Basic Information

Gene Symbol
osa
Assembly
GCA_026256485.1
Location
JAGTYB010000050.1:1947191-1957423[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-25 2.2e-21 76.8 0.0 3 89 500 586 498 586 0.91

Sequence Information

Coding Sequence
ATGGACTTAATCCTCTGTACTTTGTTGAAAgaacttattggtcaaaatagcaacgatagttcaagtggtggaggtgtcagtggcttgggctccggccctcctggtacaccaacaccccaacaagtgatgcgacctaccccttcaccaactggttcatcaggctcaagatcaatgtctcctgctgttgtgcaaaatttgcctatttcgcgtccatcgagtaatcaatctcagccgggccagcaaatgccaccAACAACTGCGAGTCATATGTCCCATGGCAGTAGTGCATCAATTGCCGGCATTCAACAGCAATCTCAGCCACCAGGGCTGCCTCCGGTGTCGTCTGGAAATTCTCAACAATCGCCAGCGTCACAGCAACAAACTCCCCCAAATCAATCTGTGAACAGTATGTCAGCGCAAGGTAGCTATCAATCACAACCTCCACCACTTTCTCATATGCATGGCTATAAAATGGGACCGGGTTCAGGGCAAAGCCCCGGCTCAGCCCCACAAAATATGCCTCCATATCCACCGCCGCCACAACCGCAACAATATTCCCAAGgaaattacccgcctcgtccacaatatccaagcagctatgcaccaacaccatccacaaatcaaccgtcatctgccaacactatgccacctggaccaaatcaatatccaggccgacctttgcccaaccacagtggcagtcagcacacgcagttcccgccatatcagcagaattgggtaccaccatcgccacaaagtcatgcaggtatgatgggcaatcatgtgcaaggcaagggtacaccaccaccacctccacaagcgaacgtcgttggctctccgcgacctctcaactacctgaagcagcacctgcaacataagggcagctacgtgggaggctctagtccaactccgcctcaaggttacggcaatgggccggcgggtagtatgcatttgccaatgggtccaccccatcacatgggcccgccacacggtccaacgaatatgggaccaccaacatcgggcctacaacaaggtggaccaccatcggcacaagtacccaccgatggtagctcgacaccggatcatggtgtaatttctcaagataatggcattacatcatcgggttccgcggcggccagcacgcatccagtgacctccgttgtgacaacgggtcccgatggcactccgttggatgaggccagccaacaaagtacactgtcaaacgcttcagcagcatctggtgaagatcctcaatgtacaacaccgaaatcacggaaaaatgatccatacagccaaagtcatttagcgccaccaagcacatcgcccggtggtcatcctcacaatgaggattttgaaatgaattcgccaccaaattggtcacgaacacccgctagtccgcaggttttcaatagccacgttcctcaagaaacttaccggacatcaacaaagaaatccgatagtttgtgcaagctctacgacatggatgagaacccagatcgtcgaggctggcttgataaattgcttagctttatggaggaacgacgaacaccaataacggcatgtccgaccatttcaaagcagcctttagatttatataggttatatatttatgtaaaagaacgaggaggattcgtcgaggtatgcaaggttacaaaaagcaaaacatggaaggatattgctgggcttctgggaatcggagcgagtagtagcgcagcttatactctgcgaaaacactacaccaaaaatcttttggcatttgaatgtcatttcgatcggggagacattgatccattgccaataatacaacaagtcgaggctggttccaaaaagaaatctgccaaagctgcatcagttccatcaccagCTggctcttcgaactcccaggactcgttcccggcaccggtggcggcgaacacaactattgatagttatccgggttatccgagtggttatccttctggagcacagcccgattacaatgcaggtgctcaaatccaaaggccaccgtcacaaactaacgcacaaacccctcatgcagGAAATACTCAAGCAACAGCTGGTGATAATATTAGTGTCAGCAATCCTTTTGATGACCCGGTAGGTGCACAGCCTCGTGCCCCTTATCAACAGGGTAGTACATATCCTCCGGTGTCTAGATCGCAAGGTATTAATTAA
Protein Sequence
MDLILCTLLKELIGQNSNDSSSGGGVSGLGSGPPGTPTPQQVMRPTPSPTGSSGSRSMSPAVVQNLPISRPSSNQSQPGQQMPPTTASHMSHGSSASIAGIQQQSQPPGLPPVSSGNSQQSPASQQQTPPNQSVNSMSAQGSYQSQPPPLSHMHGYKMGPGSGQSPGSAPQNMPPYPPPPQPQQYSQGNYPPRPQYPSSYAPTPSTNQPSSANTMPPGPNQYPGRPLPNHSGSQHTQFPPYQQNWVPPSPQSHAGMMGNHVQGKGTPPPPPQANVVGSPRPLNYLKQHLQHKGSYVGGSSPTPPQGYGNGPAGSMHLPMGPPHHMGPPHGPTNMGPPTSGLQQGGPPSAQVPTDGSSTPDHGVISQDNGITSSGSAAASTHPVTSVVTTGPDGTPLDEASQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPGGHPHNEDFEMNSPPNWSRTPASPQVFNSHVPQETYRTSTKKSDSLCKLYDMDENPDRRGWLDKLLSFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKSAKAASVPSPAGSSNSQDSFPAPVAANTTIDSYPGYPSGYPSGAQPDYNAGAQIQRPPSQTNAQTPHAGNTQATAGDNISVSNPFDDPVGAQPRAPYQQGSTYPPVSRSQGIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00426899;
90% Identity
iTF_00426899;
80% Identity
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