Basic Information

Insect: Epistrophella euchroma
Gene Symbol: ECU03_0790
Assembly: GCA_947049305.1
Location: CAMRIP010000261.1:596050-599198[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0042 0.53 11.7 0.9 2 23 112 134 111 134 0.96

2 20 0.0014 0.17 13.2 0.4 1 23 140 162 140 162 0.98

3 20 4.5e-05 0.0056 17.9 1.1 2 23 171 192 170 192 0.98

4 20 0.0027 0.33 12.3 0.7 1 23 198 221 198 221 0.96

5 20 0.00032 0.04 15.2 3.3 1 23 253 275 253 275 0.95

6 20 1.4e-06 0.00018 22.6 1.1 1 23 281 303 281 303 0.98

7 20 2.5e-07 3.2e-05 25.0 1.8 1 23 309 332 309 332 0.98

8 20 0.1 12 7.3 2.0 3 23 344 365 342 365 0.95

9 20 3e-05 0.0037 18.4 2.0 5 23 461 479 458 479 0.94

10 20 9e-08 1.1e-05 26.4 1.6 1 23 485 507 485 507 0.98

11 20 0.08 9.9 7.7 2.2 1 23 518 542 518 542 0.96

12 20 0.0013 0.16 13.3 0.5 1 20 548 567 548 569 0.94

13 20 0.33 41 5.7 3.4 1 23 607 629 607 629 0.97

14 20 3.4e-06 0.00042 21.4 0.9 1 23 635 657 635 657 0.98

15 20 6.4e-05 0.008 17.4 2.0 1 23 663 685 663 685 0.96

16 20 3e-05 0.0038 18.4 2.3 1 23 691 713 691 713 0.97

17 20 4.5e-08 5.6e-06 27.3 2.3 1 23 817 839 817 839 0.98

18 20 0.0001 0.013 16.7 0.6 1 23 845 867 845 867 0.99

19 20 5e-05 0.0062 17.7 0.4 3 23 876 896 874 896 0.98

20 20 0.00014 0.017 16.3 4.8 1 23 902 924 902 925 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0042	0.53	11.7	0.9	2	23	112	134	111	134	0.96
2	20	0.0014	0.17	13.2	0.4	1	23	140	162	140	162	0.98
3	20	4.5e-05	0.0056	17.9	1.1	2	23	171	192	170	192	0.98
4	20	0.0027	0.33	12.3	0.7	1	23	198	221	198	221	0.96
5	20	0.00032	0.04	15.2	3.3	1	23	253	275	253	275	0.95
6	20	1.4e-06	0.00018	22.6	1.1	1	23	281	303	281	303	0.98
7	20	2.5e-07	3.2e-05	25.0	1.8	1	23	309	332	309	332	0.98
8	20	0.1	12	7.3	2.0	3	23	344	365	342	365	0.95
9	20	3e-05	0.0037	18.4	2.0	5	23	461	479	458	479	0.94
10	20	9e-08	1.1e-05	26.4	1.6	1	23	485	507	485	507	0.98
11	20	0.08	9.9	7.7	2.2	1	23	518	542	518	542	0.96
12	20	0.0013	0.16	13.3	0.5	1	20	548	567	548	569	0.94
13	20	0.33	41	5.7	3.4	1	23	607	629	607	629	0.97
14	20	3.4e-06	0.00042	21.4	0.9	1	23	635	657	635	657	0.98
15	20	6.4e-05	0.008	17.4	2.0	1	23	663	685	663	685	0.96
16	20	3e-05	0.0038	18.4	2.3	1	23	691	713	691	713	0.97
17	20	4.5e-08	5.6e-06	27.3	2.3	1	23	817	839	817	839	0.98
18	20	0.0001	0.013	16.7	0.6	1	23	845	867	845	867	0.99
19	20	5e-05	0.0062	17.7	0.4	3	23	876	896	874	896	0.98
20	20	0.00014	0.017	16.3	4.8	1	23	902	924	902	925	0.96

Sequence Information

Coding Sequence: ATGCAAAACAACACCGATTTGTTTACTCCCCTGCCAGTAGAGTTGTCCACTCCCAATGGACTCCTTTATCAATTCAACGAAGAGAAATTCCTTAAACATGATTTCTATACTTTTGAAATGGATTGCTTTACTGTGCCGGAGATTAACGACATTCCACCGCCTATTGTCGGTTTGAGTCCAATTCCAGAGGAAACATCATTGATGGTTCATCCCTTGGAACCTTTGTTTTCACCTGTAGAACCAGCGCCAGTTCCTTCAACTTCATCGGCTTCTAAGTTTGTTATACCAAACTCAGTTCAAGAAACACCACCAGAGGTTGCGGTTAAACAACTTTCATGTGATCTGTGCGAAGAGACTTTCTTCTCAACTCAAACTCTTCGTCTTCACAGGCGAGTTCAACACATCTCAACCAAAGAATTTCGCTGCCGGAAATGTCCGGCATCGTATAACTTTGAATCGAATCTTCTTCTACATTTGGCATCGCATGTTCCCAGTTGTAGTACAAATAACCAATGCCCTGAGTGTAAAATGGTTTTCAAACGCATTTCCAGTTTCAAGGGTCATTTGAAAACGCACCAGACTAGCGACAGATTCAAGTGTAATCGCTGTGAAAAAGAATTCGAACTTAAAGGCTACTATGAACAGCATTTGGCGAAGGCACACAAACCAGGCGCTGATGGTGAAATCGAAGAAATTCTATTGAAAGTGgcaaataataaaaaatgccgAAATACATCTAAGCAAGTCAATGGTAAATATCGCTGTCAATATTGTGAAAAGAAATTTGCGAAACCTTGTTTGTTAAAACGACATGAAGTTTCTCACACTGGAGCTAAACCATTTCAATGTACCCAGTGTGACCAAGGATTTACCCAAAAGTCTTCTCTAGACAGACATATGCTTTTGCACCAGGGTGTAAAAGATTTCAAATGTCCTATGTGCAGTTATagtttttctcAAAAGAACAATTTAATCACCCATATTAGACGAACTCACCCAATCAACGGTAACGTCGACAATATGTTTGGTTGTGAATTCTGTTCGTGTGTGTTTACAAAACTAAGTAGTGCCAATCGTCATCGAGCAATGATGCacccagaaaaagaaaattcaactgGTCAAGATGGGAATGACAATGAAGAAGACGATGATAATGTGAATGTTGCCAGAGTTATGGAACAGTTAAAAAGTTTTCAGGAATCTATGGGAATCATGGATATGCAACCACCTGCATTAGAACTTTCCCTAAGGGAACCTCCCTCACCTGGACCGATAGTCAAAACAGTAACCATTGTTGATACAATAAATCCAAAGAAAGAGAAGACGTTTAAACAAGCGAAAGAAATTATCTACAAAGGGCAACGAACAATCGCTTGCATTTATTGTGATAAGCAATTTAAGAGACCGTATGATCTTTTGAGacaCCATCGAACTCACACCAAAGAAAAGCCATTCCAATGTAATATTTGCACTAAAAGCTTCTCCACTAAAAGTGGTCTTAAAACTCATCTCAACATTCACTGCTCATCTAGAAAAAAGCCAGCTAAAGCTTATAAATGCGCTGTAGATGAGTGTCATAAGCGTTTTGCATCATTACGTTCATTGGATTTTCACACAAAGACTCATACAAATTCCATATCTTACATATGTCCCGTCTGTTCGAAAATCTTCACATCCAAAGCTGGTTTCTCTTCACACAGGCATAATACAAAAGATAACGAATTCGAAAGTATTCGCGAGCTTTTAAAGTCTCCCGTGCAAATTCAATCGAATATCGCCGAAGAAGCTTACAAAGCCGAAGAGTATTTGAAAAGAAACCACCAGTGTTTTGTGTGTGgcttgaaaatgcaaaaattgtCCCATCTTCGCCAGCATGAAGCCACACATAGAGGAGTGAAACCATTTGAATGTGAAATTTGTTTTAGGTCGTACACAACACAAAGTTCCCTCAATCTTCATCTGAAAATCCACACAGCTGAGAAAACTCACATATGCCAAGTGTGCAATGCGAAGTTCTTTACAAAATCCTTGCTAATGCGACACATGATATCACACAGTGATGAACGAAACTTTGCCTGTCCCTATTGTGATGAAAGATTCAAAACCAACGACAATTGCAAGAATCATATATTAACCCACGCCCGAAGTTTATTGGCAAGTCCGGATCCACCACCGCCGCCGCCACCGCCGCCGACAGATGAATATGCAGCCGATGTTAGTGAAATTCTAGATGAAGCCGCTATAAATTCTATGACACAGCAATTTATCGCAGTTGTTGAGAGTCCCGACAAGAATCTCTCGCCGAAGTTCCTTCAACTTGAATtagtcaaaaattgcaaaaagcaTAAGCACAAGAATTTGACTATCGAAACACTGACAACACCAAAGAAAATaaccacatccaaaaaatcCCTAGCACGATCGGTTAGACAGATCAATAAAACCGGACACAAGTGCAGTGAATGTGGAAAAGTTTTCTTCAAAGCAAGTGATTTGCAGCGTCACATTCGAACTCATACAAAAGAAAAGCCATATCAGTGCAGTGTGTGTTCGAGACAATTTGCAATAATGTCAACTCTGGTGAATCATATGAAAACACATGATTCGCAGAGAGAGACTTTTGGTTGTCAGGTGTGTGGCAAGAAGTATACTTCGCAGAAAGTTCTCACAGTGCATTTGAGAATTCATACAGGCGAGAGACCTTTTCAGTGTGGTGTGTGCAAGAAGACGTTTCGAACTTCAGGACATAAGATTTCACATATGAAGGCGCATCATAAAAAGAGAAAGTAA
Protein Sequence: MQNNTDLFTPLPVELSTPNGLLYQFNEEKFLKHDFYTFEMDCFTVPEINDIPPPIVGLSPIPEETSLMVHPLEPLFSPVEPAPVPSTSSASKFVIPNSVQETPPEVAVKQLSCDLCEETFFSTQTLRLHRRVQHISTKEFRCRKCPASYNFESNLLLHLASHVPSCSTNNQCPECKMVFKRISSFKGHLKTHQTSDRFKCNRCEKEFELKGYYEQHLAKAHKPGADGEIEEILLKVANNKKCRNTSKQVNGKYRCQYCEKKFAKPCLLKRHEVSHTGAKPFQCTQCDQGFTQKSSLDRHMLLHQGVKDFKCPMCSYSFSQKNNLITHIRRTHPINGNVDNMFGCEFCSCVFTKLSSANRHRAMMHPEKENSTGQDGNDNEEDDDNVNVARVMEQLKSFQESMGIMDMQPPALELSLREPPSPGPIVKTVTIVDTINPKKEKTFKQAKEIIYKGQRTIACIYCDKQFKRPYDLLRHHRTHTKEKPFQCNICTKSFSTKSGLKTHLNIHCSSRKKPAKAYKCAVDECHKRFASLRSLDFHTKTHTNSISYICPVCSKIFTSKAGFSSHRHNTKDNEFESIRELLKSPVQIQSNIAEEAYKAEEYLKRNHQCFVCGLKMQKLSHLRQHEATHRGVKPFECEICFRSYTTQSSLNLHLKIHTAEKTHICQVCNAKFFTKSLLMRHMISHSDERNFACPYCDERFKTNDNCKNHILTHARSLLASPDPPPPPPPPPTDEYAADVSEILDEAAINSMTQQFIAVVESPDKNLSPKFLQLELVKNCKKHKHKNLTIETLTTPKKITTSKKSLARSVRQINKTGHKCSECGKVFFKASDLQRHIRTHTKEKPYQCSVCSRQFAIMSTLVNHMKTHDSQRETFGCQVCGKKYTSQKVLTVHLRIHTGERPFQCGVCKKTFRTSGHKISHMKAHHKKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00664262;
90% Identity: -
80% Identity: -