Basic Information

Gene Symbol
Arid4b
Assembly
GCA_026256485.1
Location
JAGTYB010000307.1:156776-170401[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-28 2.8e-24 86.1 0.1 1 89 294 380 294 380 0.95

Sequence Information

Coding Sequence
ATGCAGCAAGTGGATGATCCACCATCGTTACCCGTTGGAACGGAGGTTAGCGCAAAATATAAAGGAGCCTTTTGCGAGGCTAAAGTTCGCAAAGTAGTTCGTAATATAAAAGTGAAGGTCGCCTTCAAGCATGGCCTTGGTTCGGGTGTTGTCTCCGATGACGCTATTAAGTCGGGACAGCTTCGAGTCGGTGCGACTGTCGAAGTTAAGCATCCCGATCGGCGGGAGAATGTCGAGGGAACAGTCATGAAGATTCAAGACTGTTCTCAGTATACTGTTGTTTTTGATGATGGAGATATAACGACTTTAAGACGAACTGCACTTTGTTTGAAGAGTGGTCGTCATTTTAATGAAAGTGAAACTTTGGATCAGTTGCCACTGACCCATCCGGAGCATTTTGGAAATCCAGTTGTTGGCGGGAGGAGGGGAAGGAGATCGCGTCATTTGCATGACGATAGTTCGGATGATGATGATGAAAGTGATGCTAAGGAAGTTATTAATGAAAAAGAAGAAAACATTGGGAAAGTTGTTTGCGTCGAATCGACGGATAGTAAGAAGAAGGATAAGGAAAAGTGGTTCCCGGGATTGGTAGTGTCGCCAACGGCACAAGTCACAGTTCGAATTCGAGTTAAGGATGAATATTTGGTACGTTCGTTTAAAGATGGACGTTATTATACTGTCCCGAAGAAGGAGGCCATGGAGTTTACTAGGGAACAGGCTCATAAACAAGATAATGGGGCTGTGCAAGCTGCTCTGGAGTACTTGGACAGCGGTGTTCTACCCACCCATTGGGATCGAGATTCACTCTTTGGACTAGCCAACTCCTCGAGTGAATATGAAGAAGTCGATTCTGACAGTTCCGATGATGAACCAAGCGAAGAAAAGGATCTTTTCATAGCGCAACTATACAAGTACATGGATGACCGTGGAACGCCTTTGAACAAGGTGCCATCAATTCAAAATCGAGATGTTGATTTTTACCGTCTCTTCCGGGCAGTTCAAAAACTCGGTGGCTATAACCGTGTTACCAGTCAAAATCAATGGAAGTCTATAACCATACGTCTAGGATTCACCCCAATTACAGTTAGTGTAACTAATCTAGTAAAACAAGCCTACAAAAAGTTCTTGCAACCATATGAAGATTTTCATAGAAAACTCGGTTGTTCAATGCTAATGACACCACGCAATGCCAATCGCACAAAAGGCCGAAGCTTAGTGCGTGCCAATTCGGTGGCCTCTCCAAAGCCAGCTGACACAAACAAAGAGGAAAAGAAACCAACAAGTTCTTCGATTCCAGGACCATCGACTTCAGCTGCTGTTGCTGTAAATCCTCCGCCAACTAACGATGAATCTGAGAATACAAGTGAGTCGAGTGTAGAAGTGGTAACAGTTGCCAAGGCAGCTACCAAAAGGAAATCATCCGTTGGTGCTGGCAAAGTCAAGAGTTTAGTCGAGAAATTCGAAGAGAAAGCCAAGGAGGAATGTGACATTCCTTTGGCAAAGATTCAAAAAAGCAATCAACGTTCAACTGAACGAAAGAGTTCAGAGACTCCCAATACAACCAGAGAGAATTCACCCACAGGATCTGTTGGTAAGTTTAAAATTGGGGCTACATTTGCTTTTATTTGTTTACATTTTATCTTTATTTTCCTTTCAGGAGCAACAAATAAAAAAGAAAAACAAAAGAAAATACCAGTCGAAGAGAAACGAGGTCCAAAACCTAAGAAAAAGGATGAAAATCCAGAAAAGACAGATACTGGTGACTTCCCCGTTGAAGTTGGTGACAAATTGAAGGTTTATTATCACGAGAAAAAGGTCACCTACGAAGCTAAGGTCATTGAGATCTCTGTGACCCGTGGATCGCCTCTTTATTTAGTCCACTATACTGGCTGGAATAATCGTTATGATGAATGGGTCCCACGAGAGAGGATCGCCGAGAACCTTACCAACAACAAACTCAAAAAGACTCGAGTTGGCGGGGCATTGGACAAGGGTAAAGTTGAAAAATCTGAAAACCCACCTAAACCTCCATCAGTAAACTCCCCGGCAGCAGGGAAAACTCCCTCATCGTCTGTTAAGAGAGGTCGTGGTCGAAGTGACTCACAACCGCCACGTTCCACAACACCTTGCTCAGTGGCATCTAATTCAAGTCGCACCAAATCTCCAGCAGCCTCTAACGCACAGAAGAGAACTCCCAGACAAATTCCCAGCGCAATGAGACGCACTTCGAATAATGTCTCGGATGTTTCAATGCAAACTTCATCTGATAGCGACTCGGATGAGCCAGTTCGAAGGCCAACACGTGCCACACGAGATTCCAAAGGCAAAGTAACACAAGCTTCTCGAGGAAAATCTCCAGCTTCCGTTACAGCTACTTCAGCAAAATCCAATAGTGCAAGTGAGAGTGAAGATGAGGAAGAAGCCGATGACGAAGAGATGCCTGAAACTTCAAATTCCAGCGCCAAGGGTCGGGATTATGATCTCAATCAAATTAGATCCGAGTTGAAGGGTTTCCAAGAGCTAAAGTCCCCAACTTCTGATCCCGAAACTGATAATCCTGATCAACAAGACTCAAAATCGGAGTCTTTATTCGATTTCAAGCCTAAAGAAGAGGAATCTTCTGACCAAAAACACGATGAGACAACAAAGTCCTCCGATTCGGATTCATCTTCTGATGGCACTGATTCATTTGCCGATGATGATTCTCAGTCCTCAGATAAAACAACAACTCTTGAAAATATGACAGAGAAGTTGCAATTAAAGATAAATGCCGACAAGAAGGCTTTGTTGGAGAAATTCCCAATGGGAAAAGTTCCAGAAAAAGCAGCTCCATCTAGAATTGAAAAGATCATAAAGGAATCTCTGGCTGAGAAGCGACAGGAGAGTCTTAAAGCAAAACCATTTATTGCTGAGGAAACCCTCAAAATGCCGAAATCCGAAGTTAAGCTGGAACCAATTGAGTCGGTGTCACCTCCAGCTGAGAAGAAACCTTTCCCTATGATTTTAGAATCTGCTACAAAACCAACTGTCAATCTTACCAGAATTGGAAAATATCCAGTTATCATTGATAAACCCTTAACACTCAAGGAACCACCACCAGAACCTGTTTCTGATCCTCTTAAACTTGAAGAACCAACTGATATCAAAGAGGTTATCCAAGCTCCTCCACCACCTCAACCAACTTCTGATATCTATGAGTTTAAAGAACCAGAACCATTTGAATTTGAAGTCAGAAAGGCACCTACACCTTCTGCAGGAACAGCAGATTCTAAGAAGAAATCAGTGGTTGTGGCAGTTTCGAAGATACAACCAGAACAGCCGACAGTCTCTCCAATGACTTCTTCATTTGGTAAAAAGAAGAAGGCTTCTCCGATTAAGGAGTCCCCAGAAAAACCGAAGCAGCTTAAAACAGAAGAAAAGATATCAGTATCAAGCCTCTCAGCAGCCATGAGCAACTTGTTGACTCCACAGAAAAATGAAACCACGTTGTTTGATGCTTTGAGGAAGTCACCGAGCTTTAATTTGAACTTTAATGCACTCCATGAAGAACTTGCGACTACAGTTCAAGAAACTACTCGAGCTCTAACTGATGTTCCTCCTCCAGAGCAGTTAACTCCCACTAAGTGCGGTGAGGAACCAGCAGATAGTACTGCTTGCGTTGTTGGAAGTCCATTTATCGAGACTACTTGTGATCTATCGAATGTCTTTGAACTTAACCAAGACGCTGAAGGCTTAACGAGCAGTGACGAAGCCAAGGATAATAAATTTGAGCTTGAAAATGTTAAAATTCTTCTCTGTGATTCATCATTCGATTTGGAACCCATCAAAGTGGAGAAGCCATCATCAATTGCTGACAAAGTTTTAAGAGCCATCTCTCAGAAGAAGGAAGAAGAGGAAAAGAATAAATGTGAAGTCACTACGAAGCTTGAAGAAGTCAAGCCAAAGGAGCTTGTTAAAGAAGTGGAAGAGATCAAGATCGAAGAAGATAATCTCCCCAGCACAAGCAACAGTAGTAGTAGCAATAGCAGCAGCAGTGCCATTAGTACTTCGCCATTCATCACCGAACCGCCAAAGATTGAAGATGTCACTTGCACTTTGGTTAAGAGTGATTTTGAAATACCAACCAAACGATCGTTGCTTGCAAGTCCTGAACCCAAAATTGGAATTCTCGAGTCAATCCCAGTGAAAAATAATGTTCTCAATGAAACCATACAAAAGCTGGAATGTGCAATTCAAAAGACAACTGCGGCGCCCAGTGTGGATCATTTTGTCGAAGAATCATCGGATAGTAATGATTCGGAACAACGATTGATTATAGAAGATGAAGAGGATCCTCCAGAAACTTCAAGAACAATCACTCCGGTAGAAGTTAAACCACAACCAGTGGAAGTGAAAAAGGTCGTCGAGGAACCACCTAAACCTTGTGTGGTTGCTGTAGTTGAGGAAGTCGAAATGAAGGTCGATGAAGTCGAGAAGAAAGAAGAACAACCTCCACAAGTTGAAATAAAACCAATTGAAGCTCCTCCTCCTCCTCCTGTTGCTGTTCTTCCTGCATCAATTGTGAAATTAGCTTCGCCTGTAACTATACAGCCGGTGCAAGTTCTTCCTCAGCCTAAACTCCCGTCCCCAGTTATTGTTAAGCCACTTGTCGTGCCGAGCATCTTTAACATCCCACAAACCTTTTATTCGGATCCAAATCTTCAACCAGAAGATGGTGTTAAGCCAATATTTGATATAAGACCAGTTGAAGTTTGTGCTTTGCAACCACCCGAAAGGCCACAACTGGAACCTGTTGCGATTATCGAACAGGTAGTTCCAGTTCCACCGCAACAAGTTGAAGTTAAAAAAGATGACCAAGCAGCTGAGAGTTTGAATTTACACAGTGAATCAATTAATCTTCTTTTATGCGAAGAAACTATTCCCGGAAGTCCATGTTCGATGGTTGGCAAAGATGTATTAGATCCGTTGGCCATATGTAGAGGTAACTCTCATCCGACTGAGTCGGATATTAAACCAGTTCCAATGGATATTGAGTGTTCGGCGCCAATGAGTAAGCCCCCACCACCAATGGAAGCTCCAACAATGAAGCCAGGTCCAACTCCGAGCAGTTCGCCAAATGACTCTGCCAGTCAGGACGAGAGTGGCGAAGAGTTGAAGAAACAAGCAGATATTGAGAATGAAGTGTCTCCGAAGAAGAGGCGACGAACTAGGAAGCAATCGGAGATGATGATGGAATCACAAGCAAAGAGAAGAAGACCACTTACATCGGTTAAGAAGAATAATGGTTCTGATAGTGAGGATAATTCGGATACCATTTCTCAGCGATCGTCATCTTCTCGCCATAACAGACCTTGTCAGTATAATTTCCTCGTGCAATTGGATCCCGCAATGAATCCCGATCAAAGAATATCAATTCTTCTTAAACAAATCCAAGATCTCCGAAAGACTTATAACATGATTAAAGGCGATTTGGCTAGCATTGATCGTCGACGTAAAAAAATGCGACGAAGGGAACGTGAAAAGAAACAAATGCAATTGCATCAGGCAGCAATTAAAATTAATTCTTAA
