCTAGCACAAACCACAGTATTAGAGACGAACGTTTACCCTTGTCCGCATTGTGAACGTTCTTTTCCATTGCAACAATTACTTGATATTCATTTGGTGAATCATAATCGAGAAAGAAGCTTCTTCtgcgaattctgcgacaagagtttcttcagcaaatacgacttgcagaagcacaacttgacgcacactggtgagaagccttataaatgcgttgtatgcaacaaaggttttacGCGCTCTACTTTGTTACATCGTCACGAAAAAACACACACTGATATTCCCAAGTTTATTTGTGTGTTCTGTGAGAAATCTTTTATATCGCAAGAAGAAATGGAGAAGCACACTGAACGGCATCGTAAACACCGACCATTTGTGTGCAAGATTTGTAACAAAGCTTTTGCCTTCAAGCAAGGCCTTGAACGTCACGAAGTTGTTCACTGTCGTCAACAACCATTCCAATGTCAATATTGCGACCAAAGCTTCCCAACCCCAAGTAAATTATCTAGACATTTGACAGCCCATGCTGGAAAACGTCCTTATCCATGCAAGCTTTGCCCTAAATCCTATCTACTTAGTCATCATTTGACTAGACATATGCGTTCCCACAAAAATGGCTCTGGTTCATATAAGTGCATTGATTGTCAGAAACCATTCAATACGAGAGATGACTTGATTTATCACTCGGCTGTGCATGCCGCTCAAACAATGGTTTGTCCGCTGTGCAAGGATGCATTTGATGATATTGAAACTGTAACTGAACATGTTAGACAGCATGCCGAAGGTGAAGCCTATGCTTGCGAGTTCTGCGATTTTATTTACATGACAAATGAAAGATTAGAAGAACACACCAAAGCTTCGCATGCCGATGAGATGGTTGCCTACGATGAGGATACTAGAAGAAATGCTTTGGCTGAAAAAAATGCAAAAAATCAAGATACAAATTCAAACGAAACCTCAACTAAAGAAATGGACGAGGTAATTGAAGAGTTTCTGTATGAAGAATTTCCAGATGATACTTTGAAAAAAGAAGAAACTGAGGAAAATGTCATTGTCAAGGACGAAGCTGAATGGGAAAATCAACTTGATAATCATAACCAAGCATCAATCGACACTTCTTTAGTTTCCACAGAAAACGAAACTATAGATGAAGAAACATTAGAACTTATGAATATAATTGAAATGAGCGAACAAGACAGCGAACCTCCTGCAAAAATAAAGAAAATCTATGGAAAACCAGCTGAAGTAGCAAAAGTTGTTTCAGTGAAACAAACACAACCACTTCGTCGAAAAGTACCGATAAAGTCTGGTAATGCAATATCACCAGCCAGTTCTAGTTCATCGTCGCCAAAGGAAAATAAGAAGCCACAACAAGCAACTCCAGCAGCAAAAATAATTTCAGTACCAAAGGCTGTTGTTAAGCCGCCAGTTTCAACGACACCAAAAACTCGTCAGCCAACCATTCAAGCAGCTCTAAAAGCCATATCGAAATCAGTTTCGGTAAAAAAAATAGAAACACCAAACAAAACATTGGTAACTGGTTCGATACCAAAACCAGTCGAAACCGAAACACCAACAAGAAAAACATCTCCACGAGTAGCAGCAGTGAAGCAGGATCCATCGCAACAGAACAAGGTATCTAAGCCGTCGCCTAATACAAATCAACGAATGTTACGTCAACGTAGTGAAACAACTCCGGAAGTTAGAGTGCAACAAGTTAAAGCTAGCCCCGTCTCTAAGGAAATTAAAAAATCTCCACAAAAGCCAGCCGCATTAGTGGCTGTGAAGAAAATTGATGCATCTCAAGAGGACAAAAAGCTTGTTGAAATGGTTATTGATGATAAGAAAGTAAAAGTTAAAAAAATTACAATGTCTAAAGCGCAAGTAGCTGAGATGACACGTGATGGCCGTATTCAAATGAAAGGAGGAACTATGATTCTTAAAAAGAATTCAGCATGA
Protein Sequence
MGDIVETRQSELRDKKICRFCLTQNASDLTNIYSRSRENRVKTAPLPLQVMACVSIEVFSNDCMPGYVCSECRLIFDYCYRFKQMCKKADTCLRHYPLTGQWSPAMDHPKIPTELLQKEKSAQKNLNALQVPKPIEVVETIKEIVEEEEDQSPAITIKPENIKTQIPNKKSTQTRQQSQKTDVEIDEPDDEEEYTPKKAPVSVSAKSAVRKTSVVKILNKSAIRILNKEAQRVIEPIMTKPVLQRDDDGNLSIVTQILEQDVPDIKESLAQTTVLETNVYPCPHCERSFPLQQLLDIHLVNHNRERSFFCEFCDKSFFSKYDLQKHNLTHTGEKPYKCVVCNKGFTRSTLLHRHEKTHTDIPKFICVFCEKSFISQEEMEKHTERHRKHRPFVCKICNKAFAFKQGLERHEVVHCRQQPFQCQYCDQSFPTPSKLSRHLTAHAGKRPYPCKLCPKSYLLSHHLTRHMRSHKNGSGSYKCIDCQKPFNTRDDLIYHSAVHAAQTMVCPLCKDAFDDIETVTEHVRQHAEGEAYACEFCDFIYMTNERLEEHTKASHADEMVAYDEDTRRNALAEKNAKNQDTNSNETSTKEMDEVIEEFLYEEFPDDTLKKEETEENVIVKDEAEWENQLDNHNQASIDTSLVSTENETIDEETLELMNIIEMSEQDSEPPAKIKKIYGKPAEVAKVVSVKQTQPLRRKVPIKSGNAISPASSSSSSPKENKKPQQATPAAKIISVPKAVVKPPVSTTPKTRQPTIQAALKAISKSVSVKKIETPNKTLVTGSIPKPVETETPTRKTSPRVAAVKQDPSQQNKVSKPSPNTNQRMLRQRSETTPEVRVQQVKASPVSKEIKKSPQKPAALVAVKKIDASQEDKKLVEMVIDDKKVKVKKITMSKAQVAEMTRDGRIQMKGGTMILKKNSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00984471;
90% Identity
-
80% Identity
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