Eeuc008766.1
Basic Information
- Insect
- Epistrophella euchroma
- Gene Symbol
- grau
- Assembly
- GCA_947049305.1
- Location
- CAMRIP010000066.1:829779-841046[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 3.1 3.8e+02 2.7 0.8 6 23 176 193 176 193 0.97 2 17 0.0099 1.2 10.5 0.7 1 23 199 222 199 222 0.92 3 17 0.00046 0.057 14.7 0.5 1 23 230 252 230 252 0.94 4 17 0.0011 0.14 13.5 0.3 1 23 260 283 260 283 0.96 5 17 1.4 1.7e+02 3.8 0.1 3 23 291 311 289 311 0.93 6 17 0.00038 0.047 15.0 0.6 2 23 320 342 319 342 0.97 7 17 0.047 5.8 8.4 0.1 1 17 349 365 349 366 0.93 8 17 0.12 15 7.1 0.1 2 23 524 546 523 546 0.94 9 17 2.9 3.6e+02 2.8 0.1 6 23 555 572 555 572 0.98 10 17 4.7e-05 0.0059 17.8 4.3 1 23 578 601 578 601 0.97 11 17 0.00072 0.09 14.1 2.0 1 23 609 631 609 631 0.94 12 17 1.2e-05 0.0015 19.7 0.2 1 23 639 662 639 662 0.96 13 17 2 2.5e+02 3.3 0.2 3 23 670 690 669 690 0.93 14 17 0.0045 0.56 11.6 0.5 2 23 699 721 698 721 0.96 15 17 1.8e-05 0.0022 19.1 0.1 1 23 728 751 728 751 0.97 16 17 4.5e-07 5.6e-05 24.2 3.8 1 23 757 779 757 779 0.99 17 17 0.0013 0.16 13.3 5.7 1 23 785 808 785 808 0.98
Sequence Information
- Coding Sequence
- ATGGTGTGTCGTTTGTGTTTAACTGATGCCAATGAAAGCATACATTTATACAGCgaggaaaaaattcaaaaatgtatagcaAAGTTCCTACAATTGGAGcTTTCATCagaagatcctatttctaaaaTAATATGTATTCCTTGTTGGCAGCAATTAGATAACTTTCAAAAGTTCTATCTTCAAATAGAAGAAGcacaaaaaactcttaaaaTAAACGAGGAAGTGTATGAACGTTGCATCAACAgtaatgaaaGAGATTCTAGCGATAACGATGATAACATACTGAATTGCATGGATGTAGATATTGTTAAAAGTGAATTGCAGAATGAACAAGAATATAAATCAGAGCTTGAAAAAACTAATTCCTCTGAATCAAATGAATCTATTCAAACGCGAAGGATTACTCGACACTCAACCCTGAACAAAactgttttcaataatttgtcAGATATAGAAGTTTCTGACTTTGCGGAATTAAAACATCATTTCCGACTTGTTCATAAACGCCGAGGATATGCGGTTTGTTGCAATAGACGACTTCATACTCGTAATCTGCTTGTGGACCATATTAATGTACACAACAATCCTGagcattttaaATGTACAGAgtgtgaaaaaattttatcagatagatTAGGCCTTCATAAACACGTAATAGCATTTCACCAAACCGAAGAACTAAAAACGTTTCAATGTGATTATTGCCCTAGGAAATTTGCTACACAAAATCTGCTGGATCTGCATAGTATTAATCATATTCCAAAGAATGAATGCACTTTCATTTGTAGCGAATGTGGAAATGGATTCCCAACAAACACAAGACTGAAATTGCATTTGAAACAAGTGCACTCAACATTGTATGACAAAATGTGTGAAATCTGTGCCAAACTTATTCGTGGTAAAGCagcttttaagcgccatgtagAAGAACATAAAGGCATTATTGATCCACAACTTCAATGCACACAATGTGGTGCCTGGTTTAAGGAAAATAGAAATCTAAGGAAGCACATTATGACACAACATTCAAATGATGATACAAATTATCCCTGCGATGTCTGCGGGAAAAAAGCTAAATCGAAAGCATCTCTTCAAGAATTGACCATACACTATCAAATTCTAGAAGATTCTAGCGATAACGATGATAACGTACTGAACTGCATGGATATAAATATTGTTAAAGTTGAATTGCAAAACGAACAAGAATATAAATCAGAACTTGAAAACACTAATTCCTCTGCAACAAATGAATCTATTCAAACGCGAAGGATTACTCGACGGTCAACCCTGAACAAAactgttttcaataatttgtcAGATATAGAAGGTAAACGAAAAACAGGTCAAGGGCTTGAAGTTGAAAAGTACGAAGTTAAAAAAACAGATGATAAAGATaaagaagagagagagaaaaataataatgactcaaatggaaagaaaaaaagtattcgACCCAggaaaagtaaaaaagttaatttgacggaaaaagcacaaaaatctgaaaaattctTAAAGGCTATGCAAACTTCTAAGGAATTCGATGAAATCATTCGGAAACATATGAAATTATCGTGCGATATTTGTTCGATTCAACTTTCTGACTTTGCGGAATTAAAACTTCATTTCCGACTTGTTCATAAACGCCGAGGATATGCGGTTTGTTGCAATAAACGACTTGACAAACGTGGTCTGTTTGTGGACCATATTAACGTACACAACAACCCAGagtattttaaGTGCACAGAGTGTGGAAAAAttttttcagatagaatttgcCTTCATAAACACGTTATAACGTTTCATCAAACCGAAGAACTAAAAACGTTTCAATGTGAGTATTGCTCTAAGAAATTTGCTAAACAATATCTGCTGGATCAGCATAGTGTTAAACATGTTCCAGAGGATGAATTCACGTTCATTTGTAGCGAATGTGGAAAGGGATACCCAACAAACACAACACTAAAAGCGCATTTGAAACAAGTGCATTCAACATTGTATGACAGAATGTGTGAAATCTGTGCCAAACTTATTCGCGGTAAAGCAGCTTTTAAGCGACATAAAGAAGAGCATGAAGGCATTATTCATCCACAACTTCAATGCACACAATGTGGTGCCTGGTTGAAGGATAAAAGAAATCTAAGGAAGCACGTCATGACACAACATTCAAATGATGATACAAATTATTCCTGTGATGTCTGCGGGAAAAAAGCACCATCGAAAGGTGCTCTTCAAAGTCACATGAGATATGTTCATCAATTATCGCGTATATTTAAATGCACATTTTGTGACAAATCATTTAAAAAGGCAGATCACCTAAAGgagcaCATGGCAACTCATACTGGAGAAGTACTTTACACATGCTCGTATTGCCCAACAACATTTAACTCAAGGTGTAACATGTATGCTCATAGGAAGAAGAAGCATCGTGAAGAATGGGAGGCAAATAGGGCGTTATCCAACAAAAGATCAAAATAG
- Protein Sequence
- MVCRLCLTDANESIHLYSEEKIQKCIAKFLQLELSSEDPISKIICIPCWQQLDNFQKFYLQIEEAQKTLKINEEVYERCINSNERDSSDNDDNILNCMDVDIVKSELQNEQEYKSELEKTNSSESNESIQTRRITRHSTLNKTVFNNLSDIEVSDFAELKHHFRLVHKRRGYAVCCNRRLHTRNLLVDHINVHNNPEHFKCTECEKILSDRLGLHKHVIAFHQTEELKTFQCDYCPRKFATQNLLDLHSINHIPKNECTFICSECGNGFPTNTRLKLHLKQVHSTLYDKMCEICAKLIRGKAAFKRHVEEHKGIIDPQLQCTQCGAWFKENRNLRKHIMTQHSNDDTNYPCDVCGKKAKSKASLQELTIHYQILEDSSDNDDNVLNCMDINIVKVELQNEQEYKSELENTNSSATNESIQTRRITRRSTLNKTVFNNLSDIEGKRKTGQGLEVEKYEVKKTDDKDKEEREKNNNDSNGKKKSIRPRKSKKVNLTEKAQKSEKFLKAMQTSKEFDEIIRKHMKLSCDICSIQLSDFAELKLHFRLVHKRRGYAVCCNKRLDKRGLFVDHINVHNNPEYFKCTECGKIFSDRICLHKHVITFHQTEELKTFQCEYCSKKFAKQYLLDQHSVKHVPEDEFTFICSECGKGYPTNTTLKAHLKQVHSTLYDRMCEICAKLIRGKAAFKRHKEEHEGIIHPQLQCTQCGAWLKDKRNLRKHVMTQHSNDDTNYSCDVCGKKAPSKGALQSHMRYVHQLSRIFKCTFCDKSFKKADHLKEHMATHTGEVLYTCSYCPTTFNSRCNMYAHRKKKHREEWEANRALSNKRSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -