Basic Information

Gene Symbol
ZFX
Assembly
GCA_026256485.1
Location
JAGTYB010000151.1:183967-192973[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00028 0.033 15.4 0.2 1 23 202 224 202 224 0.98
2 16 0.46 55 5.3 1.0 1 23 268 291 268 291 0.87
3 16 0.024 2.8 9.4 3.0 1 23 423 445 423 446 0.96
4 16 2.2e-07 2.6e-05 25.2 2.9 1 23 452 474 452 474 0.96
5 16 0.00075 0.09 14.1 2.6 1 23 480 502 480 502 0.97
6 16 8.5e-07 0.0001 23.4 1.5 1 23 508 530 508 530 0.98
7 16 0.00016 0.019 16.2 4.3 1 23 536 558 536 558 0.98
8 16 3 3.6e+02 2.8 1.4 1 23 605 628 605 628 0.87
9 16 0.35 41 5.7 6.7 1 23 748 771 748 771 0.96
10 16 3.3e-06 0.00039 21.5 2.9 1 23 777 799 777 799 0.96
11 16 0.00059 0.071 14.4 3.0 1 23 805 827 805 827 0.97
12 16 6.1e-06 0.00073 20.7 0.6 1 23 833 855 833 855 0.98
13 16 1.5e-05 0.0019 19.4 1.0 1 23 861 883 861 883 0.98
14 16 0.0077 0.93 10.9 5.4 1 20 889 908 889 911 0.95
15 16 3.7e-05 0.0044 18.2 3.3 1 23 917 939 917 939 0.96
16 16 0.012 1.5 10.2 2.1 1 23 945 967 945 967 0.97

Sequence Information

Coding Sequence
ATGACTGAAGTACTATCACATACTTTTAAGCATGAAACAATAACCAGTATAAATAATCCAACAAAAGATCTCGAAACAAAATGTGGAGACATTCTCTTACTAGCCAATACAAATTTTGATGAACATATTCCAGAAGTTAAAGTTGAACCCTTACAAGATGCTCCAACAACAACTAACTTAGTTGTAGACAACGACGACGATGAGGATGATAAAAGTTCAATAGATTTAGATGCAGATATTGCTTCTCAAAATTCCGAAGATGAAAGTAACGAAGATGAAAAAAAGGATATTAAAGATGATCTTGAACCTGAAGTTAAAGTAGATATTGAAACAGAAGTTAAACCGAAAGATGATGAAAGTATTAAACAAATTGAAGAAGTTCTTACTAAAGAAATCAAGGTTCCACGAAGAAGAGGACGCAAAAAAGCACTCTACGAACCATTGATATCGATTTCGTCAAAAGACAAAAATGAGACTGAAAGTTCAGATAACAAGAACAATGAAGAAGCTCCAAATGAAACCTCAGAGACTAAAACTGAGGAAAACGATGATAGTTCACCAGACAAAAAAGGTAAGAAAAAATACTATCGCAAGAAAAATGTATTCCCCTGTCCGATTTGTAAAGAAAACATAACAGATGGTAGATCTCTTAAGAAACATATTCGATCGCACAATGAAGGAGGCAACGAAAACCGTTTCCAATGTGAGGAATGCGAAAATAACCTGATTGATGGCAAATATTCAAATTTTAAAGAAAGAAAATGTGGAGAAGTTATTTTACTGGCTAACATTGAATTTTGGTTTGTATGCACATTTTGCGATGAACGATTCCATAATGTTGTAATATTTCAAAACCACATTGAGAATGAACATATTAAAAATAATGAATCCAAATCAAAAAACAATGATCTATTAGATTTGCCGAAAAATGAAGAAACAGTTCAAGATGTTCACACTAGCAACAGTTGTGTCAATTCAACGGAAGAAACCGATACAAAATACTGCAATGATGTCGAGGATATTAAAAATTTCACTTCTGACCAGTCTGATGAAATCGAAGATGACATTGCAAAACTCAAAAATAAGGTGACACATAAAAGTACAAAAGAACTTACAGAAAGAGCAGAAGAAACTCATTCTGATAGTTGCCAACAAATGAATGAAAATGAGAACTCAGCAAATGAGACATTAGCTTTCAAAGACAGAAAAGATTTACTTCTTCCATCAAAGAAAGTTCCTAAAAAACGGAACCGCAAAAAGAAAGTTTACTCTTGTTCTTTTTGCCAGCACATAGCCCGTAATAAAAATTCATTAGAAGCACATTTGCTATCACACCATGGAACCGGAACTAGACATCAATGCGAAGAGTGTGGCAAATGTTTTAGGAACGCATCGAATCTTAAATCTCATTTAGTCATTCATTCCGGTACTCGTCCTTATAAATGTGATTTTTGCGATTCTGGTTTCTCACACCCAAACAGTCTTCGAACCCACCGTTACATACACACTGGCGAACGGCCTCACAAATGTAAGCTGTGTGATAAGGGATTTGTATCGAGTAGTGGGCTGAAAATTCATATGCGAGAACATACCGGCGAAACTCCTTATGTGTGTCAATATTGTGAGAGGGGATTTGCCAATAAATGCCATTACAATAGACACATTATTAGTCACTCAAGTCGAAAAGCTTTCGAGTGTAAGGAATCTTTTCCAAATGAAGAAATCAATGAGGCATGGGAGGATTCCGAACAATCAAATGGCACAGAACAAAAATGTGGAGAAATTATTTTACTATCAAATAGAAAGTTTTGGTTTCTGTGCACATTTTGCAATGAACGTTTTCATAGCGTTGTAATATTCCAAAACCACATTAAAGGCATACATATCAGAGACTTGGACTCATCACATTCAAATGTAAAGTTCGAATCTGTCGAATTGAATGAATATGAAGGATACCATGACCAAGTTAATGATAATTCATGGAAGCACAATGAAAATGAAAAACAAGACTCAAGTGATGGTGAAAAAGTAAAGAACCTGGATAATAAAATTGAGGAAATATTTCTAAACAACCAATCTGACGGTATTGGTGAAATGGTTCAAACAAATTCTGATTGTAAGAATGTTGACAATGTAACCAAAAATGAGGATGAACAACCATCAAGAGTTTCTAAGGACATTAAAGATCCACTACCCACCACAAAGAAGGTTCCAAAAAAACGGAATCGCAAAAAGAAGGTACATACGTGTCCCTTTTGTGAGCACATAGCCTGTGATAATAGATCATTACAAAGGCATATACATTCATCTCATAACACCGGAACTCGACATCAATGCGAAGAGTGTGGCAAGTGTTTCAGAAGCGGGTCTAATTTAAAATCTCATTTAGTTATACATGCCGGAACACGTCCATTTAAATGTGATATTTGCAACGTTGGTTTTAGCCATTACAACAGTCTTAAGACACATCGTTTTATACACACAGGCGAGCGTCCTCACAAATGTCTGGAGTGTGATAGAGGATTCGTTTCGAGTAGCGGACTTAAAGCACATTTGCGAGAACATAGAGGCGAAATACAATTCGTTTGCGAAATTTGTGAGAGAGGATTCTATACTAAAACTTTGTACAAAAGACATATGATAAGTCATTCAGGACGGCGAGCTCACAAGTGTACAGAATGTGATAAGGCTTTTCTTCATAGAGAAACTCTTACAAAACATATGGCGTGCCATTCGAGTGAAAAACAATTTGCTTGCAATATTTGTTCAAAAAAATTTAGTCACAAAAAGAACTTGGTTCAGCATGAAAAACTGCATCAAAATACTAAACAGTATATTTGCAAGGTGTGTAATAAAGATTTTGCACAGTATGCAGGCTTATATTGTCATATGAAGTATCATAAAGATAAAAAGTAG
Protein Sequence
MTEVLSHTFKHETITSINNPTKDLETKCGDILLLANTNFDEHIPEVKVEPLQDAPTTTNLVVDNDDDEDDKSSIDLDADIASQNSEDESNEDEKKDIKDDLEPEVKVDIETEVKPKDDESIKQIEEVLTKEIKVPRRRGRKKALYEPLISISSKDKNETESSDNKNNEEAPNETSETKTEENDDSSPDKKGKKKYYRKKNVFPCPICKENITDGRSLKKHIRSHNEGGNENRFQCEECENNLIDGKYSNFKERKCGEVILLANIEFWFVCTFCDERFHNVVIFQNHIENEHIKNNESKSKNNDLLDLPKNEETVQDVHTSNSCVNSTEETDTKYCNDVEDIKNFTSDQSDEIEDDIAKLKNKVTHKSTKELTERAEETHSDSCQQMNENENSANETLAFKDRKDLLLPSKKVPKKRNRKKKVYSCSFCQHIARNKNSLEAHLLSHHGTGTRHQCEECGKCFRNASNLKSHLVIHSGTRPYKCDFCDSGFSHPNSLRTHRYIHTGERPHKCKLCDKGFVSSSGLKIHMREHTGETPYVCQYCERGFANKCHYNRHIISHSSRKAFECKESFPNEEINEAWEDSEQSNGTEQKCGEIILLSNRKFWFLCTFCNERFHSVVIFQNHIKGIHIRDLDSSHSNVKFESVELNEYEGYHDQVNDNSWKHNENEKQDSSDGEKVKNLDNKIEEIFLNNQSDGIGEMVQTNSDCKNVDNVTKNEDEQPSRVSKDIKDPLPTTKKVPKKRNRKKKVHTCPFCEHIACDNRSLQRHIHSSHNTGTRHQCEECGKCFRSGSNLKSHLVIHAGTRPFKCDICNVGFSHYNSLKTHRFIHTGERPHKCLECDRGFVSSSGLKAHLREHRGEIQFVCEICERGFYTKTLYKRHMISHSGRRAHKCTECDKAFLHRETLTKHMACHSSEKQFACNICSKKFSHKKNLVQHEKLHQNTKQYICKVCNKDFAQYAGLYCHMKYHKDKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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