Ebal016427.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000082.1:1183949-1185745[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-08 0.00011 22.6 0.1 17 39 1 23 1 29 0.91 2 2 4.2 7.1e+03 -2.3 0.0 23 31 71 79 71 79 0.82
Sequence Information
- Coding Sequence
- ATGTCAATTAACTTTGCAGCAAAGATTTATAACGTTCCAGCCACAACTCTAAGGCGACATTTGAAAAATTCTTCTGCGAATAAGCAATTGGGTGCTTCCGCGTGTTTGGGAGCAGAAATTGAGACAAAAATATGCAATCATATAAAGAAGCTGCAGGCTCACGGATTCGCTCCAACGCGAGAATCAGTTTGCAAGATGGCATATAGTATTGCGGAACAATACAATATCCCGCATAGATTCTCAAAAGACCTGAAGAAAGCAGGTAGGGGTTGGTTGGAGCTCTTTTTAAACCGACATCCAGATTTGGCGATACGAAAGGCTGAAGGAGTTTCCCAAGCACGGGTTCTTGGTATGAATCGGCAGGAAGTGGCAACCTACTTTGACCTTCTTGAAAAAATTCTCATCGAAAACAACCTAATGGGCAAGGCTCGAAatatttttaatatggacgagaccgggtgccagctgaataataaaccagaactagttgtggccgaaaaggggtcaaaaaatgttgcagccataacatcagctggaaaaggggagacaattacagtgattgcatgctgtaatgcggagggaaatttcctaccaccagtttgtgtgtttaagggcaaaaacaaaaagccagaattcgaggatggtatgccaccaggctcagttgtatacatgggagagaagtcagcatacgtgacaagtgaatttttttttctttggctgaaagagcattttgtgcccagaaaaccaatgggtaaagtacttctcattttagatggacactcatctcactgcagcaacagtgaaatgttggagtatgctgctgtaaatgatattgtgctcttgtgtcttcctccgcactcaacacaattCCTTCAGCCGTTGGATCGAACTTTTTTTCGTTCTTTGAAGGCACACTACAACACAGCATCTACCGGGATTTGTCCGTTTAATCCTAGTGCTATTCCTGACTATGCATTTATTCCTGTAAATGAAGAAGTTAGCTTAATTGAACAGCCAATCATCCGTGAATCAACTCCAGAGCAGTCCTCAAGCCCACAACCACAACAAAATCCTCAACAGCAACAAAATATCCGGCAGGAACAGGCTAGCATTGAAGACCAAAGCGGTATAACTCCAAGCAAGGCGCTTGCTATTATATCACCAATTCCATCAACGTCAAGGTCAACACGATCCAATACAAGAAAGCAAAAAGCTCGAGTCCTTAACACAGAAGAGAACATCAAAACTCAAAAAATTAAGAAAAAAAAGATGCAAGAATTGAAAGAGAAAAAACAGAGAGCAAGGCAACGAAAAGATTCGACGTCATCTGAGGGTACGATATCATTGCATGAATTTTCTGATGGACCTGAAGACTTCGGCGAGAATACCTGCGTGGGCTGTGGTGAAGACTATCGTTCCACCCGAAAAAAAGAAGACTGGTTGCAGTGTATTATGTGCCATAGATGGGTACATGATTCCTGCACATCATTCAACCACATGTGCAATGAATGTGGTAATAAGAACATGAAATAA
- Protein Sequence
- MSINFAAKIYNVPATTLRRHLKNSSANKQLGASACLGAEIETKICNHIKKLQAHGFAPTRESVCKMAYSIAEQYNIPHRFSKDLKKAGRGWLELFLNRHPDLAIRKAEGVSQARVLGMNRQEVATYFDLLEKILIENNLMGKARNIFNMDETGCQLNNKPELVVAEKGSKNVAAITSAGKGETITVIACCNAEGNFLPPVCVFKGKNKKPEFEDGMPPGSVVYMGEKSAYVTSEFFFLWLKEHFVPRKPMGKVLLILDGHSSHCSNSEMLEYAAVNDIVLLCLPPHSTQFLQPLDRTFFRSLKAHYNTASTGICPFNPSAIPDYAFIPVNEEVSLIEQPIIRESTPEQSSSPQPQQNPQQQQNIRQEQASIEDQSGITPSKALAIISPIPSTSRSTRSNTRKQKARVLNTEENIKTQKIKKKKMQELKEKKQRARQRKDSTSSEGTISLHEFSDGPEDFGENTCVGCGEDYRSTRKKEDWLQCIMCHRWVHDSCTSFNHMCNECGNKNMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -