Ebal029502.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000019.1:536184-552170[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2.3 2.8e+02 3.1 0.6 2 21 179 198 178 201 0.83 2 18 0.32 39 5.8 5.1 2 19 244 261 243 264 0.91 3 18 1 1.2e+02 4.3 2.6 2 23 275 296 274 296 0.87 4 18 0.06 7.1 8.1 0.1 3 23 305 326 304 326 0.94 5 18 0.00084 0.1 13.9 3.0 1 23 332 354 332 354 0.97 6 18 0.0045 0.54 11.6 3.0 1 23 360 383 360 383 0.95 7 18 6.3e-06 0.00075 20.6 3.7 1 23 389 412 389 412 0.97 8 18 0.0012 0.14 13.5 0.2 1 23 459 481 459 481 0.97 9 18 0.59 70 5.0 0.8 1 23 486 508 486 508 0.96 10 18 0.064 7.7 8.0 0.1 1 23 524 548 524 548 0.96 11 18 1.5e-05 0.0018 19.4 1.7 1 23 552 574 552 574 0.98 12 18 0.046 5.5 8.5 0.8 1 23 580 603 580 603 0.95 13 18 0.016 2 9.9 0.7 2 23 609 631 608 631 0.96 14 18 1.3e-06 0.00016 22.8 0.4 2 23 635 657 635 657 0.97 15 18 0.00014 0.017 16.4 0.9 1 23 663 686 663 686 0.94 16 18 0.00055 0.066 14.5 1.0 1 23 692 714 692 714 0.98 17 18 1.8e-06 0.00021 22.4 2.0 1 23 720 742 720 742 0.98 18 18 0.0023 0.28 12.5 0.0 1 23 748 773 748 773 0.96
Sequence Information
- Coding Sequence
- ATGAAATTCAATTGCTTGCGATGTAATAATTCATTGGAAAATGAATTCCAATTGATTTTCGATGAAACTGGCATCGAACTGCATTTGGACAAGCTTCTAGCTGATATCTTTGAAATCTCTGTTGTCAGAGATCCATCTCTAACTCAAGCTCTGTGTGATGGATGCGTTAACATGCTAATAGAGCTTTACGATGCTCAAAAATTCAAAGAAGAAAAATTAGATTTGCCAGAGGATAATGAGAACAATCAGGAAATAGAAGAGATTACCTCTGAAATTGATACCAAAGAGGAAGTGCTGGAGGATGATATGATTATTGAAGAAATAGAAGAACAAACTGAAAATGAAGAAGAATTCAAGGAAATTATTGAAGAGTCTAATTCCATGGACAACGAAGAGTTTCTTGGTTTTAAAGAAACTGAAGAAAAAGAAGATAAAGATGAACATAATTCTTCCCTAAATGAATTAAACCTGCAGCATTATCTGGAGGATGTTATTAAAAGTGATTTGGAACTCATATCCTTTGATCAGAATTCTGTTTGTAAACTTTGTGATGAAACGTTAAACAGCCACAAAGCTTTGCTTTTCCACATTTCAGATAGTCATAAAACCGAGTCTGAACAGTATCCATGCATTTTCTGCGAGGAGCTAAGTTATTTTGATTCCATCACAAGTCTGGCTGTGCATATTGTACTCAAACATTATGATTTGAATTCAATAACGATATATTGTACCTGTCCCGAGTGTAATACAAGATTTTCATCGTTCCTAGAATATAATAAGCATTCTTGTTACAAACAAAGTTATGGCAGTCGTTTAATACAAGAGTGTGATCAATGTTCGAAGAAATTTATTTCCAATAAGAGGTACCGTTTCCATTTACAATTTCATCTAAACAAGCAAAGGCCTAAAGCTTGTTTCATCTGTGATATTTTATTTTCTGATGAAAATGATTTCTTTGAACACATTATGTTTGCCCATCAGAAGGAAGATTCATTCGTATGTAAAAAATGCGATCGAGTATGCACAACAAAACAATTGTACGACAATCATATGGAACTTCACAATTCAGTTAAATCATTTCACTGTCAATACTGCCCAAAGTCATATTTTTACAACCAAATGCTAATTAATCATGTTCAACAACAACATTCTGATAAACAACAGCATCAATGTGAAATCTGCAATAAGACTCTTACCAACAGACATCTACTAAAACGACACATGCAGATAGTACATATGGAAGAAACCGAAGATGATGTGTTTGTATGTTCAGCATGTGGACTTATTGGAATTTCTGAAGAAGAAATAATGTTTCATTCAGAAGATGATAAATGCCTAGGAGCAGAAACAATCATTGAGTGTTTGAAAATTGCTTATGCCTGCGAGTTTTGTGAACTTGCTTTCAAAAGCATCGACACTTTAAAGCAACACAGAGAAATCCATCAAGATAATGTATTTAAATGCTGGATATGTGAGGGCACATATTTGGAATTTAAAAAGCTTAAGACTCACATTCTCACACATAACAAACTTGAATCCATACAACAATTATTTCCAATTAACAGGCATTATGTTTGCGATATTGATTCGTGTGACCAATCCTATCTGACATGGCCATCTTTAAGAGCTCATAAAAACCGGCACGCAACCAAATTTACTTGTGAAATTTGTTCTCAAGCATTTACCACCGAATCAAAGCTCCATGCTCATCTTAAATCGCACGACACAAATGAAGAGTACCCCTGTCAATTTTGTCCAAAATTATGCATTTCTCAAATGTCTCTTTCCGTTCACGTTGCCCGGAAGCACAATAATAATTACAAAACATGTCCAACTTGCAAGTCAACTTGCAGTTCTGAAGAGGCTCTCATAGAGCACATCGAAATGCAACATACCGAAGCGAAATGTGAAATTTGTGGTAAAGTAACGAAAAACAAACGCAATCTTCAAGTTCACATTCAAATGATACATAGCCAAGTTAAGAGGTTCTTTTGTTCCGTATGCAATAAGGGTTACTTTAATAATAGCGATCTAAAAAATCATGAAAGAGCACTCCACCAAGAACCAAATAAGTTCAAATGTGAATATTGCAATTTTAGTTCGAGCTATGAAGCCTCTTTTAATGCTCACATACTTAAGCATGAACAAAATAAACCTTTTAAATGTGATGAATGTGGAAGGGAATTCACTCGAAAGTCAACTTTCAAATTGCATGTGTTGAGGCATTCTGATAACAAACCATTTGTTTGCCCAGTTGAACTGTGTGGTAGAAGTTTTGTCATGCTGGGTGTTTTGAATTCACACATCAAAAATTCTCATCCAGATTGTGAAGAAGTTAAAGTTAAACAAACTTCTAAAATACGTTCAGTTAAAAAAAAGAAACAAAGCAAAAAAGCTCTAAATAGAGACATCGATTCGGCGAATTCTTCTGATTATGTGATAGCAGAAGTTTATTCTGAAAGCGAATATATTAAAGCGGAAGAGGTTGATGGTGATATTGTGATATTTGATGGATCAAATGCAGAAGAAGAAGTTGTATTGGAATGCTCTGAGGAAGCAGATATGTATATAGATTGA
- Protein Sequence
- MKFNCLRCNNSLENEFQLIFDETGIELHLDKLLADIFEISVVRDPSLTQALCDGCVNMLIELYDAQKFKEEKLDLPEDNENNQEIEEITSEIDTKEEVLEDDMIIEEIEEQTENEEEFKEIIEESNSMDNEEFLGFKETEEKEDKDEHNSSLNELNLQHYLEDVIKSDLELISFDQNSVCKLCDETLNSHKALLFHISDSHKTESEQYPCIFCEELSYFDSITSLAVHIVLKHYDLNSITIYCTCPECNTRFSSFLEYNKHSCYKQSYGSRLIQECDQCSKKFISNKRYRFHLQFHLNKQRPKACFICDILFSDENDFFEHIMFAHQKEDSFVCKKCDRVCTTKQLYDNHMELHNSVKSFHCQYCPKSYFYNQMLINHVQQQHSDKQQHQCEICNKTLTNRHLLKRHMQIVHMEETEDDVFVCSACGLIGISEEEIMFHSEDDKCLGAETIIECLKIAYACEFCELAFKSIDTLKQHREIHQDNVFKCWICEGTYLEFKKLKTHILTHNKLESIQQLFPINRHYVCDIDSCDQSYLTWPSLRAHKNRHATKFTCEICSQAFTTESKLHAHLKSHDTNEEYPCQFCPKLCISQMSLSVHVARKHNNNYKTCPTCKSTCSSEEALIEHIEMQHTEAKCEICGKVTKNKRNLQVHIQMIHSQVKRFFCSVCNKGYFNNSDLKNHERALHQEPNKFKCEYCNFSSSYEASFNAHILKHEQNKPFKCDECGREFTRKSTFKLHVLRHSDNKPFVCPVELCGRSFVMLGVLNSHIKNSHPDCEEVKVKQTSKIRSVKKKKQSKKALNRDIDSANSSDYVIAEVYSESEYIKAEEVDGDIVIFDGSNAEEEVVLECSEEADMYID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -