Basic Information

Insect: Epistrophella euchroma
Gene Symbol: RREB1
Assembly: GCA_947049305.1
Location: CAMRIP010000196.1:886779-893908[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.035 4.3 8.8 0.8 1 21 233 253 233 255 0.93

2 14 0.00032 0.04 15.2 0.2 1 23 265 287 265 287 0.98

3 14 9.3e-06 0.0012 20.0 5.2 1 23 293 315 293 315 0.98

4 14 0.023 2.9 9.3 5.5 2 22 517 537 517 537 0.95

5 14 0.0068 0.85 11.0 0.1 1 20 580 599 580 601 0.93

6 14 0.0086 1.1 10.7 0.1 1 23 749 771 749 771 0.97

7 14 0.00017 0.022 16.0 1.7 1 23 780 802 780 802 0.99

8 14 0.00045 0.056 14.7 2.0 1 23 808 831 808 831 0.97

9 14 0.00092 0.11 13.8 2.1 1 23 1180 1203 1180 1203 0.95

10 14 8.3e-05 0.01 17.0 0.3 2 23 1512 1533 1511 1533 0.97

11 14 0.14 17 6.9 6.3 1 23 1539 1562 1539 1562 0.97

12 14 2.9 3.6e+02 2.7 6.3 1 23 1665 1687 1665 1688 0.95

13 14 0.081 10 7.6 1.1 3 23 1737 1757 1736 1757 0.91

14 14 0.0013 0.17 13.2 4.8 1 23 1763 1785 1763 1785 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.035	4.3	8.8	0.8	1	21	233	253	233	255	0.93
2	14	0.00032	0.04	15.2	0.2	1	23	265	287	265	287	0.98
3	14	9.3e-06	0.0012	20.0	5.2	1	23	293	315	293	315	0.98
4	14	0.023	2.9	9.3	5.5	2	22	517	537	517	537	0.95
5	14	0.0068	0.85	11.0	0.1	1	20	580	599	580	601	0.93
6	14	0.0086	1.1	10.7	0.1	1	23	749	771	749	771	0.97
7	14	0.00017	0.022	16.0	1.7	1	23	780	802	780	802	0.99
8	14	0.00045	0.056	14.7	2.0	1	23	808	831	808	831	0.97
9	14	0.00092	0.11	13.8	2.1	1	23	1180	1203	1180	1203	0.95
10	14	8.3e-05	0.01	17.0	0.3	2	23	1512	1533	1511	1533	0.97
11	14	0.14	17	6.9	6.3	1	23	1539	1562	1539	1562	0.97
12	14	2.9	3.6e+02	2.7	6.3	1	23	1665	1687	1665	1688	0.95
13	14	0.081	10	7.6	1.1	3	23	1737	1757	1736	1757	0.91
14	14	0.0013	0.17	13.2	4.8	1	23	1763	1785	1763	1785	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACATCGATTAAGAAAGAATTAAGTGATATTTCATTGCGAAAAATGGATCGACGACAGTCAACAACATCAGATTCATCTGTTGAACCCATGGACTTGGGTcgatcaaattcaaaaatatccaCAGATATGAAAGATCATAGCAGCACAACATTGCCAACATCAACACAAATTAAAGATGCCATTTTATCAGATGCCAATAATAAGTATCGCTATGAATCCGATGCCGACGAATCTGCCGATGATAGAGATCAACAAAGAAGATCTCATAGTCAACATCACTACCACCATCGTCGGCGTGGCAATACGGCAGGACGCGACAAACGTACTGTTCTCATGGAATGCACCGATAGTCCACATTCATTGCGAAAGAAATTTCGATTCAGCAACAGCAATCACCATAATTCTATGCCTGATACTGtgatcaatttaaaaacaaaaacatcgaaTAATGATTCAACAAAATCAACAACTACAGCTCCAGCAAATCTTACAGCAACAACAAACAACGAATCAGGATTTGTGGATGCGAGCATAAGTCATGTTTTAAATACGTCAGGTTCGTCGGCGACATCATCCACATCATCATCGTCGCCGACTTCATCATCATCTGCCTCACCATCTGCAAGTAATGTAGCGTCGGCCATATCGAGCCCAGAATCGAACATGGGTGAACGTGACGATATGAAGTACCTTTGCCCAATTTGTGAAGTTGTGTCGGCGACACCGCATGAATTCACCAATCATATTCGGTGTCATAATTATTCATCTGGGGACACCGAAAATTTCACTTGCCGCATATGCTCCAAGGTTCTATCATCGGCCTCTTCATTGGATCGGCACGTTTTGGTACACACTGGTGAGCGGCCCTTTAATTGCAAGTATTGCCAATTGACATTCACTACAAATGGCAATATGCACCGTCACATGCGAACCCACAAACAACACCAGCAACATTATCATCGCAATTCAAATGGTACAAAAGGTGCAAATGGTAGCAACGCAAGCTTATTGCCAGTTCAAACACTAACAGATCCATCGCCAGCAACTCAAACATCAGCCGCTGTTAGTGTTTTACCTTCAAAAACGGCCACAAACATAGGCAATGGTGCTGTTTGTAATAGCAATGGTGACACAATTGGGGGTGGAGGAGATGGTTGTGGTGGCGAAAGCTATGACAGTGATGGTGGTTGCTCAACAGACTCATCGAGTGGCATCAGCCAAAGttccaataacaacaacaacagcaatacAAACAACAATAATATAAGCAATTTTAAACGCAAGAGCACCGATAGCTTGGATGACTTGGCCATTATGAAACGACGCGTGAAGACCAcgatcaacaacaacaacattatCGATAACACTATTCACGCCATCCCAGAGAAGAGTGGAATCGAATTACCTTTACCAGATGCTATCGAAAatttaaagcaacaacaacaaaagctaTTTTGCCCGGTATGCAATCGTGATGATTTTGGAGGGATGCTTGCATTGGGCGATCATATGGACAGCGATCATTCTGATATTCCGGCTAAGTGTCGTCATTGTGATGTAGTTTTTAGAACCCACAAACAGCTAAACGTACATCGATGCACCAGTAAATTTCAAATTACACAAGGTTTTAAGGACCTGACGTTTGTTGACTGCCCTAGCGAGAAATTCCCGCTAGTTGCAAAGTCTCTGTGCGAGCAGAGTACTCGGGTGCCAATTGGAGGTCAAAAGTTCGAATGTTCCAAGTGTTACCGAGCATTTTCATCTGCTAGTTCAGTTGAAATTCACGAGAAAGACTGTACGACATCAGGTTTGAATCTTTTCGTAGACTCTCCCAATCGAAAGCAAAGAGCTTACAGCGAAAGCTCAGCAAATGCAGACGATGATGACAATCGAAGAGAGGAGTTTTTTAATCGGCTGTACTTAACGAACAAATCCACAGCACAAAGCATGACAAGTTTATCAGTTTCCTCACCATCTCTGTCCGATGTTAAGTCTTCCGAGCTTGACAAGACGCCTGCTAAGAATTCCCAATTAGAACAGTTCCAGGACACAAAGGAACTCGCTGATATTCAATCAATTCTCAATATAACTTCGTCATCATCAACATGCAATTttttgcgtaattttgaaaattcagtaAATGCGCCAATTAGTAATTATGGTGCTGAAAACGGTGAAGAGGAAGCTCAAGATGCGTTCACTTCTGAGTTTCGAAAAATGAAACTGCGTGGCGAATTTCCGTGCAAGCTCTGCACTGCTGTGTTTCCCAATTTGCGAGCACTCAAAGGCCATAACAGAATACATCTAAGTGCCGCTGGTCCAGGGCCTTACCGATGCAATATGTGCACATATTCGATTCATGATAAAGCAGCTCTCGTCCGACACATGCGCACACATAACGGCGATAGACCTTACGAGTGTGCCATCTGTAATTATGCATTCACAACAAAGGCCAATTGTGAAAGGCATTTACGAAATCGTCACGCGAAGACTACACGAGACGAGGTAAAACGTGCCATTATTTATCATCCATCAGAAGACTCAAACTGTGACGATGCCATGAAAAAGTTGCATATGTTTTCGTCCCCCGAATTTGATCAAGACGACATGGAGCAACATCATCCGCCAAAAGATCGATCAACACCGGTTTCGCATCTGAAGGAAATGCTTCAAGCCGAGTCTAAGCCCATGAAAATCCAAGTGAAGAGCCTTGAGAAGTTGATTGATAAACCATCGTTTAATCAACCTGATGAACTCGAAAAGGAACATGAGCCAATAATACCCGAACAAGAAAAAGAGATAAGCAGACCTATTGATCTCAGCATGGATGCATTGGATTTGAGCAAAAAATCtgtgaaaactgaaaaaatcgaaGAGAAAAGAGCTCAAACTCCTCCTCTACCACCACCAGTGCCACGCATAAATCCAGCCCACATTCAAACAGACGAGCCCAATATACTAGATATGCGATTACTTGAGAAGAACCAACAGCTCCTTCTGGCTCAGCAAAGACTTCTCAATGAAGCAATGCCAAACATGGACCCCGCACGGTTTTTTCAACTGTCGCAGCTCTACAACAACTTGTTGTTTCAGCCGCTTAAtccgtttttattaaaaaactcatTTCTTTCAAATAACATCAGTGATTTGAATAAATTTGCTCCCATGGTGAATCCTCTTTATAATGGAACCCCTGTAGAGAGCCCGATCTCACGcgctgaaaaacaaaatcaacaaatttcACTACCGAAGCCCGTCCAAGATGAGGTCCATTCATCAACAAAACAAGTTAACACCCAAACTCAATCACCAGTGCCTGCTCAAAGTCAGCCATTACCACGGAATCCAACACCATCTCTTACGCAAATGCCAGCTTTGCCAAGAAGTCATCAGCATCTTATGAGTGGAACTCATCCTTCGGGAATGCTTCCTTCTTCTTTGCCCAGTTCAGGACCTGTCAAAATGGTCATCAAAAACGGAGTTCTTATgcccaaacaaaaacaaagacgcTACCGCACTGAACGTCCATTTGCCTGTGAACATTGCTCTGCACGGTTCACCCTGCGTTCTAACATGGAACGTCATATCAAACAACAGCATCCTCAATACTGGGCTCAACGACAACGCAGTGGCCATCATATAATGCGTGGTCGTGCCAACAGTTCTTCGATACACTCTCATTTACAATCAGCTCACTCCCCCTTAGAAACGCCACATCCAATTGGTCCTAGTGGCATGATGACAAATCCCTTGACTGCCATTTCAGATCAAGTAAAATATGCTATACTCGCCCAACAACTAAAAGCCCGCAAGGAGACAGATATTCTGCAACAGGCTTTATCGCAAGGATCCAGCAGTGTGCTCACGCCGAACCCCACATCCAGTATGAGCAGTATTCGCCAATCGCTCAGTGCATCATCAAATACCAACAATGGCAGCACTGAAGATGATGATCCAAAATTAGTGATcgacgaagacgacgacgaacaagaagaggaagaagaagaagatgacGAAGAAGAGGATTGTGAAGATCGGAAACCAGAAAACTTGACCAAATTTCAAGATATTCCAGACCAAACAACAAATGAAGCAGCAAAGAAAGTTGCCGAATCTATTCTCGAACAAGCAATGAAAGCTGGAAGCACTAAAATTGCATATTCTAACGATGAAGACCGTGATCGATCTGCCGGTAAAGACTTCGGACTCAAACTGTCGAAGAATATGATTGATCAAGCGGTGTCAGTTGGAAAATTTCTCAAAGAGGTCGCTAGCTCTCCATTTAAAGATGATTCAAACGATTTGGTATCAGTATCAAAGTTGGTTGATAACGCAACTAATTCTATGTCCTTTAATCCCTATTTTCGACCCAGTGACGTAGTCAATCAAATGGAACAAAGTGACGAGGAGGGACTTGTTGCATCGGGAAGTGCATCGGAAAGCAATAATTCTGGTCCAGAAGATATGGTTAGCTCGCAAGAGCCGAAGAAAAAATCAGCATACAGTTCAGCACCTAATCGTGTCTCCTGTCCATATTGCCAGCGAATGTTCCCATGGTCTAGTTCATTGCGCAGGCACATTCTCACTCATACCGGCCAAAAACCATTTAAATGCTCACATTGTCCGTTGCTCTTTACAACCAAAAGCAATTGCGATCGCCATCTGTTGCGCAAACATGGAAACGTTGAATCAGCTGTATCATTGTATGTTCCCATTGAggatgtcaatgagcctttgcCAGTGCCCAAATCTGTCGAAGAAATCGAACTACAACAGCAACAGCTTcttcttcaacaaaaaaaacaaaaacggttAGAAGAACTAaaggaaatggaaaaaattcagCCACCGATTCAAAAGCCATTAGAAGGAAATCAGGAGCAGACACCGAGTATAAATTCTACGTCCACAAACTCTATAAATGTCGCTTCTAAGCTTGAACCCATTCCGCCCTCTCCAATGATTTCATCCTCAGAGTTGCCATTCAAGTGTCATCTGTGTGACAGTTCGTTTGCGGAAAGATTCCAATGCCTTGATCACATTAAAATCCATCATGCTCAAGAATTTTCACTTCTTCTGTCGAAAGGCGCCATTGACAATGACGCCGATATTAACAGCCAAGTTCAGTCCACCGAAGATGATGAAAAACGCGACGAAAGCCGAGGAAAGTATCCAGACTATACCAACCGTAAGGTAATTTGCGCTTTCTGCATGCGGCGTTTCTGGTCCACCGAGGACTTGCGTCGTCACATGCGAACACATTCTGGCGAAAGGCCATTTCAATGCGATATATGCCTACGTAAATTCACCCTGAAGCATAGTATGCTGCGACATATGAAAAAGCATAGCGGTGGCAGCCATTCCAGCAACGGAGCCACCAATGCCGGCAACAGCGGTTCTGATGTCTccgacgatgaacaaccaccatCTAGTGTTATGCTTGCCAATGCCTTGCGTTCCCACAAAATCCAAGAGCTTTTCTCAAAAGTCAATAGTGAATGGCGTAATAATCGTATCTCGGGTGAGCACAAAGAGAACATCGAAGAGCACAATAACCAGTCTGATCTTATTGGCAATTTGCTGGGCATCAGCGATCCAGGCATTCTTAACAAACTGCTTTCATCGCCTGATGAAGCGGCCAAGTTTCTTGGCGTTGAAAAGTAA
Protein Sequence: MLKTSIKKELSDISLRKMDRRQSTTSDSSVEPMDLGRSNSKISTDMKDHSSTTLPTSTQIKDAILSDANNKYRYESDADESADDRDQQRRSHSQHHYHHRRRGNTAGRDKRTVLMECTDSPHSLRKKFRFSNSNHHNSMPDTVINLKTKTSNNDSTKSTTTAPANLTATTNNESGFVDASISHVLNTSGSSATSSTSSSSPTSSSSASPSASNVASAISSPESNMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGANGSNASLLPVQTLTDPSPATQTSAAVSVLPSKTATNIGNGAVCNSNGDTIGGGGDGCGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNNNISNFKRKSTDSLDDLAIMKRRVKTTINNNNIIDNTIHAIPEKSGIELPLPDAIENLKQQQQKLFCPVCNRDDFGGMLALGDHMDSDHSDIPAKCRHCDVVFRTHKQLNVHRCTSKFQITQGFKDLTFVDCPSEKFPLVAKSLCEQSTRVPIGGQKFECSKCYRAFSSASSVEIHEKDCTTSGLNLFVDSPNRKQRAYSESSANADDDDNRREEFFNRLYLTNKSTAQSMTSLSVSSPSLSDVKSSELDKTPAKNSQLEQFQDTKELADIQSILNITSSSSTCNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDELEKEHEPIIPEQEKEISRPIDLSMDALDLSKKSVKTEKIEEKRAQTPPLPPPVPRINPAHIQTDEPNILDMRLLEKNQQLLLAQQRLLNEAMPNMDPARFFQLSQLYNNLLFQPLNPFLLKNSFLSNNISDLNKFAPMVNPLYNGTPVESPISRAEKQNQQISLPKPVQDEVHSSTKQVNTQTQSPVPAQSQPLPRNPTPSLTQMPALPRSHQHLMSGTHPSGMLPSSLPSSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSIHSHLQSAHSPLETPHPIGPSGMMTNPLTAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLTPNPTSSMSSIRQSLSASSNTNNGSTEDDDPKLVIDEDDDEQEEEEEEDDEEEDCEDRKPENLTKFQDIPDQTTNEAAKKVAESILEQAMKAGSTKIAYSNDEDRDRSAGKDFGLKLSKNMIDQAVSVGKFLKEVASSPFKDDSNDLVSVSKLVDNATNSMSFNPYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVSSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQLLLQQKKQKRLEELKEMEKIQPPIQKPLEGNQEQTPSINSTSTNSINVASKLEPIPPSPMISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDNDADINSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGATNAGNSGSDVSDDEQPPSSVMLANALRSHKIQELFSKVNSEWRNNRISGEHKENIEEHNNQSDLIGNLLGISDPGILNKLLSSPDEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357374;
90% Identity: iTF_00335372;
80% Identity: -