Basic Information

Gene Symbol
bdp1
Assembly
GCA_947049305.1
Location
CAMRIP010000085.1:1432455-1434116[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2e-08 8e-05 23.5 0.0 3 44 445 486 443 487 0.95
2 2 2.7 5e+03 -1.5 0.0 23 38 528 543 520 548 0.66

Sequence Information

Coding Sequence
atGTCGACGCGACGACCTAGAATCAAGGCATCTGCCAACTTGGCTTTAGCTTCGAAACGTAAACCTAAAAACAACACTGATACGGTTTTAATTAAACCCAAAGAGGAGCCGTCTGATATCAAAGCTAAGTCTGCGGAAGTGAAATTAGAACAAAGTTTATCGGGCGACACTTTAGAACAAAAACTTACAGACAAGTGTCTAACTAAAACTCAAGAGAGTATAAATGTAAGTCAGTTCCATAAAACTCAAGAAATTGCTACTGAAAGTCAGCTTCTTGAAACAACAACTTTATCTGAAATTCCAATTAGTGCACAAACTACATCTCTCCAAGAAAATCGGACCATTGCGAACCAAGATGAACCCATACAAGCAAAACCATCTCCCTTAATTCTAGAGACCGTTACTCCAACTGAAACCAATCAATACTCATCTTCGACTCTAACTACAGATACTACACCAGAATTTTCGACTCTGGTAAGTCCAGATATTATCATCCATAACTCATCTGGGAAAACTTTACAAAGTTTTGAAGATGCCTTTAAATATCCATTTAATCCAGACTACAAACGGCCTTCGGCAATTATACCAGCTATGGAAGAAAATACTGCCTGTGACTTGGAAGACAATATTCTTCACATGGATTTGCAAAAGTCACCCGGCTTCCCGATGTCCCCGACCAAATCTCGACAAAGAATACGACCAACACCGATTTTTGGCCAGCGGCGTAATAGTTTCGTAGGAACCAGTCCCTCACCACATACAGAAGATGAGTCAACCGGAACAACACGCCAGAGAAGCTCAAACAGTACCTCATCAGATATATCGGGAAGTTTCCTAATGAGAAAACTGGCAGCCGGAAATCTAGGACGAATACGTACCGAATCAGGTTGTTCTACAATATCCGAGTCACGAGGATCTTCacgaaaaaattttaacgatGAACATAACAAATCATTAAAGAAAGAGTCTCAAATGCGTTTCAACGGTGGAGTTCTAGATAAAtcaacattgaaaatgtttgatCTCATTTACTACAATCCATCTACCAATCCTATGGAGAAGAGGCCAACTGGTGCGTCACAAGTTAGTGAAAAAACTTCAGAAGAAGTAACTGGATCAGAACCAAAGGGTGTAACTCTGACTGAATCTGCAATGCCAGTGCCACAATTGAAACTTGGTTCGAACGGAGAGCTTATGATTGATGAAATGAGTTTGGAAATTGAGACAACGGCTGAAGTGGAAGCAAGGAAAGTTTTGGCCAACACAAGCCTAATATATCACGACGAAAATACTGGTGGTGAGGGTTTCTACAAGAGAACCAAACGCACAAAAGACTGGCCACCTGATGagacaataaaattttatagatgTCTACAGACTGTGGGAACAGATTTCTCTTTGATGTTAACTCTATTTCCGAATCGTACGAGACGagatcttaaattaaaattcaagaaAGAAGAACGttgtaatttgaatttaattaacaaaGCTCTGCTGTATCCAGGAACATTTAATATTGAAGATTTGAAGGAGCAACTGGATGCTGAAGATAAAGAACGGCTGGAACAGGAACGACTATGGAAGGAAATCAAGGCAAAAGAGgcaaagaaaacgaaaaaggtaatttttagatttttttatataaaaaaaatgttttaa
Protein Sequence
MSTRRPRIKASANLALASKRKPKNNTDTVLIKPKEEPSDIKAKSAEVKLEQSLSGDTLEQKLTDKCLTKTQESINVSQFHKTQEIATESQLLETTTLSEIPISAQTTSLQENRTIANQDEPIQAKPSPLILETVTPTETNQYSSSTLTTDTTPEFSTLVSPDIIIHNSSGKTLQSFEDAFKYPFNPDYKRPSAIIPAMEENTACDLEDNILHMDLQKSPGFPMSPTKSRQRIRPTPIFGQRRNSFVGTSPSPHTEDESTGTTRQRSSNSTSSDISGSFLMRKLAAGNLGRIRTESGCSTISESRGSSRKNFNDEHNKSLKKESQMRFNGGVLDKSTLKMFDLIYYNPSTNPMEKRPTGASQVSEKTSEEVTGSEPKGVTLTESAMPVPQLKLGSNGELMIDEMSLEIETTAEVEARKVLANTSLIYHDENTGGEGFYKRTKRTKDWPPDETIKFYRCLQTVGTDFSLMLTLFPNRTRRDLKLKFKKEERCNLNLINKALLYPGTFNIEDLKEQLDAEDKERLEQERLWKEIKAKEAKKTKKVIFRFFYIKKMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00893828;
90% Identity
-
80% Identity
-