Basic Information

Insect: Episyrphus balteatus
Gene Symbol: Prdm14
Assembly: GCA_026256485.1
Location: JAGTYB010000012.1:4194081-4195799[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.3e-05 0.0015 19.7 1.2 2 23 181 203 180 203 0.95

2 12 0.00095 0.11 13.8 5.9 1 23 209 232 209 232 0.96

3 12 4.7e-06 0.00056 21.0 0.6 1 23 239 262 239 262 0.96

4 12 3.4e-07 4.1e-05 24.6 0.9 1 23 306 328 306 328 0.99

5 12 2.1e-05 0.0025 19.0 3.0 1 23 334 357 334 357 0.98

6 12 0.071 8.6 7.9 0.1 3 23 367 390 365 390 0.90

7 12 0.00013 0.016 16.4 0.7 1 23 401 423 401 423 0.95

8 12 0.033 4 8.9 9.0 1 23 430 452 430 452 0.98

9 12 0.00068 0.082 14.2 1.4 1 23 458 480 458 480 0.96

10 12 0.0002 0.025 15.9 0.6 1 23 486 509 486 509 0.97

11 12 0.0045 0.54 11.6 2.4 1 23 515 537 515 537 0.96

12 12 6e-05 0.0072 17.5 2.4 1 23 543 565 543 565 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.3e-05	0.0015	19.7	1.2	2	23	181	203	180	203	0.95
2	12	0.00095	0.11	13.8	5.9	1	23	209	232	209	232	0.96
3	12	4.7e-06	0.00056	21.0	0.6	1	23	239	262	239	262	0.96
4	12	3.4e-07	4.1e-05	24.6	0.9	1	23	306	328	306	328	0.99
5	12	2.1e-05	0.0025	19.0	3.0	1	23	334	357	334	357	0.98
6	12	0.071	8.6	7.9	0.1	3	23	367	390	365	390	0.90
7	12	0.00013	0.016	16.4	0.7	1	23	401	423	401	423	0.95
8	12	0.033	4	8.9	9.0	1	23	430	452	430	452	0.98
9	12	0.00068	0.082	14.2	1.4	1	23	458	480	458	480	0.96
10	12	0.0002	0.025	15.9	0.6	1	23	486	509	486	509	0.97
11	12	0.0045	0.54	11.6	2.4	1	23	515	537	515	537	0.96
12	12	6e-05	0.0072	17.5	2.4	1	23	543	565	543	565	0.97

Sequence Information

Coding Sequence: ATGGAACAATTGGAGCAATTTTACAACCTCGATAAATACTCCTCCTGCAGAGCTTGTCTTGGCAATCTAAGTAACATGGAAAACCATTACGATGTCTTTGCAATACCCGATCTTCAACAGAAGTTTACTCAATGCACATCATTACCTGTGGAACCAGGTGATGGCTTTCCAATACAATTATGTGAAACTTGTTCTACCAAAATTGAAGATTTCTACACTTTCAAAGAAATGTGTATATCATCTAGAAATCAATTTCAAGATTATATAAATTCCGATAGAAAACCATGTTCAACAGAGCTCTCAATTGTTCCAAACAATTTGTTGCTTTTAACTGATACTAAACAGGAGAATGAGGACGAAGATCCTATAAGTCTTGATCAGTTTTCAAGTCTTGTTAAAACAGAACTTTTGATAAATGACGAAGAAAAAGATTCTGAAGAAAGTCAGAATCTTCTTGAATGTAACCAGGGTACTTTCAATGACACGACAAGTTCCATTGAGAAGAAAAAGTCAAAAAATGTTTTCAGTAAAATGCATTTAGAATGTAAAACCTGCCAAAAATCCTTTAAGAAAACTGAAACTTTACAAAGACACATTATATCCGTACATAAGGGTCTCAATCCATTTCAATGCCATCTGTGTGATAGGTCCTATGCCCGACATCATCGACTCAAATTGCACATAAAAGAAATACACAATGGCATAAAAGAAACATTTCCCTGCACAGAGTGTGACAAAATAATGTCCACAAAAGATAATCTTCGTCAACACATGAGGGATACACATTGGCATATTCAATGTGAACAAAACCTTGTTGAGAATTCCATTAACGAAAGCATAGAACTTAAAGAAAATGAAGAAACCATTGATTCCGTTCGAGACGAAAAGACAAATAAACTTTCGACTAAAGCTAACTTTAAATGTGAAATATGCCAGAAATTATTCAAGTCGAATGAAACTTTAGAAAGGCATATCCGCGTACATAAAGGACTCCAACCGTTTACCTGTCATCTATGTGACAGGTCTTATAATCGACGAAGTCGACTCTTATTGCATATTAAAACAATACACGAAGGTATACCAAATGAAAAAATTCCCTGCACTGTACCTGGATGCGACAGACTATTGGCTAGCAAGCAAACACTTCGCCAGCACATCAAGGATATGCATTGTAATGTTGAGAGAAAGCCCAGGCAACCTCATATATGCGAAGAGTGTGGCAAGGTTCTGACAAGTATAACTACTCTCCAGAATCATATGTACCAGCACACTGGACAGGAACTACCTCATGAGTGTCCACAATGTCACAAACGTTTTTTAAAGAAATGTAAACTTAAAGAGCATATGATGCGACATGCTGGCATTAGAAATTACATTTGTCCGGTTTGCGGGGCAAAGAAAACAACAAAACACGAACTCAAAAGACACATAAATTTTCACAATAGAGAAAAGAAATTTCCATGTCAAATGTGCGATATGTCGTTTTATAATATTTGGAGTTATAATCGACATAAGCGGATCGTTCATGAGGGTGTTAAGAAATATAAATGTTCCTATTGTGAGCAGGCATTTGGAAAAGCAGAGACGAGgaaacatcacgaaatgactcacactggagagaaaccacatgagtgcgatgtgtgtcagaaaaagtttatacaatatactgctttgaagaagcataaaatggtacatTTAAAGCATTCGAACCAGAATTAA
Protein Sequence: MEQLEQFYNLDKYSSCRACLGNLSNMENHYDVFAIPDLQQKFTQCTSLPVEPGDGFPIQLCETCSTKIEDFYTFKEMCISSRNQFQDYINSDRKPCSTELSIVPNNLLLLTDTKQENEDEDPISLDQFSSLVKTELLINDEEKDSEESQNLLECNQGTFNDTTSSIEKKKSKNVFSKMHLECKTCQKSFKKTETLQRHIISVHKGLNPFQCHLCDRSYARHHRLKLHIKEIHNGIKETFPCTECDKIMSTKDNLRQHMRDTHWHIQCEQNLVENSINESIELKENEETIDSVRDEKTNKLSTKANFKCEICQKLFKSNETLERHIRVHKGLQPFTCHLCDRSYNRRSRLLLHIKTIHEGIPNEKIPCTVPGCDRLLASKQTLRQHIKDMHCNVERKPRQPHICEECGKVLTSITTLQNHMYQHTGQELPHECPQCHKRFLKKCKLKEHMMRHAGIRNYICPVCGAKKTTKHELKRHINFHNREKKFPCQMCDMSFYNIWSYNRHKRIVHEGVKKYKCSYCEQAFGKAETRKHHEMTHTGEKPHECDVCQKKFIQYTALKKHKMVHLKHSNQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -