Ebal005532.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000065.1:1367403-1376190[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.002 0.24 12.8 0.3 1 23 115 138 115 138 0.95 2 14 0.00017 0.021 16.1 0.2 3 23 145 166 144 166 0.94 3 14 1e-05 0.0012 20.0 2.8 2 23 177 199 176 199 0.96 4 14 9.6e-05 0.012 16.9 0.5 2 23 246 268 245 268 0.96 5 14 0.00059 0.071 14.4 3.8 3 23 448 468 446 468 0.97 6 14 9.9e-06 0.0012 20.0 2.6 1 23 474 496 474 496 0.98 7 14 0.00026 0.031 15.5 2.8 1 23 502 524 502 525 0.96 8 14 2.1e-07 2.5e-05 25.3 1.2 2 23 538 559 538 559 0.97 9 14 0.00044 0.053 14.8 0.4 2 23 565 586 564 586 0.97 10 14 3.1e-06 0.00037 21.6 1.8 1 23 592 614 592 614 0.96 11 14 5.8e-05 0.007 17.6 3.2 1 21 620 640 620 642 0.94 12 14 8.7e-07 0.0001 23.3 0.8 1 23 648 670 648 670 0.96 13 14 2.4e-06 0.00028 22.0 3.0 1 23 676 698 676 698 0.99 14 14 7.4e-05 0.0089 17.2 0.2 1 23 703 726 703 726 0.90
Sequence Information
- Coding Sequence
- ATGGAATTTGATATTGAAAAAATGTGTAGAGTTTGTCTAAAAACCAATTTAGAATCTGTATTGTTGTTTGAAGAGCCAAAGAAAATCGGTGGGGTCAGTATCAGCGATATGATTTCTGAACTAACAATTTACAAGGTTCACCGGCATGATGAATTTCCACATCTTATTTGTTATGAATGCATTGAAAGAGTTGAAAATGCTTATGCATTTAAAAAGGATTTTGAGCAGTCCCATCGCAAGCTTGTTACATATTTGGATTCAATCAATAAATATCAGGCAGTTGGTGACATCAAACCCATACCCACGGAGGAAAAATCTACCCAAACCATAGATTCAACATTGTATCCATGTGAAAAGTGTGATCAAAAGTTTATTAAATATGAACGATTGAGGGAACACCGTGCAGTCGCACACAAGGGATCGGCTAATCTATGTCGAATATGCAACAAATCATTTAACCGCTTGGCAGGACTAAAAAGTCACATTAGTGCGGCACATCCAGAAATTGGTTATCACAACTCATCGAATCAATGTTATGTTTGTAATAAAATGTTTACACGTCGAGATCATGTTACACGTCACATTAGAAATGTTCATAAAATTCATACTTCTGGAATGGACTTGGGATTAGAAATAACAAAAACAGACAACAGCGAAGAATGTACAAATCCAATAGTGGAAGAGGGAGAATGTAACGCAGATGGTGTATTGAAATCAGAGATCAAACAGCTAATCGAATGTCTTGTGTGTTATAAAAACTTTTCAAGTCCAAACCGTCTTAATCGGCACATGATGAAAATTCATCAATTGGATTCCACCAACATCCTTAAGCAGGAACAAAATAGTGAAATGAACACATTTGAAAATGAAGTGGAACTACTAGCtgagcctgatgtttatagaaattattctaatgaagatgatgaagggcattatgataatgaggatattggtggtaatgatgtggatgacgatgatgatgatgatgatgaggacgaaagtgacgaggatgatgaagatgatgatgatgctgatgctgatgacaatgatggggatgataatgaagctaatgatagtaaaaatgatgatggtttaaattcaagtggagatgCGGTCGTTACCAACACTGAATTTGTAGCGGCAAACAGTTTTATTAAATGTGAAGCAGAAACCTTACAAGTTCCACCATCAACTGAAGAAATAAAAAAAGTTACAATAAAACAAGAAAAGCCAGACTTCAACATTACCGAAATTATTTATAAACCGCCCAAGCAAGAAAAGAATACAAAAAATGAATCGACATTTGATTGTTTCCATAGAATCGAAGATGGCAAATTCGGTTGTAATTTGTGTGAAAAGACTTTCAAATCTTCATATCACGTCAAAAGGCATTTCCTATCACACACACAAGAAAAAGCATTCCCATGCACAATGTGTGAGATGCGATTTAATAGAGCTGATCATCTTAAAAACCACATGACCAAACATAATCCAGTAAAGCCATTCCAGTGTGATAGTTGCGATGCGAGTTATGGTCGTGCAGATCACCTTAAACGTCACAAAGAAATGCACCATTCCAATGATCCAAATGCTACTCCCATCAAAGGTGAAGTCTGCGAAATTTGTAATAAGTCATACAGTTCAAAATCCTATCTACAAAAGCATATGCTAAAACACACAGAAAAATGTTGGAAATGTAAACTATGTTCAGTTGTTTTTGAAACAAATGAAGCCTTAAAGGAACATAGCAAAACGCACAGCAAAGATAAACCGTTTTTGTGTTCGGAATGTGGATTGTGTTTCCCGAGGAAAAATTATCTTATTATTCATATGAGAAGGCACAATGGTGAACGACCGTACAAATGTCAATATTGCGATAAGGGTTTTCCACGATCAACCGACTTAAAAGCACATGAAAAGTGTCACACCGGAGAAAAAACACATTTTTGCAATGTCTGCGGCAAAGGGTTCCCACGACCATACAAATTATCTGTACACATGCGGATTCATACTGGCGAAAAACCCTATCAATGTATGCATTGTCCAAAGGCTTTTGCTCAGTGCAATGATTTAAAGGCACACATTCGAAGGCACACTGGAGAGCGATTCCGATGCGAGTTATGTGGAGCTGGATTTATACAAAAATACAACTTAACACAGCACAAAGCTGATGCCCATGGCATTATAAAAGAATCTCGTTTAGGCAGAGTGGTTAAAGTAAATATATCAGAGCCACCTCATCAGGTTTTGCCTGAAGTTGTTATGAACGATCCTGATGAAAAATTGCAAATGGGTCAAGTAACTATGATGAATCCTGATCCGGTAGACAAATTACAAATGGGTCTTTCAACAATGATGAATAATCCTGAAGAAAAAATGCAAATGGCTCTTGCAACAAGCCTGGTCTTTCGTGGTGTGACGCTTCATTAA
- Protein Sequence
- MEFDIEKMCRVCLKTNLESVLLFEEPKKIGGVSISDMISELTIYKVHRHDEFPHLICYECIERVENAYAFKKDFEQSHRKLVTYLDSINKYQAVGDIKPIPTEEKSTQTIDSTLYPCEKCDQKFIKYERLREHRAVAHKGSANLCRICNKSFNRLAGLKSHISAAHPEIGYHNSSNQCYVCNKMFTRRDHVTRHIRNVHKIHTSGMDLGLEITKTDNSEECTNPIVEEGECNADGVLKSEIKQLIECLVCYKNFSSPNRLNRHMMKIHQLDSTNILKQEQNSEMNTFENEVELLAEPDVYRNYSNEDDEGHYDNEDIGGNDVDDDDDDDDEDESDEDDEDDDDADADDNDGDDNEANDSKNDDGLNSSGDAVVTNTEFVAANSFIKCEAETLQVPPSTEEIKKVTIKQEKPDFNITEIIYKPPKQEKNTKNESTFDCFHRIEDGKFGCNLCEKTFKSSYHVKRHFLSHTQEKAFPCTMCEMRFNRADHLKNHMTKHNPVKPFQCDSCDASYGRADHLKRHKEMHHSNDPNATPIKGEVCEICNKSYSSKSYLQKHMLKHTEKCWKCKLCSVVFETNEALKEHSKTHSKDKPFLCSECGLCFPRKNYLIIHMRRHNGERPYKCQYCDKGFPRSTDLKAHEKCHTGEKTHFCNVCGKGFPRPYKLSVHMRIHTGEKPYQCMHCPKAFAQCNDLKAHIRRHTGERFRCELCGAGFIQKYNLTQHKADAHGIIKESRLGRVVKVNISEPPHQVLPEVVMNDPDEKLQMGQVTMMNPDPVDKLQMGLSTMMNNPEEKMQMALATSLVFRGVTLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -