Basic Information

Gene Symbol
ct
Assembly
GCA_026256485.1
Location
JAGTYB010000013.1:2960797-2982540[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-26 1.7e-22 80.0 0.0 3 71 508 577 506 583 0.94
2 3 4.3e-32 6.9e-28 97.3 0.0 3 77 936 1011 934 1013 0.96
3 3 5.7e-31 9.3e-27 93.7 0.0 3 77 1153 1228 1151 1230 0.96

Sequence Information

Coding Sequence
ATGCAATTGAAGTTCAAACAAAACAACATAGATATGCCAAGCATCCTGAACTGGCACAAGCTGCAGCTAGACTATATGATTAAAGCACTTATCGCTGAGGTTAACCGACTGCAAACCCTCCACGAATCACATATTGTACAGATACAAAGACTTGAAGATAATCTAGAAGTGAAACGTCAACACATTCTGAAACTTGAGACTCGTCTGCAGAAACAACCACAACTTTTCAAAAACGCTGAAGCTTCTGCTGTTGAACCCGTATCATGTCCAGAAGAGAAAGAATCTATTTCTATAGTTTCCTCTGAGCCACCAACAACAGTTGAAGAAATTCAAGTTAAAAAGGAAAACCAATTACCATCAACGACAAGCGACATCACAAGTCAGCCAGAGGCTTCTGTCAATGACCCCAAACATTTCCAAGAACTTATAATCGAAAGAACTAAGGCTCTCGCAGTCGCAGCTCATGCATCAAATGAAACACTAAAAGGCGAAGGAATTTCCAGTGATACAACCGTTGCAACAGCAGACCCAGAGACAATCAAGACTTGCGATAACGAACCTTCATCGTGCGAGGTCTCTAACAATAACCTAGATGCAAACGTTCAGCATCAGCAGGATTTGCAGTCTTCATGTGAGTCAGCGGCTGTATCAGAGCATATTCCTTCGTCAAACTTTCAAAGTGTCGATCAGTTTGGTTCGCTGCTTGGCGGTGAGTTAGTTAATTCATATTGGCGTCGTGGCTTCGAACATCTGCCATTGGCTCCACAAATTTCGATGCCTTTGCAACAGCCATCGCCAGCAACTACTATTGCTTCTGCTGCAGTCTCCATAGCAGCACACTCACCACCAACAATAACAACAACACATCCAACCTCTGAAACGCCAACATCGATTTTCCAAAATTTCCCATCAATTCTTTCATGCCGATCGCCTCCACCACTTCCATTATCGGTCACAGGACCATCAACCACAACTCTTTTGAGCCAACTAGTCAATTCAACCTTCTCATCGAATTCAACTCCTTCTCTTCGAACAGATTCCCATCCAACTTCTTCGACAACGACTACGGGATCCCACCTTCAACAACCTCCACTACACCACCACCAGCACCTCCACCACCAGCATCAGCATCCTTCCCTTCAGCATCATCAGCAACAACAACATCACCACCAGGACTTCGAGAAGGCAAACAGCCATCACGATTCCTCTTCAACAGCAAGCACGCCTAATCTTCAAGACCAGCGGTCTAATGATGGACACATTACTGGCTCCAAATCCGCCAAAAGTCAAGAAGATAACAACAACTCACTGGGCTCTCTGACCCATCTTCCACCTGCATTTCTGCCCGGTTTGCCATTCCAATTCCAAGATCGCGGTCATTTCCGCTTCGCCGAAGATATTCAACTTCCACCTGGAGCCTCTATGGCTGGCCGTCTAGGAGAATCCCTCATTCCCAAGGGCGATCCTATGGAAGCCAAGCTACAGGAAATGCTCCGTTATAACATGGACAAGTACGCCAATCAAAGTTTAGACACGCTCCACATATCACGACGCGTTCGAGAGCTACTTTCCGTGCACAACATCGGACAGAGACTTTTTGCGAAATATATTCTCGGTCTATCCCAAGGAACTGTATCCGAATTGCTTTCCAAGCCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTGCTTAAGTCTCTTATACCCAAAAAAGATTCAGGCATTCCCCAATATGGACGAAATGAAGATTCCATGTCGGATGATCGTATCGCACACATTTTAAATGAAGCCTCCAGCCTTATGAAGACTCCTCAGGGACCAGGTTCACAGTTGCAACAGCAAATGAAACATGAATCTCAGCGTCATTATCAACAACCGTCTTCATCAATTGACGATGAGCAGAGCAACGACGATTCGAAATCACCGCATGCATCTTGTACGTCACCATTctataaagaatcgccagtgcagcaacagcaacaacaacaacagcagcagcaaattcaacagcgccAAGAAGCCCAGCGTCGAAGTGCGAAGCCGGATGAAATGTCGCAGGACAAGATGGCAAGAATATACCAAGAAGAACTTCAAAAACTCATGACCCGCAATCCACGCGACGCATTTCCAAGTTTTTTGTTTCCTCACTTTTTAAGTGCTACAGGTGGTCTTCCACCCGCTAGCAGCACAATTCCACCCGACGATAACATTCGCATGGCTTTGGAAGCCTACCACCGTGAAATGGCCAAACTGCAACAGAACAACAGTGGCAGCATACCCAATTTTCCGAATTTCTCCAGTTTGATGGCACTGCAGCAACAAGTGTTGAATGGTGCACAGGATCTATCCGTCCCGAAGGAAAATGAAATCAAAGTCAATGGTCAACGACACTCGCTGGAAAGCTGCGACTCCTCGTCTAATCAAACCAAAGAAACAGCTGAAGAAGCCGCTCAACGTCACTCCAGTGCTTTTAGCTTAGTTCGACTTAAACCGGACGCTGCACCTGCACCTAATTCGATTCCAAACCCAAATACTAATTCAGCTGCTCCAAGTCCACTTAGCAATTCTATTCTTCCACCGGCTATGACAGCAAACGAGGACTTCTCAGCAGCTGCCAGTCCACTGCAAAGAATGGCGTCAATTACAAACTCATTGATTACACAGCCTCCAGTAACGCCTCACCACACGCAGCCACAAAGACCCACAAAAGCGGTTTTACCTCCAATCACCCAGCAGCAGTTCGACATGTTCAATAATTTGAATACCGAAGATATCGTTCGTCGAGTGAAAGAAGCTTTATCACAGTACTCCATAAGCCAGAGACTATTTGGGGAATCCGTTCTAGGGTTGTCACAAGGATCCGTTTCTGATCTCCTTGCCCGACCAAAGCCCTGGCATATGCTCACTCAAAAAGGTCGTGAACCATTTATCCGTATGAAAATGTTTTTGGAAGATGAAAATGCCGTACATAAGCTTGTAGCTAGCCAGTATAAAATAGCTCCCGAGAAATTAATGCGCACTGGTAGTTACAGCGGTAGTCCACAAATACCACAGGGTCTTGCAAACAAAATGAATAGCATTCCCATGCAAAAAATGATGAACGACTTGAAAATGGAACCACAAGCCCAACATATAATGCAACAAATGCAAGCAGCTTCCGCAATGGCTGCTGCAGCTGCTGCAGGACACCTGCAAAATGCTCAACATCAGGGTATGTTATTAACCACACCAGGACTTCCGCCGCAACATGCAATAAGTCTGCAGCAAGCTGCAGCCAATGCTGCTGCAAACGAAAAAAAGCCAATGATGATGCCAATCCACTCACCACATCAAGCAAATGCTATGCGAAGCAGTATGCACCAGCACATGTCACCGACAGTTTATGAGATGGCAGCCCTCACACAAGACTTAGACACGCAGGTTATAACTACAAAAATAAAAGAAGCTCTATTGGCTAACAATATAGGACAGAAAATCTTTGGCGAAGCTGTTTTAGGACTCTCTCAAGGATCAGTTTCAGAGTTACTCTCGAAACCAAAGCCATGGCACATGCTGAGCATTAAGGGTCGGGAACCCTTTATTCGTATGCAACTTTGGCTTTCGGATGCAAACAATGTAGAACGACTGCAGGTTCTAAAGAATGAACGTCGTGAAGCAAGCAAGCGACGTCGATCTACTGGTCCCAATCAACAAGACAACAGCTCCGATACAAGCAGCAATGATACCGCTGACTTTTACACCAGCAGCCCTGGTCCTGGTTCAGTTGGTTCAGTTGGCGCTCCACCAAACAAAAAACAACGTGTACTCTTTTCCGAGGAACAGAAAGAAGCTCTACGCTTGGCCTTTGCTCTGGATCCATATCCAAATGTTGGAACCATTGAATTTCTGGCTAACGAGTTGGGTCTGGCAACACGAACCATCACAAACTGGTTTCACAATCACCGAATGCGCCTAAAGCAGCAGGTGCCTCATGGCCAGCCTTCAGAACCAGTTCCTAGTCGAGAAAATACTAACGCAACACCCTTCGATCCAATCCAATTCCGTATACTTTTGAATCAAAGACTGATGGAATTGCAAAAAGAGCGTATGGGTCTCAGTGGCGCCCCCATGCCTTACCCACCGTATTTTGCTGCCAACCCAAACCTGGCGGCACTAATTGGTCGTGGTTTACTTCCTGGTGGAACAGAACCTGACCTACAAGCCCTAAACAACGCCTTTAAGGAACAAATGAGTGGTCTCGACCTTTCCCTTAAAAGAGAACGAGATGGAGACTATGACGACGATGGTGAAGATGAATCGCATCTATCTGACAACGAGTCGATCAATGAAAGTGATGAAAAATCAGAAATGAGTGAAACTCCGAGATCTTCATTATATGGCAATATTGGCCAGTCTCGAACATCACGACGTAAGCCCGCTGCCCCTCAATGGGTGAATCCTGACTGGCAAGGTGATGGCAAAACAGGATTAGTGCCTCCAATTACAGCAGGTGGTCCTAACGACAAGGAAGTCATAATAAACGGTGTCTGTGTAATGCAACAACAAGCTGCTGACTACAGCCAAAAATCAGGAAATGGGGAAGACGACGAAGAATGCCCTTCCGATGCCAACGACGAAGAACCTACAACCCACCATCGTGGCCAGTCCTCCGACTGCGAAGATGCTCGGGCTGACATCGACCAGAGGTTTATGGAACCCGAAGTTCGAATTAAGCAAGAAGAAGACTGTGACACCAACGATAGCCACCAAGATGACTTGGACTTAAGAAAACAACAACACCACCATCAGGACGAAGATGATGATACTCCTGGTGCATGGAATTATTAG
Protein Sequence
MQLKFKQNNIDMPSILNWHKLQLDYMIKALIAEVNRLQTLHESHIVQIQRLEDNLEVKRQHILKLETRLQKQPQLFKNAEASAVEPVSCPEEKESISIVSSEPPTTVEEIQVKKENQLPSTTSDITSQPEASVNDPKHFQELIIERTKALAVAAHASNETLKGEGISSDTTVATADPETIKTCDNEPSSCEVSNNNLDANVQHQQDLQSSCESAAVSEHIPSSNFQSVDQFGSLLGGELVNSYWRRGFEHLPLAPQISMPLQQPSPATTIASAAVSIAAHSPPTITTTHPTSETPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRTDSHPTSSTTTTGSHLQQPPLHHHQHLHHQHQHPSLQHHQQQQHHHQDFEKANSHHDSSSTASTPNLQDQRSNDGHITGSKSAKSQEDNNNSLGSLTHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGSQLQQQMKHESQRHYQQPSSSIDDEQSNDDSKSPHASCTSPFYKESPVQQQQQQQQQQQIQQRQEAQRRSAKPDEMSQDKMARIYQEELQKLMTRNPRDAFPSFLFPHFLSATGGLPPASSTIPPDDNIRMALEAYHREMAKLQQNNSGSIPNFPNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRHSLESCDSSSNQTKETAEEAAQRHSSAFSLVRLKPDAAPAPNSIPNPNTNSAAPSPLSNSILPPAMTANEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHIMQQMQAASAMAAAAAAGHLQNAQHQGMLLTTPGLPPQHAISLQQAAANAAANEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPIQFRILLNQRLMELQKERMGLSGAPMPYPPYFAANPNLAALIGRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSEMSETPRSSLYGNIGQSRTSRRKPAAPQWVNPDWQGDGKTGLVPPITAGGPNDKEVIINGVCVMQQQAADYSQKSGNGEDDEECPSDANDEEPTTHHRGQSSDCEDARADIDQRFMEPEVRIKQEEDCDTNDSHQDDLDLRKQQHHHQDEDDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_00665523;
80% Identity
iTF_00665523;