Basic Information

Gene Symbol
grn
Assembly
GCA_947049305.1
Location
CAMRIP010000220.1:217608-234844[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-20 5.5e-16 58.7 4.7 1 35 286 319 286 320 0.98

Sequence Information

Coding Sequence
ATGCCATCGTCACATACATCGCCTCAGGTATGCCGACCACACTTTCATCCGCCCTTAAGTTCGTGGCTAACCAGCGATCATAAATCATTTCCGCCTGGCAGTCCGTGGGGTAGTCCGTTTGCATGTCCACAGGATCCGCAGGATAAAATTGGCGGTCAAATACAAAGCCATCAAACGGGCCAGCATTCATTTCCATTCCCTCCAACACCGCCAAAGGACTCAACGCCCGATTCAGTACAAACAGGCCCATCCGAATATCAGgcTGCTGTGAACGCATTTATGCATCAAGCACAAGCATCAACTACCTCACTTAACGATACGAGTTGCGCTTTGGATATTAAACCAACGATACCAAACGGTAATGGTGGCATTGGAGGCGGTGGAGGTGGTGGCATCGGTGGAGTATCAAATCAAGTTCCTGCGCCCAAACAACGTGAAGGTACGAATGCTGGTAACAGTAAtagcaataacaacaacaataataccACCAGCAATAATCACAATACGCATGGGGCTagcaatattaataataataataataacaataataataataatcatacaacaagtaataataataacaacaacaacaattcagCATTAAATGGTGGTGCAAGCAGCATATTTGATAGTACACATCAAGCTGCATACGGGGTAGGTGGCGGTGTAGGTGGAGGCAGTGTTGGTTATGATTCTAGTTATGCTGCAGCatatcaccatcaccatcatcaccaCTCTCACCATCAAGCAGCAACGGCTGGAATGTTTCAAAATGCAGCCAGGCAAGCGGGTATGAGCAGCCAAGATGTGAAACCACAAAGGACGAAGCCACGCACAAGTGCCGAAGGCCGAGAATGTGTAAATTGTGGCGCCACATCAACGCCATTATGGCGAAGAGACGGAACCGGACATTATCTCTGCAATGCATGCGGACTGTATTACAAAATGAATGGACAAAATCGACCTCTGATAAAGCCAAAGCGAAGACTGatgcgTGGCGCCATCACCTCCATATCATCGTATCCAAGCCAGAGACCCCAAATTGACACGAAAGATTATAGTGCGCCTATATTGACTATATCTGATAGCCATCTGCATCTCTATTCTTTACCTGTAAATGCATATCATCATATGGGGCCCCTCCTCTCTGGTGCTTCtgcggctgctgctgctgctggttgGTGA
Protein Sequence
MPSSHTSPQVCRPHFHPPLSSWLTSDHKSFPPGSPWGSPFACPQDPQDKIGGQIQSHQTGQHSFPFPPTPPKDSTPDSVQTGPSEYQAAVNAFMHQAQASTTSLNDTSCALDIKPTIPNGNGGIGGGGGGGIGGVSNQVPAPKQREGTNAGNSNSNNNNNNTTSNNHNTHGASNINNNNNNNNNNNHTTSNNNNNNNNSALNGGASSIFDSTHQAAYGVGGGVGGGSVGYDSSYAAAYHHHHHHHSHHQAATAGMFQNAARQAGMSSQDVKPQRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLMRGAITSISSYPSQRPQIDTKDYSAPILTISDSHLHLYSLPVNAYHHMGPLLSGASAAAAAAGW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00894432;
90% Identity
iTF_00894432;
80% Identity
-