Ebal025038.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Episyrphus balteatus
Gene Symbol
-
Assembly
GCA_026256485.1
Location
JAGTYB010000071.1:755906-762095[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.00065 0.077 14.3 0.6 1 23 3 25 3 25 0.99
2 17 3.9e-06 0.00046 21.3 0.8 1 23 105 128 105 128 0.98
3 17 1.4e-05 0.0017 19.5 2.4 1 23 133 156 133 156 0.97
4 17 0.0011 0.14 13.5 1.9 1 23 162 184 162 184 0.99
5 17 5.9 7.1e+02 1.8 0.0 11 21 266 276 258 277 0.78
6 17 7.5e-05 0.0089 17.2 2.3 2 23 323 344 322 344 0.98
7 17 1.5e-05 0.0018 19.4 0.9 1 23 350 373 350 373 0.97
8 17 2.9e-07 3.5e-05 24.8 2.4 1 23 379 401 379 401 0.99
9 17 1.3 1.6e+02 3.9 0.9 2 23 529 550 528 550 0.89
10 17 1.9e-05 0.0022 19.1 0.8 2 23 596 617 595 617 0.97
11 17 1.5e-05 0.0018 19.4 4.5 1 23 623 646 623 646 0.96
12 17 1.8e-06 0.00022 22.3 1.1 1 23 652 674 652 674 0.98
13 17 2.3e-05 0.0028 18.8 3.4 1 23 723 745 723 745 0.98
14 17 6e-06 0.00071 20.7 0.2 1 23 751 774 751 774 0.95
15 17 7.8e-05 0.0093 17.2 2.1 1 23 780 803 780 803 0.97
16 17 1.8e-05 0.0021 19.2 1.4 2 23 841 862 841 862 0.98
17 17 1.3e-06 0.00016 22.7 0.3 1 23 868 890 868 890 0.97

Sequence Information

Coding Sequence
ATGCCATTCCAATGCAGCGTTTGTTTCCGTGGGTTTGCAAGTGGTTACAATATGAGAGCCCATGAAAAAACCCACTTCAATCAACATCGTAAAAAAGTTAAATCTAAATCTAAAAAAAGTGCCAAATTATCTCAAACCAATCAGCATAGTACAAACGAATCAAATAAAGAAACCGTCCAAAACACTCAAGACGCCATTGAAGATCAATTTGTTCAGGATTTTGAAAAACTAGAGCTACATCCACTCTTTGGGTCGATGTCTACAAGTCACGATGAAAATCCAAGTACCGCTACCGAACCAGTAGAAAATTACTTCCCGTGTCCCCACTGCGAAAAAACATTTGTTGTTCAATTGGATCTCAATGAGCATATGAAAACAACACACAGCGCAAGACCATTTTATTGCTCAATTTGTTATAAGACTTTCAGACAAGAACCTCACCTTAAAATTCACATTCAAATGAGTCATACAAAATCAAGGAATTTCAAGTGCAGTGAGTGTGATCGAGTATTTCTTACATTCTATATTCTCAATAAACACATGAGATCACACAAAGGAAAAAAGAGCCACATTATCAAAAGTAAATCTAAGCGTGGTCACAAAAAAAGAGGAAAAAATCTTAAACTCACTGACGATTCTGAGCCACTTAATACCAATATTGAACAAGTGGAAGTTAAAGAATTCTCCAATGTAGAAATTGCAAAAACTAGCCATACTTCAAATGAACAAAATCAACCAGAAGTAACTGCTGTGAAAAATAATGTTCAAATGACGTGTGCACTGTGTTCTGTTTTAGTGGATTCAGATAATCTAACCGATCACATGAAGGAGTGTCTTAACATATCACAAAGTATGAACATTCAAATGAAATCAGAACCTTTAGAATCTCCACAAGACTTAGGGCATCCGCTTTTTGAAACTTTTTCAAATCAGGAGGAAAACCGAACGGACACTGGTGTTGCGAAACAGTGTCCGGAATGCAATCAAGAGTTTTGTAGTTTTTCAAGCTTTGCTGAACATATGCAAACTCATAGGGTTGACAGACCTTTCGTTTGTGCAACGTGCAGCAAAGCTTTTAAGAAAAATGCACATCTAAGATCCCACATTATGATTGTTCATAAAAGAATACTACCATACAAGTGTACCGAATGTCCTCGGGTATTTTCCAGTAAATATAATCTAACCACGCATTCAAAAACTCACCTCGCAAAAAGCAATTTGAAAAAAGGAAGTTCTAAAAGACGTGCAATTGTAAAAAAGAGTTATTACAAAGACCCACCTTATCATGCTAAACCTTATCATCCCGAAAACACAAATCAGACCACATCAAATGAGAATGAGAAAAATGAAAGTCACGAAGATACAACAAATTATACTTTGAATGAAAGTCATGAGGATACATCAGAATATACTTTGAATGAAAATCACGAGGATACATCAAATTATACTTTAAATGAAAGTCACAAGGATACATCAGATTATACTTTGAATGAAACTCACGAGGAAACAACAAATTATGATTTTCAGAATCCATTAAATAAACCTGAAATACAATTATCAAGTGGTGCAAATGATAAGAAAATAAGATGCACATTGTGTTTTGTTTCAATTCATGCAGATGATTTATCAAAACACATGCAAGACTTTCATAATTTACCCGTATCACTAACGTTAGTGCCAATTAAGAAAGAAAATTTAGAGGAACCTGACCAATTGATGGATCGACCCTTGGAAACTGAGCCCAGTCAGACAGAAGCACCGAAGATTGACCTACCACGTCGCCTTCAATGTCCTACATGTGATAGAGAATTTGTACACCTTTCACGGCTTAATGAACACATGCGGGCCCATAGTGATGAAAGACCATTCATCTGCTTAGTTTGTGGAAAGACCTTTAAACGACACGGCCATCTTACGGCGCACATAGTGACGTGTCACAAAAAAGCTAAACCATTTAAATGCAAGGATTGCCCCCGAACGTTCTCAAGTAGCATAAACTTGGAATTGCATTCACAAACACACACAAGCCAACAACTTTATACCAGCTCTATTGTTGATACACACACACAAAGTGAAATTAACTTAGATCTACCCGCGTTTAATGAATCTCTTCCTCCATGTAATTTAGAATCTACACACATGGAAGAATGCACCGCTCAAGAAAACCATCAGTGTACTTTTTGTCCCACAGTATTTAAATCCATTTCACATCTCATGGAACACATGAAGGTCCACACCAGTGATCAACCTTTTATTTGTTCTCTTTGCGGCAAGGGTTTCAGTAGTAATGACGACCTCATCACTCATCGTTTAATACAGCACAATAAATCAAAACCTTATCAATGTGATCAATGCGAACGGGAATTTAGAACAAGCTTAGAACTGAAAAAACACCATCTCATGATTCATGGCAAGAACTTTAAACGCACGCAAAACCCAATGCGTCGTAAAATAAAACATCCAAAATTAAACCAGGCTCCAAATAACCAAGAGCCATTAAACTATGCCGAGGATATACCTCAATGTAATATTTGTAAAAAAAACTTTTCCAACAACTGGGTACTAAAGGAACACATGAAATCTCATACTTCTGAAAAGCCATTCGTCTGTCCAATTTGTGGACATGGTTTTGCTAAAAAATATAATCTCAAAATTCATATAATGGCACATAAAAAATTAAGCCGTTCAAGTGTCATTACTGTCCCCAATCGTACTGTACGAATTCTGGATTGA
Protein Sequence
MPFQCSVCFRGFASGYNMRAHEKTHFNQHRKKVKSKSKKSAKLSQTNQHSTNESNKETVQNTQDAIEDQFVQDFEKLELHPLFGSMSTSHDENPSTATEPVENYFPCPHCEKTFVVQLDLNEHMKTTHSARPFYCSICYKTFRQEPHLKIHIQMSHTKSRNFKCSECDRVFLTFYILNKHMRSHKGKKSHIIKSKSKRGHKKRGKNLKLTDDSEPLNTNIEQVEVKEFSNVEIAKTSHTSNEQNQPEVTAVKNNVQMTCALCSVLVDSDNLTDHMKECLNISQSMNIQMKSEPLESPQDLGHPLFETFSNQEENRTDTGVAKQCPECNQEFCSFSSFAEHMQTHRVDRPFVCATCSKAFKKNAHLRSHIMIVHKRILPYKCTECPRVFSSKYNLTTHSKTHLAKSNLKKGSSKRRAIVKKSYYKDPPYHAKPYHPENTNQTTSNENEKNESHEDTTNYTLNESHEDTSEYTLNENHEDTSNYTLNESHKDTSDYTLNETHEETTNYDFQNPLNKPEIQLSSGANDKKIRCTLCFVSIHADDLSKHMQDFHNLPVSLTLVPIKKENLEEPDQLMDRPLETEPSQTEAPKIDLPRRLQCPTCDREFVHLSRLNEHMRAHSDERPFICLVCGKTFKRHGHLTAHIVTCHKKAKPFKCKDCPRTFSSSINLELHSQTHTSQQLYTSSIVDTHTQSEINLDLPAFNESLPPCNLESTHMEECTAQENHQCTFCPTVFKSISHLMEHMKVHTSDQPFICSLCGKGFSSNDDLITHRLIQHNKSKPYQCDQCEREFRTSLELKKHHLMIHGKNFKRTQNPMRRKIKHPKLNQAPNNQEPLNYAEDIPQCNICKKNFSNNWVLKEHMKSHTSEKPFVCPICGHGFAKKYNLKIHIMAHKKLSRSSVITVPNRTVRILD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-