Basic Information

Insect: Epistrophella euchroma
Gene Symbol: -
Assembly: GCA_947049305.1
Location: CAMRIP010000126.1:2223149-2224903[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 4.1 5.1e+02 2.3 0.0 8 20 122 134 121 136 0.86

2 13 0.0033 0.41 12.0 0.4 1 23 146 170 146 170 0.96

3 13 0.00036 0.045 15.0 1.4 2 23 174 195 174 195 0.98

4 13 6.9e-06 0.00086 20.4 0.1 2 23 230 251 230 251 0.97

5 13 0.015 1.9 9.9 7.0 2 23 257 278 256 278 0.96

6 13 1.6e-07 2e-05 25.6 0.7 1 23 284 306 284 306 0.98

7 13 1.3e-08 1.6e-06 29.0 2.5 1 23 312 334 312 334 0.99

8 13 1.8e-05 0.0023 19.1 2.3 1 23 340 362 340 362 0.99

9 13 0.00016 0.02 16.1 0.4 1 23 368 390 368 390 0.99

10 13 8.8e-08 1.1e-05 26.4 0.5 1 23 396 418 396 418 0.98

11 13 1.1e-05 0.0013 19.8 3.5 1 23 424 446 424 446 0.98

12 13 4.6e-06 0.00057 21.0 0.7 1 23 452 475 452 475 0.93

13 13 1.1 1.3e+02 4.1 0.1 2 23 553 574 552 574 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	4.1	5.1e+02	2.3	0.0	8	20	122	134	121	136	0.86
2	13	0.0033	0.41	12.0	0.4	1	23	146	170	146	170	0.96
3	13	0.00036	0.045	15.0	1.4	2	23	174	195	174	195	0.98
4	13	6.9e-06	0.00086	20.4	0.1	2	23	230	251	230	251	0.97
5	13	0.015	1.9	9.9	7.0	2	23	257	278	256	278	0.96
6	13	1.6e-07	2e-05	25.6	0.7	1	23	284	306	284	306	0.98
7	13	1.3e-08	1.6e-06	29.0	2.5	1	23	312	334	312	334	0.99
8	13	1.8e-05	0.0023	19.1	2.3	1	23	340	362	340	362	0.99
9	13	0.00016	0.02	16.1	0.4	1	23	368	390	368	390	0.99
10	13	8.8e-08	1.1e-05	26.4	0.5	1	23	396	418	396	418	0.98
11	13	1.1e-05	0.0013	19.8	3.5	1	23	424	446	424	446	0.98
12	13	4.6e-06	0.00057	21.0	0.7	1	23	452	475	452	475	0.93
13	13	1.1	1.3e+02	4.1	0.1	2	23	553	574	552	574	0.90

