Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_947049305.1
Location
CAMRIP010000152.1:450672-456918[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.45 8.5e+02 1.0 0.0 22 46 243 269 231 269 0.84
2 5 1.2e-11 2.3e-08 34.8 0.1 1 45 275 320 275 321 0.96
3 5 3.9e-14 7.3e-11 42.8 0.3 2 43 331 376 330 378 0.96
4 5 1.9e-08 3.5e-05 24.6 0.0 4 44 388 429 385 431 0.90
5 5 1.7e-13 3.3e-10 40.7 0.1 3 44 439 481 437 483 0.96

Sequence Information

Coding Sequence
atggaatcacaaaagaaaaaaccaaaGACTTCGGCTAAAAAACGTACTATCGAAAGTGAGACATCTGAAAGTGATTACAGCTTATCCGAGGATGAGGATGAGGACGAGGACGAGGACGATGATCAAGAAACCACCGAAGACGAGAGTGATGTTATTAGCTCCGACAGTGACGAAGAATACAACTCGGATGAATTGGATTTAAGTTGCATGGCTGATGTTGTTAAAGTATTGGAAGATCATGCTGATGCTAATATGGATAATTCGATTGTCCTTAATCGAAAGCTACAAGACACATTGGAAGAATtgagaacaaaaattgtttcaatgatCAACAAGTGTCGCACAATTTACGAGGAGAATCAACTGAAGCTAGCCAATCCCTTGAGTTTAACCTCCAATTTAAAAGGAATTGGGAGTTGTGGAAGACCGTTTTTTAAGGACAAATCTGGAAGATTTTGCCCGCCAAATGCCGATTACATATATCGTAGTGAGGTCGAAAAGGAATTCTTTCCTAGCGACTTAGAACTTTATCCACATTTTACTTGGACAGTCAGAGATAAAGTCGGAATTCTACAAGGAATCAAAGAACAGGCTATTGAATATATAGAACGCAAggattcttacaaaaaaaaacttcccaaaTCTACACCTTtaagtaaaaaagtaaaactgcACTCACTCAAACTCAACAAATTGTTAGATAAAGTCGATAGTGAATTTGAAATCGACTGGAATCAGATATCAGTATACAACCTAGGTTCTCGTCATACGGCCAACAGTTGCTTGGCCAGTTGGAATGCTTATCTAAAGCCAGATATAAAACGTGACGAATGGACAAACGAAGAAAATACTAAACTAAATGAACTTGCAAAGAAGTATCAGTTTCAGGATTGGATTGGAATAGCTTCAGAAATGCCAGGCAGATCAGACTATCAGTGCTTTGTTCATTATCAAACTGTGGTTTCAATACAAATGCGAGAGGATAAAGGTGAACGCTGGACAAAAGAAGAAGATGATTTGTTATTGTCGCTGGTCGAAAAATATCGAATGGGCAATGTGATAAGATGGAATCCGATATGTTCGCAGTTTCCGAATCGTACAAAAAGACAGTGTTTTGCTCGTTGGAAATATAGTATTAACCCCAACATTTCAAGAGctttattcACTCCTCAAGATGATTGCATTATTTTAGCCGCTGTCGAAGAGTTTGGCGAAAACTTTAATTGTTTCCCCAAAGATCTTTTTCCAAACCGAACAGTCGTCCAAATCCGAAACAGATACAACAACTCGATAAAACTTCGAGAAACAACCCGGCATTGGTTACCAGAAGATGATCGATTGCTTCTAAATCTCGTAGCGAAATACGGCGAGCACGATTGGAAAACTATAGCCGCCTCATTAACAAGTCACACTCGAAACGGTTGTCGCACCCGTTTTAACACTATtgcaaattttttcaaagaaaatcccGATGCAACTATTGAAGATATTCctcgaaaaaaacgaaaaccacGATCGaatgtaacaaaaaataattgggtAAAAACAATTACTGGTTTTGGAGAAGAAATCGAAACCGAAGAACCCGTCGAACAAAAAGTAGAGCTATACCGCTCTAAACTGCGCAAGAACGAAATACagtggtataattttttgaaatactcaTATGATTTCAAATTCGGCGAGGGCTATAGCAAGGTACCTAAATGCTTGTCGAGTTTGGAATTCGTTCGGTATGTTTTCGAATGCAAACTGAATATGCCAGTCGTTCTCCGGGGAGGTTATTCGAAAGGATTTGTTGCCGTGAGTTTGACGAAACTTATACGACTTCATGAACAAGATGAGAAAACATTGGTGTTCGAGAGACCTGATCTGGGTTATAAACTGCCACCAAGTTATAGCTCTCTACTGGCTTTTCGAGGACTCTGCATACAGGCTTCTTTCAATAATAACCAGGATAAAGTTGATAAAAGTACAAATCAACTGCCTGCCAATGTGATTGAAGCGAGAAATAAATTTCGTCAGCGACTTATTAGTCTGCTTTATAAAACAACTCTTCTAAGCCGACTAGAGCCCAAGACGTCCGTAGAGCATAATACATTCGAGGTGATTTTCGATGCAAGCACTCAACTGGGACAAGTCGCTAGCATAAATTTGGCCGAACTCAAAGTTGCTCAGATGAATAAAATTGCTGAAAATCTTCGAATTGCTCAAGAAAAAGCCGACAATAACCGAAGGTATAAACAaaggttaaaaaagaaaatgaagaaaTCTACGGGCATTGAACCAAAGCCTAATGAGAATGTTTGGAAAGTTAAAAGCAAAGACATCACAGATGAAGTTATTGAAGAACAAAAACGAAAGCaaccaaaacaacaaaaaaatatcaaaagtgtTCGTAAGAAGACAATTACTATGTCTGAACTCTTAAATATCGTCAACCGGTCATCAAAAGAACAAGAACGGGAAAATGAGGCGAAATCAATCAATGTGAGCAGTTCTTGTCCATCGAAATCATTCGAACAGCCTAAAAAGACTTTAAATGAAGTAGAAAATGATGCCGAACTAGAACAACCTAACAATTTGTTAACGGAATTAGGATCACCTCAAGCGAGCACAGAAGAATCAGTTATTAATGAAAAACTACCAGTCATTGATTCAATTACGGAGACGAAGCAATTTCCCCCCAAGTATAAATCTTTTGCTACACAAAAAGCAAATCGAAAACGAAAATTCGAGGAGGGTTTAATAATTTTAGAAGAATCTTCTGACTTGCCAACATTTGAATCAAATTGTGcggtaaataaaattaaacgcgaaaaagaataa
Protein Sequence
MESQKKKPKTSAKKRTIESETSESDYSLSEDEDEDEDEDDDQETTEDESDVISSDSDEEYNSDELDLSCMADVVKVLEDHADANMDNSIVLNRKLQDTLEELRTKIVSMINKCRTIYEENQLKLANPLSLTSNLKGIGSCGRPFFKDKSGRFCPPNADYIYRSEVEKEFFPSDLELYPHFTWTVRDKVGILQGIKEQAIEYIERKDSYKKKLPKSTPLSKKVKLHSLKLNKLLDKVDSEFEIDWNQISVYNLGSRHTANSCLASWNAYLKPDIKRDEWTNEENTKLNELAKKYQFQDWIGIASEMPGRSDYQCFVHYQTVVSIQMREDKGERWTKEEDDLLLSLVEKYRMGNVIRWNPICSQFPNRTKRQCFARWKYSINPNISRALFTPQDDCIILAAVEEFGENFNCFPKDLFPNRTVVQIRNRYNNSIKLRETTRHWLPEDDRLLLNLVAKYGEHDWKTIAASLTSHTRNGCRTRFNTIANFFKENPDATIEDIPRKKRKPRSNVTKNNWVKTITGFGEEIETEEPVEQKVELYRSKLRKNEIQWYNFLKYSYDFKFGEGYSKVPKCLSSLEFVRYVFECKLNMPVVLRGGYSKGFVAVSLTKLIRLHEQDEKTLVFERPDLGYKLPPSYSSLLAFRGLCIQASFNNNQDKVDKSTNQLPANVIEARNKFRQRLISLLYKTTLLSRLEPKTSVEHNTFEVIFDASTQLGQVASINLAELKVAQMNKIAENLRIAQEKADNNRRYKQRLKKKMKKSTGIEPKPNENVWKVKSKDITDEVIEEQKRKQPKQQKNIKSVRKKTITMSELLNIVNRSSKEQERENEAKSINVSSSCPSKSFEQPKKTLNEVENDAELEQPNNLLTELGSPQASTEESVINEKLPVIDSITETKQFPPKYKSFATQKANRKRKFEEGLIILEESSDLPTFESNCAVNKIKREKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00664781;
90% Identity
iTF_00664781;
80% Identity
-