Protein Sequence
MQQVDDPPSLPVGTEVSAKYKGAFCEAKVRKVVRNIKVKVAFKHGLGSGVVSDDAIKSGQLRVGATVEVKHPDRRENVEGTVMKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRHLHDDSSDDDDESDAKEVINEKEENIGKVVCVESTDSKKKDKEKWFPGLVVSPTAQVTVRIRVKDEYLVRSFKDGRYYTVPKKEAMEFTREQAHKQDNGAVQAALEYLDSGVLPTHWDRDSLFGLANSSSEYEEVDSDSSDDEPSEEKDLFIAQLYKYMDDRGTPLNKVPSIQNRDVDFYRLFRAVQKLGGYNRVTSQNQWKSITIRLGFTPITVSVTNLVKQAYKKFLQPYEDFHRKLGCSMLMTPRNANRTKGRSLVRANSVASPKPADTNKEEKKPTSSSIPGPSTSAAVAVNPPPTNDESENTSESSVEVVTVAKAATKRKSSVGAGKVKSLVEKFEEKAKEECDIPLAKIQKSNQRSTERKSSETPNTTRENSPTGSVGKFKIGATFAFICLHFIFIFLSGATNKKEKQKKIPVEEKRGPKPKKKDENPEKTDTGDFPVEVGDKLKVYYHEKKVTYEAKVIEISVTRGSPLYLVHYTGWNNRYDEWVPRERIAENLTNNKLKKTRVGGALDKGKVEKSENPPKPPSVNSPAAGKTPSSSVKRGRGRSDSQPPRSTTPCSVASNSSRTKSPAASNAQKRTPRQIPSAMRRTSNNVSDVSMQTSSDSDSDEPVRRPTRATRDSKGKVTQASRGKSPASVTATSAKSNSASESEDEEEADDEEMPETSNSSAKGRDYDLNQIRSELKGFQELKSPTSDPETDNPDQQDSKSESLFDFKPKEEESSDQKHDETTKSSDSDSSSDGTDSFADDDSQSSDKTTTLENMTEKLQLKINADKKALLEKFPMGKVPEKAAPSRIEKIIKESLAEKRQESLKAKPFIAEETLKMPKSEVKLEPIESVSPPAEKKPFPMILESATKPTVNLTRIGKYPVIIDKPLTLKEPPPEPVSDPLKLEEPTDIKEVIQAPPPPQPTSDIYEFKEPEPFEFEVRKAPTPSAGTADSKKKSVVVAVSKIQPEQPTVSPMTSSFGKKKKASPIKESPEKPKQLKTEEKISVSSLSAAMSNLLTPQKNETTLFDALRKSPSFNLNFNALHEELATTVQETTRALTDVPPPEQLTPTKCGEEPADSTACVVGSPFIETTCDLSNVFELNQDAEGLTSSDEAKDNKFELENVKILLCDSSFDLEPIKVEKPSSIADKVLRAISQKKEEEEKNKCEVTTKLEEVKPKELVKEVEEIKIEEDNLPSTSNSSSSNSSSSAISTSPFITEPPKIEDVTCTLVKSDFEIPTKRSLLASPEPKIGILESIPVKNNVLNETIQKLECAIQKTTAAPSVDHFVEESSDSNDSEQRLIIEDEEDPPETSRTITPVEVKPQPVEVKKVVEEPPKPCVVAVVEEVEMKVDEVEKKEEQPPQVEIKPIEAPPPPPVAVLPASIVKLASPVTIQPVQVLPQPKLPSPVIVKPLVVPSIFNIPQTFYSDPNLQPEDGVKPIFDIRPVEVCALQPPERPQLEPVAIIEQVVPVPPQQVEVKKDDQAAESLNLHSESINLLLCEETIPGSPCSMVGKDVLDPLAICRGNSHPTESDIKPVPMDIECSAPMSKPPPPMEAPTMKPGPTPSSSPNDSASQDESGEELKKQADIENEVSPKKRRRTRKQSEMMMESQAKRRRPLTSVKKNNGSDSEDNSDTISQRSSSSRHNRPCQYNFLVQLDPAMNPDQRISILLKQIQDLRKTYNMIKGDLASIDRRRKKMRRREREKKQMQLHQAAIKINS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2