Basic Information

Gene Symbol
ct
Assembly
GCA_947049305.1
Location
CAMRIP010000008.1:936888-940052[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-32 3.9e-28 98.1 0.0 3 77 336 411 334 413 0.96
2 2 1.6e-31 5.3e-27 94.5 0.0 3 77 554 629 552 631 0.96

Sequence Information

Coding Sequence
ATGTCGGATGATCGTATTGCACACATTCTAAATGAAGCTTCCAGCCTTTTGAAGACCCCTCAGGGACAAGGTTCACAGTTGCAGCAACAAATGAAACATGAATCTCAGCGTCTTCATCAGCAACAAACATCATCACTCGATGATGAACAGAGCAATGACGAATCAAAATCACCGCATGCATCTTGTACGTCACCATTCTATAAAGATTCCCCAgtgcaacaacagcaacaacagcagcagcagcagcagcaacaacaacagcagcaacaacaacaacaacagcagcagctaCAACAACGTCAAGAAGCCCAGCGTCGAAATTCGAAGCCCGATGAAATTTCACAAGACAAGATGGCGAGAATATACCAAGAAGAGCTGCAAAAGCTCATGACTCGCACTCCACGCGACACATTTCCAAGTGCGGCTGGTGGCCTTCCACCCGCCAATAGTGCGATGCCCCCTGACGATATTCGAATGGCCTTGGAAGCCTACCACCGTGAGATGGCCAAGTTGCAGCAGAACAACAGTGGCAATATACCCAATTTTCCGAATTTTTCCAGCTTGATGGCTCTGCAACAACAAGTATTGAACGGAGCACAGGATCTATCCGTCCCGAAGGAAAGTGAAATCAAAATTAACGGCCAACGACATTCTATGGAAAGCTGCGACTCTTCCTCTAATCAAACCAAAGAAGCAGCTGAAGAAGCCGCGCATCGTCATTCAAGTGCATTTAGCTTAGTTCGCCTTAAACCAGATCCTGTGCCTACAGCTAATTCCAATACAAATACCAATTCAGCTGCTCCTAGTCCACTTAGCAATTCCATACTTCCACCGGCTATGGCTACATCTGAAGATTTCTCCGCAGCAGCCAGCCCGCTTCAGAGGATGGCTTCAATTACAAACTCATTGATTACACAGCCTCCAGTAACGCCTCACCATACGCAGCCACAAAGACCCACCAAAGCGGTATTACCACCAATCACTCAGCAGCAGTTCGACATGTTCAACAATTTGAACACCGAAGATATCGTCCGTCGAGTGAAGGAAGCTCTATCGCAGTACTCCATAAGTCAGAGATTATTTGGGGAATCAGTTCTAGGGTTATCACAAGGATCGGTTTCCGATCTTCTTGCTCGACCAAAGCCCTGGCATATGCTTACGCAAAAAGGCCGTGAACCCTTTATTCGGATGAAAATGTTCTTGGAAGATGAAAACGCCGTGCACAAATTGGTAGCCAGCCAATACAAGATAGCACCCGAGAAGTTAATGCGGACTGGTAGTTACAGTGGTAGTCCACAAATACCACAGGGACTTGCGAACAAAATGAACAGTATTCCCATGCAGAAAATGATGAACGACCTGAAAATGGAGCCTCAAGCACAACACATAATGCAGCAAATGCAAGCAGCTTCAGCAATGGCTGCGGCCGCTGCCGCAGGTCACATACAAAACGCTCAACATCAGGGAATGTTGCTAACTACTCCGGGACTCCCGCCTCAACACGCAATAAGCCTGCAGCAAGCCGCTGCTAACGCAGCTGCTGCCAATGAAAAGAAGCCCATGATGATGCCAATTCACTCACCGCACCAAGCCAACGCTATGCGAAGCAGCATGCACCAACACATGTCACCAACAGTTTACGAAATGGCAGCTCTTACTCAAGACCTGGATACACAGGTTATAaccacaaaaattaaagaagccCTGCTTGCAAATAATATCGGCCAGAAGATTTTTGGCGAAGCGGTTTTAGGATTGTCTCAAGGTTCAGTTTCAGAGCTGCTCTCAAAACCAAAGCCATGGCACATGTTGAGTATCAAAGGTCGGGAGCCTTTCATCCGTATGCAATTGTGGCTCTCGGATGCTAACAATGTTGAACGTTTGCAGGTACTTAAGAACGAACGTCGCGAAGCTAGCAAACGCCGTCGATCTACGGGTCCCAATCAGCAAGATAACAGCTCCGACACAAGTAGTAATGACACTGCTGACTTCTACACCAGCAGCCCTGGCCCCGGTTCAGTTGGTTCAGTTGGAGCACCACCAAACAAAAAACAGCGTGTTCTCTTCTCTGAGGAACAAAAAGAGGCACTTCGCCTGGCCTTTGCTCTAGACCCGTATCCAAATGTGGGAACCATTGAATTTCTAGCCAACGAATTGGGTCTGGCAACGCGAACCATCACAAACTGGTTCCATAATCACCGAATGCGCCTCAAACAGCAGGTGCCACACGGTCAGCCCTCAGAGCCGGTCCCAAGTCGAGAGAATACCAACGCAACACCTTTCGATCCAGTCCAATTTCGTATACTCCTCAATCAAAGACTGATGGAATTGCAAAAAGAGCGTATGGGTCTCAGTGGCGCCCCCATACCCTACCCACCGTACTTTGCAGCCAATCCAAATTTGGCGGCACTAATAAGCCGTGGTTTGCTTCCCGGTGGAACAGAACCCGATCTGCAAGCTCTAAACAACGCCTTCAAGGAACAAATGAGTGGTCTTGACCTTTCTCTTAAACGAGAACGAGACGGAGACTACGATGACGATGGCGAAGATGAGTCTCATCTTTCTGACAATGAATCCATTAATGAAAGTGACGAAAAGTCAGAGATGAGTGAAACACCGAGGTCTTCACTGTATGGCACCATGGGCCAGTCTCGGACTTCGAGACGGAAGCCCGCTGCCCCCCAGTGGGTAAATCCTGACTGGCAGGGTGATGGTAAAACAGGATTAATGCCTCCGACCGTACCTGGAGGTGCCACCGACAAGGAAGTCATCATAAACGGTGTTTGTGTAATGCAACAACAAGCTTCTGACTACAGCCGAAAATCAGGCAATGGCGAAGACGACGAAGAATGCGCCTCCGATGCCAACGATGAAGAACAAACTACCCATCATCGCAGTCAGCCTTCTGACTGCGAGGACGCTCCCGCTGATATCGACCAAAGGTTCATGGAACCCGAAGTTCGAATTAAACAAGAAGAAGACTGTGACAGCAACGATAGCCATCAAGATAACTTGGACATAAGAAAACAACAACACCACCACCGGGACGAAGAAGACGACACCCCTGGTGCAtggaattattaa
Protein Sequence
MSDDRIAHILNEASSLLKTPQGQGSQLQQQMKHESQRLHQQQTSSLDDEQSNDESKSPHASCTSPFYKDSPVQQQQQQQQQQQQQQQQQQQQQQQQLQQRQEAQRRNSKPDEISQDKMARIYQEELQKLMTRTPRDTFPSAAGGLPPANSAMPPDDIRMALEAYHREMAKLQQNNSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKESEIKINGQRHSMESCDSSSNQTKEAAEEAAHRHSSAFSLVRLKPDPVPTANSNTNTNSAAPSPLSNSILPPAMATSEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHIMQQMQAASAMAAAAAAGHIQNAQHQGMLLTTPGLPPQHAISLQQAAANAAAANEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALISRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSEMSETPRSSLYGTMGQSRTSRRKPAAPQWVNPDWQGDGKTGLMPPTVPGGATDKEVIINGVCVMQQQASDYSRKSGNGEDDEECASDANDEEQTTHHRSQPSDCEDAPADIDQRFMEPEVRIKQEEDCDSNDSHQDNLDIRKQQHHHRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00241365;
90% Identity
iTF_01318014;
80% Identity
iTF_00664737;