Eeuc026472.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epistrophella euchroma
Gene Symbol
PZF1
Assembly
GCA_947049305.1
Location
CAMRIP010000299.1:441257-442612[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.00069 0.086 14.1 1.0 2 23 174 195 173 195 0.96
2 9 9.8e-06 0.0012 20.0 0.2 1 23 201 224 201 224 0.94
3 9 0.00054 0.067 14.5 0.1 1 23 232 257 232 257 0.94
4 9 4.9e-05 0.0061 17.7 0.4 1 23 266 288 266 288 0.95
5 9 4.6e-05 0.0057 17.9 3.6 1 23 295 317 295 317 0.98
6 9 0.0006 0.075 14.3 0.3 1 23 323 345 323 345 0.96
7 9 0.00012 0.015 16.5 0.2 1 23 351 374 351 374 0.97
8 9 0.075 9.3 7.7 0.8 1 23 380 402 380 402 0.94
9 9 7.8e-06 0.00097 20.3 1.8 1 23 408 430 408 430 0.97

Sequence Information

Coding Sequence
ATGGACATTCACTATAATGTTTTCGTAATACCAGATCTACAAAACAAATTGACTTCGTGTTCATTATTAGCTGTGGAACCAGGAGATGGCCTTCCAATAAGCTTATGTGAATTATGTCATACAAAgatcaatgatttttttatatttcaacaaATGTGCATATCCGCTAATAAACGTTTTAAGGACTATATAACTTTAGAGACAAAACCAAGTTCAATGGAATTCGCCGGCACTGATCCGAACAATCCGTTCGTCAATCTGATGATGTTTACGGatgcaaaaaaagaaactgaaGAAGATGATCCTATATCTCTAGATCAATATTCAGAACTTGTAAAGGAAGAGCCTTCAGTTAATCTGGAAGACAAAATTGAGTCCTCATCAAATGAGGAAGCAGAAGATATAAATGCTGAAGAAAATTCCAGTTGGGATATCAGTAGAATACAAGAGAACGAAGGGAACACCGATGACATGGTATGTCACAAGACGGCAAAACTTTCTTTGACTAAAATGAATTTAGAATGTGAAATATGCAAGAAATGCTTCAAGAATATCGAAATATTTGATGCACATATGCGCGTGCATCAAGGACTCAAGGCATTTCCCTGCCAGATGTGTGACAAATCATACGCACGTCTAAGTACACTTAAATTGCACATAATAGCTAATCACGAGGATAAACCTAAGGCAAAATTCCCCTGCACTGAACCGGATTGCGATAGAATAATGTCCACCAAACAAGCCCTCAAGCGACATATCAGGGATATACACTGGAGCAATGGCTATAAACAACCCTATATTTGTGAAGAATGTGGAAAAGTTTTGACAAGTTTATACATGCTTAAGAACCATCGCTTTCTACACACTGGCCAGCAACTACCTCACGAGTGTCCACAGTGCCAGAAAAGATACatgacaaaaaacaaacttcaagAACACATGAACCGACACGCCGGCATCAAAAACTACATCTGTCCACAGTGCGGTACTAAGAAAGTAACACAAAATGAactaaaaaaacacataaacgcccacactaaagaaaaaaagtatcCTTGTCCATTCTGTAATATGGTATTTTTTAGTGCGTCTAACATTAGCCAACACAAGCGGATCGTTCACGAAGGTATCAAGAGTTTTCCATGTTCGTTTTGTGAGAAGTCATTTGGCATAGCCAATACTAGAAAGTATCACGAAATGACTCATACAGGAGAGAAACCACACGAATGCAACATTTGTCGTAAGAAGTTCATCCAGCCTGTTGCCCTTAAGAAGCATAAAAAGGTTCATTTAAAACAACTGAGAAATCAAGCGAATGAAAAAAGGCATGAAGGGATTCTTGACTCGAATGAATGa
Protein Sequence
MDIHYNVFVIPDLQNKLTSCSLLAVEPGDGLPISLCELCHTKINDFFIFQQMCISANKRFKDYITLETKPSSMEFAGTDPNNPFVNLMMFTDAKKETEEDDPISLDQYSELVKEEPSVNLEDKIESSSNEEAEDINAEENSSWDISRIQENEGNTDDMVCHKTAKLSLTKMNLECEICKKCFKNIEIFDAHMRVHQGLKAFPCQMCDKSYARLSTLKLHIIANHEDKPKAKFPCTEPDCDRIMSTKQALKRHIRDIHWSNGYKQPYICEECGKVLTSLYMLKNHRFLHTGQQLPHECPQCQKRYMTKNKLQEHMNRHAGIKNYICPQCGTKKVTQNELKKHINAHTKEKKYPCPFCNMVFFSASNISQHKRIVHEGIKSFPCSFCEKSFGIANTRKYHEMTHTGEKPHECNICRKKFIQPVALKKHKKVHLKQLRNQANEKRHEGILDSNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00665096; iTF_00665118;
90% Identity
iTF_00665096; iTF_00665118;
80% Identity
-