Basic Information

Insect: Epistrophella euchroma
Gene Symbol: -
Assembly: GCA_947049305.1
Location: CAMRIP010000085.1:1004214-1006987[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.68 85 4.7 0.4 1 12 16 27 16 29 0.91

2 13 0.025 3 9.3 1.2 1 23 341 364 341 364 0.93

3 13 3.4 4.2e+02 2.5 3.8 1 23 373 395 373 395 0.97

4 13 0.00014 0.017 16.3 4.2 1 23 402 424 402 424 0.98

5 13 3.3e-06 0.00041 21.5 1.1 1 23 430 452 430 452 0.99

6 13 0.0001 0.013 16.7 1.5 1 23 459 481 459 481 0.98

7 13 0.00012 0.015 16.5 0.4 1 23 487 509 487 509 0.96

8 13 8e-05 0.0099 17.1 0.3 1 23 515 537 515 537 0.98

9 13 6.1e-05 0.0075 17.5 0.8 1 23 543 566 543 566 0.95

10 13 8.6e-05 0.011 17.0 2.9 1 23 572 595 572 595 0.96

11 13 1.6e-05 0.002 19.3 3.5 1 23 601 623 601 623 0.98

12 13 3.7e-05 0.0046 18.1 0.4 1 23 629 651 629 651 0.96

13 13 0.00096 0.12 13.7 0.9 1 22 657 678 657 681 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.68	85	4.7	0.4	1	12	16	27	16	29	0.91
2	13	0.025	3	9.3	1.2	1	23	341	364	341	364	0.93
3	13	3.4	4.2e+02	2.5	3.8	1	23	373	395	373	395	0.97
4	13	0.00014	0.017	16.3	4.2	1	23	402	424	402	424	0.98
5	13	3.3e-06	0.00041	21.5	1.1	1	23	430	452	430	452	0.99
6	13	0.0001	0.013	16.7	1.5	1	23	459	481	459	481	0.98
7	13	0.00012	0.015	16.5	0.4	1	23	487	509	487	509	0.96
8	13	8e-05	0.0099	17.1	0.3	1	23	515	537	515	537	0.98
9	13	6.1e-05	0.0075	17.5	0.8	1	23	543	566	543	566	0.95
10	13	8.6e-05	0.011	17.0	2.9	1	23	572	595	572	595	0.96
11	13	1.6e-05	0.002	19.3	3.5	1	23	601	623	601	623	0.98
12	13	3.7e-05	0.0046	18.1	0.4	1	23	629	651	629	651	0.96
13	13	0.00096	0.12	13.7	0.9	1	22	657	678	657	681	0.92

Sequence Information

Coding Sequence: ATGACTGAAATCATCGATCGAATAGCGCACTTTACAACAGAATTCTTCAAATGTTACCTTTGTAATAAAATCTTTGCTGATGGCGATGAGCCCTGGCATATGTTTGAAAAACGACTCGCAGAAAATGGTCAAAATGATGCTCCTTTAGCTACGATTTTATCATCAGCCCTGGGCAAGGATTTGGACGAGAATAGTGTACATTCAAAGtTAATTTGCGATGAATGCAACCTCATTCTACTGGAATATGAGCGAATCGAGAAAAGATTCTATCACTTTCGACTCAAAATTCTCACCGATTACAATCACACCGCCAAGGAGAATAATTTCGAACCAATTTGGTTTGAAATTGGAGACATCGATGATGGTGTTCAAATGATGCAGCTGCCGCAGGAGGAAAATCTCCAAGATGAAACTATTCAGCCTGTTGAAGAATTCGACCATGATATGAAGCCAGGAATAATTGATGGACTAATTGCTCACATTCCAATTATGGAAAATCAAGAAGTTTCTAATTTGGTGGTTGAAGAGAAAGAGGACCAATACGAAGTAGTCCAGTCGGATGATGTAATAGTTCAGGAATTGGATGCAGCGGAAACAATTTTGATTGGAAATACTGAACAAGAGTTCGAGAGCGTGGCGGCTGTACCGGCGGATTATGAGCAGAAGAATTTGCATATAATTGCTGAGGaaataccaTATGAGCaaataattgagcaaaattCTGTAATGAGCTATGAAAACAGCATCGATGATGTACATGAATCGGGCATTGATTACAATAGCAGCAATGATGATAACCATACAATAATCCCAGATGACATACCAATTatatcaaaacaacaaaaacgtaATAATCGCTCGATTAAACGTGAACAACAACAATCGACAGATCAACAACAACCGGGTATAGAATTCGAATTTAACGGAGTCGTATACTTCTGTACATTGTGCCCGGAGCGTTCTGAACACGTACCTATGCTATTTCCGATTCATTTGAAAACTGCTCACAATTATAAATTCTATGTTTGTGATATTTGCTACAAAGGATTCCATAAACGCAACGAAGTCAGTGATCACATGGACGAATTTCATGCCAGTGGAGCTGAGGAAGGTGAATTCCATTGTGATAATTGCATGCGGGTCTTTTTGAATCTTCGTCAATTCCGAATTCATAAGCGTCTGCATTATACATCGACAAAGCAACATGAGTGCTCGGAATGTCACAAGAAATACAGTTCGAAGAATCTGTTGGACGAGCACATGAACATGCATACGGGAAAGCGTCCGTTTAAGTGTGAATCGTGTAGTAAAGATTTCGCATCGAAATACACGCTGCAGGCTCATATGAAAATCCATACCAAGCGCCCAAGACCGTATAGTTGTGATAAGTGCGATAAGTCGTTTCTGAATCAACAAAATCTGGTGCAGCATACGAAACTCCATTCGGGACTGAAGTCGTTTATCTGTGAAGTGTGTCAGAAGGCCTTTGGAACGCAGCACAATCTAGATGTTCACAAGATCGTACATTCTGGCAACAAACCATTTATATGTCGAACATGTGGTAAGGGATTTGCCCGACGAGCCGAGATTAGGGATCATGAGAGAACGCACACCGGCGAGAGGCCGTTCAAGTGTGATCTGTGCACATTGGCCTTTGCCCAAAGATCAAACTTAATGACACACAAAAAGGCCACCCATTTGAATGACAAGAAACACAAGTGCGGATTGTGTGATAGGTCGTTTAAGCGACGAAGATTGCTGGAATATCATACACAATCAGCGCACACGGGAGAACGGCCACACAAATGCGAAGTGTGTAGTGCTACATTTGTCTACCCAGAGCATTTCAAAAAGCACATGAGAATCCACAGCGGTGTTAAGCCATATGCGTGTGAAGTATGCGGGAAGATGTTCAATAGCCGTGACAATCGCAATGCCCATCGATTCATCCACAGCGAGAAGAAACCCTACGAATGTCTGGAATGCGGAATGGGATTCATGCGGAAACCCTTGCTTCTGTCGCATATGAAACACACAAAGCATGTGAATGATACAATTATCGTGAATCAACCGCAGATAAGTCACAAAGGAGTGCTGGAAGTTTATAAAGAGACGACCGATGATGAGGAAGAAGATTTAGTGATAGAGAATCAGCAACAACTTGAGGTTGAAGAAGATGCAGAAGAAGATGAAGCCGGCTATGATGAAGTTGTGGCGTCAGATACAATTCTTGTAGAAGATGGCGATGGCCAGTATATTAAGGATGAAGATGGCGAAGTTAAATACTTGCAATTTGCCGAGATGGATAAGGATGGACAAGCGACGTTTACTTGGGTTGACATAGCCGAGGATAAAGAAGATGAAAATTAA
Protein Sequence: MTEIIDRIAHFTTEFFKCYLCNKIFADGDEPWHMFEKRLAENGQNDAPLATILSSALGKDLDENSVHSKLICDECNLILLEYERIEKRFYHFRLKILTDYNHTAKENNFEPIWFEIGDIDDGVQMMQLPQEENLQDETIQPVEEFDHDMKPGIIDGLIAHIPIMENQEVSNLVVEEKEDQYEVVQSDDVIVQELDAAETILIGNTEQEFESVAAVPADYEQKNLHIIAEEIPYEQIIEQNSVMSYENSIDDVHESGIDYNSSNDDNHTIIPDDIPIISKQQKRNNRSIKREQQQSTDQQQPGIEFEFNGVVYFCTLCPERSEHVPMLFPIHLKTAHNYKFYVCDICYKGFHKRNEVSDHMDEFHASGAEEGEFHCDNCMRVFLNLRQFRIHKRLHYTSTKQHECSECHKKYSSKNLLDEHMNMHTGKRPFKCESCSKDFASKYTLQAHMKIHTKRPRPYSCDKCDKSFLNQQNLVQHTKLHSGLKSFICEVCQKAFGTQHNLDVHKIVHSGNKPFICRTCGKGFARRAEIRDHERTHTGERPFKCDLCTLAFAQRSNLMTHKKATHLNDKKHKCGLCDRSFKRRRLLEYHTQSAHTGERPHKCEVCSATFVYPEHFKKHMRIHSGVKPYACEVCGKMFNSRDNRNAHRFIHSEKKPYECLECGMGFMRKPLLLSHMKHTKHVNDTIIVNQPQISHKGVLEVYKETTDDEEEDLVIENQQQLEVEEDAEEDEAGYDEVVASDTILVEDGDGQYIKDEDGEVKYLQFAEMDKDGQATFTWVDIAEDKEDEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00694891;
90% Identity: iTF_00664292;
80% Identity: -