Basic Information

Gene Symbol
pol
Assembly
GCA_947049305.1
Location
CAMRIP010000044.1:2060014-2071820[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.5 9.4e+02 0.9 0.2 35 44 498 507 488 508 0.80
2 2 5.5e-13 1e-09 39.1 0.0 3 46 607 650 605 650 0.97

Sequence Information

Coding Sequence
ATGTTAGAATCTAAAGTAATTCAACATTCTACATCACCATACAATGCACCAATATGGGTGGTCCCGAAAAAGGAGGACAACACTGGAAATAAAGAATGGCGTATAGTAATAGACTAtagaaaacttaatttgaaaaccaaagaaGATAAATATCCTATCCCAAACATAGAATCGATACTTGATAAACTAGGTCACTCTAACTACTTTACTACTCTAGACCTAACTAAAGGGTTTCATCAAATAGAAGTAGAGGAAAATGATCGGGAAAAAACCGCATTTTCTACCCTTTCAGGACATTATGAATTCATTCGAATGCCCTTTGGCTTAAAAAACGCTCCGGCAACATTCCAACGCTTAATGAATGATGTTTTAAAAGACTATATTGGAAAGATATGTTATGTTTATCTAGATGATATAATTATATTCAGTACTTCTCTCGAAGAACATGTCCTTTCACTCAAGAAAATTTTAGGAGCTTTACAAAACGCAAATTTGAAGGTATCCCTAAATAAGTCTGAATTTATGAAAAAGGAAACTGAATTTCTAGGACACATAATAACGCCTGAAGGAGTTGATAGAAATCCTATAAAACTTCCATATGAGAAGACACCCACACCAACAGGACCAAGACAACATTACCACATTGATATATGGttcttaaataagaaaaagaaatacgtCACATGTATAGACAAATTTAGCAAATATGCCGCAGCAGAACCAATAAAACACAAGACTCACATAGATACTATACAAGCATTAACAAAGATATTCTCCTATATGGGAACACCGAATGTCATAACCCTCGACAATGAGAATGCTTTTGTTTCAGAATCTCTTAACAACTATTTAGCAAATAAAGACATACAAATACATTATTGTACAGCCAATCGACACACAGGTAATTCCGATGTTGAAAGACTACATGGAACTCTTAATGAACATTTACGTATTCTTGTATCAATCGAACAAACTGGCGAACAATTTGATCCAACTGATCATACAGATCAAGCCACCTCGTCTGGTTTACAAGATTCAAAGTTATGTAGTAGTAGTGTTGGTGCTGTTGGTGGTGCGCTTGGTGTTAGTAGTGGCAATGTAGTTGGCCTTGTTGGAGACAACAAGAATAGCAAACAATCAAACAACATAACTGCGACACCATCAAATAGTCCAACGGCAGTGGGTACAGCTATTGGCAATGTTGCTACGACTGCTTCTGCTGCTTCAAGTACCCAAAGGAGCCTTACTCCTACATCTACTACACCCACTGCATCCCCCTCTGCAAGCAAACGCcaacaaaatcaacaacaacagcagacTCCGAACATTAATCAAACAAATCCTTCAAATAATGAGGTCACTACAAGCAATCAAACCACTAATGCTGCTGCTAGTTGCTCGAATTCCTCATCTACAACCACAGCTGGAGGCTGTTGCTCAGGCTGTGGTGTAGCTTGTAATATGTTAAATGACACGCCACATGGAAAACTGTGCAACAGTTGCCATCATCACTGGAGACGAACGGGTAATAAAAGGCCAACTGCTGGTCCATACTTTGGCAAAAGATACCGTGACCGCAATGTTGATCGGCACAAGCGTAAACCACCGCGCGGCATGCACATTAACCACGATGACATTGTAGCGCTCGCTAGTTCAAACAATAATCAAGATCAGTTGCTAGCAAATACTGAAAGGGAAATTGTCTCATTACTAAGTCAAGTTCAactcaacaaacaaaatatatcttcaattaaacgaaaaaattcaGAGAGTTTGGAAGACTTACGCCCCCATGAATCTGCGAACCGTATAAATTCTCGTTGGACCAATGAAGAATTGTTACTTGCTGTCAACGGAGTACGGAAATATGGAAAGGATTATCAGACAATTGCTGATACACTTGGAACAAAAACCGACGCACATGTCCGCACTTTTTACGTCAACTATCGTCGTCGCTATAACTTGGACCAGGTATTAAAAGAGCACGAAGCTGAAAAAGAATTACAATTAcgagaagaacaaaaaaagaaagatctTCAAAATGCTGAGAAAACTATAAATAACGATGATACAAACTCAAATAAGTCACTTGACAATCAAAGCTCTACCCAAAAGGAGTCCGTTGTTACTGAGATCGACTTAGACAGTGAAACAGCAGATCAACCGCCGACTAAACGATTGGCAACTGGACTCCAGCAAGATTCAACTAAAGTGGCTTAA
Protein Sequence
MLESKVIQHSTSPYNAPIWVVPKKEDNTGNKEWRIVIDYRKLNLKTKEDKYPIPNIESILDKLGHSNYFTTLDLTKGFHQIEVEENDREKTAFSTLSGHYEFIRMPFGLKNAPATFQRLMNDVLKDYIGKICYVYLDDIIIFSTSLEEHVLSLKKILGALQNANLKVSLNKSEFMKKETEFLGHIITPEGVDRNPIKLPYEKTPTPTGPRQHYHIDIWFLNKKKKYVTCIDKFSKYAAAEPIKHKTHIDTIQALTKIFSYMGTPNVITLDNENAFVSESLNNYLANKDIQIHYCTANRHTGNSDVERLHGTLNEHLRILVSIEQTGEQFDPTDHTDQATSSGLQDSKLCSSSVGAVGGALGVSSGNVVGLVGDNKNSKQSNNITATPSNSPTAVGTAIGNVATTASAASSTQRSLTPTSTTPTASPSASKRQQNQQQQQTPNINQTNPSNNEVTTSNQTTNAAASCSNSSSTTTAGGCCSGCGVACNMLNDTPHGKLCNSCHHHWRRTGNKRPTAGPYFGKRYRDRNVDRHKRKPPRGMHINHDDIVALASSNNNQDQLLANTEREIVSLLSQVQLNKQNISSIKRKNSESLEDLRPHESANRINSRWTNEELLLAVNGVRKYGKDYQTIADTLGTKTDAHVRTFYVNYRRRYNLDQVLKEHEAEKELQLREEQKKKDLQNAEKTINNDDTNSNKSLDNQSSTQKESVVTEIDLDSETADQPPTKRLATGLQQDSTKVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-