Ebal002292.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- Clic
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000157.1:787600-830080[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9e-12 6.6e-09 36.2 0.0 4 42 155 194 153 196 0.87 2 3 3.5 6e+03 -2.1 0.0 23 37 221 235 214 239 0.72 3 3 9.1 1.5e+04 -3.4 0.0 31 36 523 528 516 532 0.69
Sequence Information
- Coding Sequence
- ATGTCTGAAGATAACCAAGAAAATGGAGCTGCAAACGGCGATGTTCCAGAAATTGAATTAATTATTAAGGATGAAAGGAAAATCGAAGACTCTGATTCTGAAGAAGTAACGATGTCATCTGTACAATCTGATCAACCGATTCTGTTACCAATGGAAGTTTGCACAGAAAAAGATCAGTACATAATATTTGAATTAAAAAGTGATACTGATAGCACACCAACGTACTCTTACGTTATTACTAATTCAAAAGAAGAACCACCTCCTGATTGCCCAATAACAGCAGCAGAAAATGAAGATACAATTTCTGATCAAATTGTATCAAATAGTGTTACCGAAGTTATAGCAAATCCAGGGCCATACATAATTAGTGTAGAAATACCAGTTGAAGAATCACTCGAAACAGAAAATACCGATATTTGTAAAGAGAATTCGCCAAAAACAAAACGTGCTTTAGCCCGTAAAAGACTCGCTGAAGCTGTTGATGCTGTTGTCAATAATGACATGACCATTGGCAAAGCTGCCAAGGCTTTTGAAGTGACCAAAAGTACGCTATGGAAAGAGGTCAATAAACACACTAACCATCGCAGGAAAAAAGTTGACAAAGATCTCAACAAAAAGATCATTGATCGTATTTGTGCTGGTGAATCCCTCTCAGAGATTTCTAGATCTTTAAATGTTGCCAAGTCCACAATACACCTGCATAAAGTTCGTCTATCACAAAGTGGTCAACTCCCACCAAGTGTAACTTTCAAGCCACCAACAGATAAAATGGAACAACTTGCTATCAAAGATCGTATCATTCAGGCTTTTCGTGGCATTCGAGTTAACGCTTCACAAAAGAAATTAGCACAAAATGTTCAAAACACCTGCCAAGATACTGATATTAGCTCAGAAGAAACGAGTCAAGATGGAAGTAGTCAACAAGATGTAGATGATCCTCCAGAAAATGAAGATTCTGCAGAAGAAAGTGAAAATATATACGAAGAGCAACAATCTACAAGAGTGAAGGTGTCAATCAAGATGATTTTGATTTACTCGATGCTTATTGCATCTACAATCGATGGAAGACGTAAAGGAGCTTGCCTTTTTTGCCAGGAATATTTCATGGACTTGTACCTGTTAGCAGAACTTAAAACGATAAGCCTAAAGGTCACAACAGTTGATATGCAAAAACCCCCACCAGATTTTCGTACGAATTTCGAGGCAACACATCCGCCAATTCTTATTGACAATGGTTTGGCTATTTTGGAAAATGACAAAATCGAGAGGCATATCATGAAGAATATCCCTGGAGGATATAATCTCTTTGTGCAGGACAAAGAAGTAGCCACCCTGATTGAAAATATTTATTCCAAATTGAAATTGATGTTGGTCAAAAAAGACGAAAACAAAAACAACGCCTTATTGTCACATTTGAAGAAGATCAACGATCATTTGGGATCTCGGGCAACACGTTTTCTAACAGGCGATACTATGTGTTGTTTTGATTGCGAATTGATGCCAAGGTTACAGCACATTCGAGTGGCTGGAAAGTATTTTGTCGATTTTGAAATACCCACTCATCTGTCATCCTTGTGGCGTTACATGTATCACATGTATCAATTAGATGCCTTTACGCAATCCTGTCCAGCCGATCAGGATATTATCAATCATTATAAACTGCAACAGATGCTCAAAATGAAGAAACACGAGGAACTGGAGACACCAACATTCACAACGTCAATTCCGATTGATATTTCGGAATAA
- Protein Sequence
- MSEDNQENGAANGDVPEIELIIKDERKIEDSDSEEVTMSSVQSDQPILLPMEVCTEKDQYIIFELKSDTDSTPTYSYVITNSKEEPPPDCPITAAENEDTISDQIVSNSVTEVIANPGPYIISVEIPVEESLETENTDICKENSPKTKRALARKRLAEAVDAVVNNDMTIGKAAKAFEVTKSTLWKEVNKHTNHRRKKVDKDLNKKIIDRICAGESLSEISRSLNVAKSTIHLHKVRLSQSGQLPPSVTFKPPTDKMEQLAIKDRIIQAFRGIRVNASQKKLAQNVQNTCQDTDISSEETSQDGSSQQDVDDPPENEDSAEESENIYEEQQSTRVKVSIKMILIYSMLIASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENDKIERHIMKNIPGGYNLFVQDKEVATLIENIYSKLKLMLVKKDENKNNALLSHLKKINDHLGSRATRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLSSLWRYMYHMYQLDAFTQSCPADQDIINHYKLQQMLKMKKHEELETPTFTTSIPIDISE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -