Basic Information

Gene Symbol
-
Assembly
GCA_026256485.1
Location
JAGTYB010000112.1:904501-906441[+]

Transcription Factor Domain

TF Family
HPD
Domain
HPD domain
PFAM
PF05044
TF Group
Helix-turn-helix
Description
Prospero is a large drosophila transcription factor protein that is expressed in all neural lineages of drosophila embryos. It is needed for correct expression of several neural proteins and in determining the cell fates of neural stem cells. Homologues of prospero are found in a wide range of animals including humans with the highest level of similarity being found in the C-terminal 160 amino acids. This region was identified as containing an atypical homeobox domain followed by a prospero domain. However, the structure shows that these two regions form a single stable structural domain as defined here [1]. This homeo-prospero domain binds to DNA.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.0074 2.4e+02 2.3 0.0 95 116 3 24 1 32 0.90
2 18 0.0036 1.2e+02 3.4 0.1 90 116 46 72 30 76 0.88
3 18 0.0015 48 4.6 0.1 88 116 92 120 86 125 0.90
4 18 0.0014 47 4.6 0.1 89 116 117 144 115 150 0.90
5 18 0.0073 2.3e+02 2.4 0.1 90 115 142 167 137 174 0.86
6 18 0.0096 3.1e+02 2.0 0.1 94 116 170 192 154 195 0.85
7 18 0.00055 18 6.0 0.1 88 116 188 216 184 226 0.90
8 18 0.0016 50 4.5 0.1 90 116 238 264 224 269 0.89
9 18 0.0015 48 4.6 0.1 88 116 284 312 279 318 0.90
10 18 0.0032 1e+02 3.5 0.0 90 116 310 336 308 339 0.91
11 18 0.01 3.4e+02 1.9 0.0 88 116 332 360 326 370 0.90
12 18 0.037 1.2e+03 0.1 0.0 88 116 380 408 372 414 0.88
13 18 0.011 3.6e+02 1.7 0.0 88 116 428 456 425 462 0.89
14 18 0.011 3.6e+02 1.8 0.0 88 116 452 480 449 487 0.89
15 18 0.0016 51 4.5 0.1 90 116 502 528 488 532 0.89
16 18 0.0049 1.6e+02 2.9 0.1 90 116 526 552 522 557 0.89
17 18 0.0052 1.7e+02 2.8 0.1 88 116 572 600 565 603 0.90
18 18 0.0043 1.4e+02 3.1 0.1 90 116 598 624 593 630 0.88

Sequence Information

Coding Sequence
ATGAAGGCACACTTTTCAGTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCACTGAGGAATTTTTACTCCATGAAGGCACACTTTTCACTTTCTGAAGTTCTCATTCATTATGCAGACTATTTAATGAGGAATTTTTACTCCATGAAGGCACAGTTTACAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGAATTTTTACTCCATGAAGGCACTCTTTTCACTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTACAGTGCCTGATGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTTCAGTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGAATTTTTACTCCATGAAGGCACACTTTACAGTGCCTGATGTTCTCATTCATTATGCAGACTTTTCAATGAGGAATTTTAACTCCATGAAGGCACACTTTACAGTGCCTGATGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTTCAGTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCACTGAGGAATTTTTACTCCATGAAGGCACACTTTTCACTTTCTGAAGTTCTCATTCATTATGCAGACTATTTAATGAGGAATTTTTACTCCATGAAGGCACACTTTTCAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGAATTTTTACTCCATGAAGGCACTCTTGTCACTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTACAGTGCCTGATGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTACAGTGCCTGATGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACGCTTTACAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACTCTTTTCACTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACGCTTTACAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTTAATGAGGACTTTTTACTCCATGAAGGCACTCTTTTCACTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACGCTTTACAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACGCTTTACAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTTCACTTTCTGAAGTTCTCATTCATTATGCAGACTATTTAATGAGGAATTTTTACTCCATGAAGGCACACTTTTCAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGAATTTTTACTCCATGAAGGCACACTTTTCAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACTCTTTTCACTTCCTGAAGTTCTCATTCTTTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTTCACTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGAATTTTTACTCCATGAAGGCACACTTTTCAGTGCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTACTCCATGAAGGCACACTTTTCACTTCCTGAAGTTCTCATTCATTATGCAGACTTTTCAATGAGGACTTTTTAA
Protein Sequence
MKAHFSVPEVLIHYADFSLRNFYSMKAHFSLSEVLIHYADYLMRNFYSMKAQFTVPEVLIHYADFSMRNFYSMKALFSLPEVLIHYADFSMRTFYSMKAHFTVPDVLIHYADFSMRTFYSMKAHFSVPEVLIHYADFSMRNFYSMKAHFTVPDVLIHYADFSMRNFNSMKAHFTVPDVLIHYADFSMRTFYSMKAHFSVPEVLIHYADFSLRNFYSMKAHFSLSEVLIHYADYLMRNFYSMKAHFSVPEVLIHYADFSMRNFYSMKALLSLPEVLIHYADFSMRTFYSMKAHFTVPDVLIHYADFSMRTFYSMKAHFTVPDVLIHYADFSMRTFYSMKARFTVPEVLIHYADFSMRTFYSMKALFSLPEVLIHYADFSMRTFYSMKARFTVPEVLIHYADFLMRTFYSMKALFSLPEVLIHYADFSMRTFYSMKARFTVPEVLIHYADFSMRTFYSMKARFTVPEVLIHYADFSMRTFYSMKAHFSLSEVLIHYADYLMRNFYSMKAHFSVPEVLIHYADFSMRNFYSMKAHFSVPEVLIHYADFSMRTFYSMKALFSLPEVLILYADFSMRTFYSMKAHFSLPEVLIHYADFSMRNFYSMKAHFSVPEVLIHYADFSMRTFYSMKAHFSLPEVLIHYADFSMRTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-