Sequence Information

Coding Sequence: ATGGCTAGTGAGTTAACACAAATCGAATCCTCAAATAATTTCGTCCTAGATGAAAACTGCACCCTTGCTGAGCCGCCTGACCAAAAGGATATGGAAAACGATAGTAACATCAATAAAGTCCTTATGACCAAGGACATGATAAAGCAAGAGCAAGGTTCATTAGATGACTTAAAAGACACGGATGAGAATCATAAAATATGTAAGAAAATCAAAGCCGATGACGAGGAGAGAAAAATCAATTGCGATGAGCATTTTTTAACCACCCTACAACAGTCACTAGATATGTTAGATCAAAAGAAATCCGAACCGAAAGAAGATCTCTCAAACGAACTGAACAAACGCCAAGTAGTGAAAACTCAACACACTGGATTCTCGAGGCAGGAACTACTGCAAGACCATGTAAGCATAGCCGTCGAGCTGGATGGAAAGGCTACATATACTTGCAAACTTTGTCCCGATAAAGTATTTACCCGACAATTGTCCATACGGAACCATATGATAAACATACATGAGAATCCTACGTGCCACGTCTGCCAAAAGACGTTCCTTCAGCGAGACGCGCTGATGGTTCACTTAAAAGTTCACAGcgacgaacaaaaaaacaaatgcgaCATTTGCAAGGCCTCATCCACACATTCCACTTCCCCGGCCTCGCACAAATGCATTCACACTGCCGATAAGTCTAACGTCTGTTCTGTCTGTAGCAAAGCGTTTCGGGAGGCTGGCCAGCTAACGGCTCACATGAAGATACATTTTGAGAGGTTTTTGCAATGTCCCAAATGCGACAAGAAGTTCAGCTGCAACAAGACCCTTCGCGCTCACTGCCGCACGCATAACGAAGAGCGTCCGTATGCGTGCTCGTTATGTGGAAAGATGTTTCGTTCAAATACGGATCTAAAGACTCATTTACGAGTGCACACAACTGAGAAGCCGTACAAATGCGAGATATGCTCCTACGCGTTCAAGCAGTCCAGCTACCTGCGGAGGCACATGCGAACCCACACCGGTGAGAGGCCCTACAAATGCTCTTATTGTGACAAGGGGTTCTCGGAAAGAAAGCGCCTGGTAACGCACACCCGAATGCATACGGGTGAACGTCCGTTCAAGTGCATGTATTGCGATGCAGCATATGCTCGGAATGATATCCTCCAGTATCACATGCGAACGCACACAGGTGAGCGGCCATTCGAATGTACTGATTGTGGAAAACGATTTAAGCAACGTGCAGCACTCATTAGTCACCAAAAGATTCACACCGACGAAAAGCCCTATCCTTGCCCCCATTGCCACATGAATTTCCGCCATAGCGGAACTTTGGCCACTCACATGTTGATACATACAAACGAGCTCCCATTTAAGTGTGACCTGTGCGAAAAGGGATTTAGACAAAGAGTAAACTTAAAGCGACATGTCGACAATGTACATGGGGGTGTTATTGATAAGGATGTGATCATCGACGACAACTGCACCTTCACCGATTCTCCAGAGGACAAGGATATCGATGAAGATAGTCACATCAATGGAGTTCTCAGGAACGAGGACATCATCAAGCAAGAGCAAGAGTCATTAGTTGATTTAAACAACCCGGACCATACAACACATTCGTTCCTCAATCAACCAAACCTCTATGACGAAGAGGAAAAACCCAACTGGCTAACGTGTCTGCTCTGTGATCAACGTTTTCTATCCACGAATGAACTATCAGTACATGCATTAGAGCACACTAAATCCGAGTTCAAAGAAGATATCTTATAG
Protein Sequence: MASELTQIESSNNFVLDENCTLAEPPDQKDMENDSNINKVLMTKDMIKQEQGSLDDLKDTDENHKICKKIKADDEERKINCDEHFLTTLQQSLDMLDQKKSEPKEDLSNELNKRQVVKTQHTGFSRQELLQDHVSIAVELDGKATYTCKLCPDKVFTRQLSIRNHMINIHENPTCHVCQKTFLQRDALMVHLKVHSDEQKNKCDICKASSTHSTSPASHKCIHTADKSNVCSVCSKAFREAGQLTAHMKIHFERFLQCPKCDKKFSCNKTLRAHCRTHNEERPYACSLCGKMFRSNTDLKTHLRVHTTEKPYKCEICSYAFKQSSYLRRHMRTHTGERPYKCSYCDKGFSERKRLVTHTRMHTGERPFKCMYCDAAYARNDILQYHMRTHTGERPFECTDCGKRFKQRAALISHQKIHTDEKPYPCPHCHMNFRHSGTLATHMLIHTNELPFKCDLCEKGFRQRVNLKRHVDNVHGGVIDKDVIIDDNCTFTDSPEDKDIDEDSHINGVLRNEDIIKQEQESLVDLNNPDHTTHSFLNQPNLYDEEEKPNWLTCLLCDQRFLSTNELSVHALEHTKSEFKEDIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -