Basic Information

Gene Symbol
Arid2
Assembly
GCA_947049305.1
Location
CAMRIP010000205.1:1416911-1431118[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-24 4.2e-21 75.9 0.0 3 89 43 127 41 127 0.95

Sequence Information

Coding Sequence
atgtccaCAACCGAACTAATCCAATCGGCTTTTCCACTGCCCGCTCAAAGCGAAGATAGTGTTTCCAATTGCAAAAATGTAGGTCTTAAAAGAACCTCACGTACCGAATCCGCCGAACAAGATCGTGGAACTTTTTTTCGCGCTTTACAAAGTTTCAATGAATCTCGAAACACTCCGATAACTCGCCTCCCTAAGATAAATGGCCAAGAAGTTGACCTATTTGTGCTGTACAACGAGGTCACTGACCGTGGCGGCTGGTTGAAGGTCAACATTCGCAATGAATGGAATGAGTTGGTTGAGAGTCTGGGCTTCCAGCAGACGTGTGTTAATGCTGCTGTAGCGATAAAGTCTATATACACACGTTATTTGGACAAATACGAGCGATTGCATTTCCTCGGTGAGGATCCAGACAAAACAGATGACTTGGACGACGACGGACGTCCAAAGAAATGGGCATCCAAGACGTACAATTCAATTCCTATGACCTACAACTACAAACAACATGAAATGAATGAAGAACAAAGGAATGCGAATCGGATGTCCGAGGACCTGTATAAAGAATCGGAGTACGATAGGTTGCTACTTTCGTTGATATCCCCACTTCCCAATGAACAAGACTTTGCCATCAACGTATGTACGCTAATGTCCAATGAAAGTAAACATACCCTGAAACTAGATCACTGTCCAAAACTCCTTGACGCTTTGCTGGCACATGCTGGGGTTTTTTGTCACTaTTCTATGCGTGAACTATTTCAAGAGCTATATACAAATGTGAGAAAGCATTCGCTGCAATCTTTCTGGAAGGATCTGCTTTACGACAAGCCACAAATCTTGGAACTTTCTTTTGACGACTTCTTAACAGGAAAGGACATAGAAAATGCTGACTTAGAAGGCCcaacaattgaaaaaatctttcaagACGGCTTAAATGCCGATTCAGAGGATGTTTATATGCGTTCTCTGGATTTTCTTTCGTTGGGACCAGGATTAGGCACTCAGGAATACATCGGCCAGCGTATTCATCAAGTTTCTTCGATCATAAGAAATCTTAGTTTTTACGAGGAAAACACATGTGTACTGGCAAAAAATCGAACATTCGTGAGGTTCTTGGTGATGGGTGCTAACATTCGTTGGGGCAATCTCCATCATATGGTATTGGATATGTTTGGAAATATCGCTATGGAATTAGATTTACTAGATCCAACACTTGATGAATTAACACGTTGCTTGATGTCGACGATTTGCGAGGGAATAGAAAGTTCAGATCGTGGTGTTATCATAAGTTGTCTAGAAGTCTTGTATAAGATCTGCCAGCAGGATAGCAATGAGGAACCCATCCACAAGTGTCTCgatcaaaaattttacaatacgTTATGTCTGTATTTATCGTTGAATGATataatgttgttgttgtacACCCTAGAGGCTATCTACGCGCTTAGTTCGTTGGGACATCGATCGTGTAATTCACTGGTACAGGTCAAAGGAGTCATCAATTCACTTGTGTCGCTGATCACAGTTGAGgcTCAATCATATGGTCCCGATGGATGTATTCTTATGCGAGTTGTCGAAACAGTTCCAGGAAATATGTTGCCAATGGTTGCCCAAAATATTGCAAACATTGCAAATTTACAAAACGCAATACAAACAACGCAGCCGCCGTCACAACAACCTGAAACAACTTCACTCGGCCGAGCTTCTCCTGCACCAAATCGACCAATTCAAGAAGCAACTCCGGCACATAGGACAAAATCTCCAGTACCCACAAACCAAGATCATGAAAACTTCGCATTGTCTTGGCTAAGTGCTACCTTTGAGCCAACACCTTCACCTGATAGTCGCGTTGAGCAACAGGAACTTTATCGCATGTATTTGTCGGCAATTCAAAAATGTGGTCGGCGAGGAATTGTATCACATACACAATTTCCGCGAATGGTTCGAACGATTTTTGGAGCTCAAGTTGTcccaaattataataaaaaagtggaaaatcccGAGGGCTCTAAGATCTATTATGTTTGTATTCGGGTTCGTGCAAATCCTTTGCCAATTCAAATTAAAGTCTCTTCACAAAAAGGTTTGAAAGATGGAAAACAAAAGCTCGAACCCGGGTCAATTAAGAAGACAAAGAAAAGAATTCGATTACATGAACAATTACGACAAGAAAAGTTACAGAAACATGCTGTTTCACCTACACCCATGAGCCCAGTAAGCATTCAGAAGCAACAGCAAACCATTAATACTCCAGTTAATCAACAATTTGTGAAAATCGAAACGATTGTGCAACAACCCTCTCAGCAAACTCAAGTTGGTCCCCAAGCTATGGTTAAAGTCGAACCGCAAGTAGTTACTACTCCTTTAAATCAGCCACCAATTACACCAATCTCAAAAATTgtaAACTCTAACCAGCAACAAGTAATAGGAAATGTTGTCTTAACTCCAACTACTCAAACAACAATTGTTCAACAGTCTGCCAAACCAATTCAAATTACAACTATTGCTGAACAACCACAAGTCGCCCTTCAACATCAGATTCAATTACCAATTTCATCTCAGGCACAGACGCAAACGCAGCCACAAATGCAaccaaagcaacaacaacaacaacaacaacaacatattgcTAACAGCAATTCAACTACTTCGACATCAACAACTACATCAAATGGTGGTAATGGTGGTGCACAACCATCTTCGTCATTAGTTAAAAGCCTATTGGCAAATAAGGTTGCTCAACGTCAGCAAAAACAAAAGGAGCTCGCCgcccaacaacagcaacaacaacaaagttCACCAATGAAAATGCCCACCACATCACTTAGTGCAGTAGTAAATAATCCGATGATGCACACAACGCCAATCAAAGTAGGCCAAACGACAATCAAGCCTTTGAACAACAATGGAAAcgataagaaaacaaataccaTAAGTAGTGAAAATTCGGACAATTCTAACTGGGATCCAATTCCACCCTTGGCTCCTCTTAGCTCTGGTACATTGATCCGTTCAAACGTTATTatccagcagcagcagcagcagcaggttCTATCGGCAAATGATGATTCGAGTTCAGCTTCGATTGCTTCGAGCGTTTTAAGTTCATCTCAAATGGAAGGCGATGGGTCATTTGCCAGCTTTGAAGGTTTGCTTATGTCaaagtcaaataaaaatgttagtaCATTTGGCATTGATGACGACAGCTCAAAGGATTCTCTGAGTCGAGGTTCTAGAGACAGTGTGCGGATGATGGGTGCCAATCAGATGCTTGTGGATTTGTTGGACAAAAAAACCTTGGATCCACCTATAAGTGGAAAACGTAAACATGAAGATGATTTTGATGAATCGGAAGAAAAGAAAATGCTTATGGATGCTGAGCCAACGGTTACTGCTTCGAAGAATGCAGCTAATCTCTACGCCGAGATGGCTGCATCTATTCTCGAAGATGAAGATTTAGAAGAAGAACCACCAGTGCCGCAACAGACATCAGTTATTCAGCAAACAAAATTGGcgattcaacaacaacaacaacagcacgAGCCACAGAATCAGATAATTTCAATGCCGGTAAATATGCCGCGCCAACTTATAATGAATCCCAATAATCCTCACCAGATGATTCTGTCACAAGGTCCGCAGCAATCAAACCTGCCCACCGCTACGGCGACAATTAAAACTGACCAGGGTCTACAGACTGTTCCgtgcattttacaaaaaaacgcAATGGGTCAACAGATCCTGCAGCCAGTCATGCCACAACAGCAACAGCCGCAGCCGCAAACACAGTATGTACTCGCAACTAATCCTCAAGGACAGACATACCTTGTGGCTCAGCAAACAACTCAGCCTCAGCAACAGACTCAGCGCTTGTTAGTCACTCAAACGCCACAACAACAAGCCGCCGGTACGAAGACCATTATCATTCTTCAGCAACAAGGACAACCTGTTGGCCAACAGCAGATGATAACTACATCTCAGCCTCAAAAGGTAATCATGACAACCTCACAGGGTCAGCAAATGATTGTTACGCAAATGCCACGTCCAGTGCAACATCAGATCTATATGAACACAAGTGGAACCAATGTCATTCAAACCGGACCGATGCCCGTCCAGCAGCAGCTTATTCAGAAACAAATCCAAAATCAGCCAGGAAATGCAAATATTCTCTCTCAGCTCTCACATATCCCGGCCACAATCAAACTCCACCAAACCTCGTCGCCTATGATAACTTCATCAATTCCGCAATCTATTACAACAACAGCAGTAACTCCATCACTGCCTCGTCTTGGAAAATCGGTCTCCATAGTTCAACAGCAGGGAGTTCCTCCACCACAGACGCAGGTGACTCCGGCCGTAATGCAGGCGCAGATTGTCCAGCACACTGGAACTCCAGGCGGAACAGAAAAGCGACAAGTTATCATTTCAAGTGGCAGAACTATTGAATATGCGGATTCTCCCTCACAACAGGGACCGCAGATGGTGCGGATGATACAGCCCACGCAGGCAAAACCACAGATACAGGTGTCACAGAAAATAACTAATGTAGCTCCTCAAAAACAACCTATGCGACCAGGTTTGCAAATTCAACAGCAATCAGCTCCAACAACTCCAACAGTAACACCAGTGAAAATTCCGACTCCACCCCCGCCACCACCTCCGCCTGCACCTGTGCCCATTGCCCTTCCTCCGGCCACATCAACTCCTCCGCCAACTGCTGTCAAGATAGCACCTGTCAAAGCTAACCCCGAATCAAAAGTTGAAGTTAAAGTCGAGGTAAAAGTTGAACCGAAAACAGAGAAGATGGACGAGGATCCACCAGTTGATCCTAATTGGCTTTTCGTTTGTGATTGGCGTAATTGTCCCAGAAAGAGGTTCAAATCTATTGCTGATTTACATCATCATACCTGTTTGGTTCATTGCCCCGAGCATTTGGATGCTGGTGCTGAAATCTTTTGCCAATGGGGCACTGGACCAGGATTGTGTGATGGTATTCCACGCAAACGTTTCTCACTTATGACACATATTCTCGATCGCCATTTGACTATAGAGAGTCTTCGAGGAGCAGTTCAACGACGCCTGGCCAATGGTGTTCAAGCACCTAGTACAGGTCAGCCAgttacaattattaaaaatttagcagcggctgctgctgctgctgcacaACAACAAGCTGCTGAGAGTACACGTGGAACGGCATCGCCAGCTCTCTCCACATCATCTAATGGTTCAATGCCCTCGACTGGAAGCGCTGCTTTACATGCAATCAAAAGACACGCATCTGATTTCATCAATCCCAAAGAGCTTATGGACGAGAATGAAGGTCCAGTGACTAAAAGCATTCGACTAACAGCTGCTTTGATTCTACGGAACTTAGTCACTTACACTCCATTAGCTAAAAGGACTCTGCGTCAGTATGAACCACACTTGGCAAGCGTTGCTCTAAGTAATGTTGAATCCAGTGGAACTATTTCACAGATTTTATTCGAATTGAATAACTAA
Protein Sequence
MSTTELIQSAFPLPAQSEDSVSNCKNVGLKRTSRTESAEQDRGTFFRALQSFNESRNTPITRLPKINGQEVDLFVLYNEVTDRGGWLKVNIRNEWNELVESLGFQQTCVNAAVAIKSIYTRYLDKYERLHFLGEDPDKTDDLDDDGRPKKWASKTYNSIPMTYNYKQHEMNEEQRNANRMSEDLYKESEYDRLLLSLISPLPNEQDFAINVCTLMSNESKHTLKLDHCPKLLDALLAHAGVFCHYSMRELFQELYTNVRKHSLQSFWKDLLYDKPQILELSFDDFLTGKDIENADLEGPTIEKIFQDGLNADSEDVYMRSLDFLSLGPGLGTQEYIGQRIHQVSSIIRNLSFYEENTCVLAKNRTFVRFLVMGANIRWGNLHHMVLDMFGNIAMELDLLDPTLDELTRCLMSTICEGIESSDRGVIISCLEVLYKICQQDSNEEPIHKCLDQKFYNTLCLYLSLNDIMLLLYTLEAIYALSSLGHRSCNSLVQVKGVINSLVSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANIANLQNAIQTTQPPSQQPETTSLGRASPAPNRPIQEATPAHRTKSPVPTNQDHENFALSWLSATFEPTPSPDSRVEQQELYRMYLSAIQKCGRRGIVSHTQFPRMVRTIFGAQVVPNYNKKVENPEGSKIYYVCIRVRANPLPIQIKVSSQKGLKDGKQKLEPGSIKKTKKRIRLHEQLRQEKLQKHAVSPTPMSPVSIQKQQQTINTPVNQQFVKIETIVQQPSQQTQVGPQAMVKVEPQVVTTPLNQPPITPISKIVNSNQQQVIGNVVLTPTTQTTIVQQSAKPIQITTIAEQPQVALQHQIQLPISSQAQTQTQPQMQPKQQQQQQQQHIANSNSTTSTSTTTSNGGNGGAQPSSSLVKSLLANKVAQRQQKQKELAAQQQQQQQSSPMKMPTTSLSAVVNNPMMHTTPIKVGQTTIKPLNNNGNDKKTNTISSENSDNSNWDPIPPLAPLSSGTLIRSNVIIQQQQQQQVLSANDDSSSASIASSVLSSSQMEGDGSFASFEGLLMSKSNKNVSTFGIDDDSSKDSLSRGSRDSVRMMGANQMLVDLLDKKTLDPPISGKRKHEDDFDESEEKKMLMDAEPTVTASKNAANLYAEMAASILEDEDLEEEPPVPQQTSVIQQTKLAIQQQQQQHEPQNQIISMPVNMPRQLIMNPNNPHQMILSQGPQQSNLPTATATIKTDQGLQTVPCILQKNAMGQQILQPVMPQQQQPQPQTQYVLATNPQGQTYLVAQQTTQPQQQTQRLLVTQTPQQQAAGTKTIIILQQQGQPVGQQQMITTSQPQKVIMTTSQGQQMIVTQMPRPVQHQIYMNTSGTNVIQTGPMPVQQQLIQKQIQNQPGNANILSQLSHIPATIKLHQTSSPMITSSIPQSITTTAVTPSLPRLGKSVSIVQQQGVPPPQTQVTPAVMQAQIVQHTGTPGGTEKRQVIISSGRTIEYADSPSQQGPQMVRMIQPTQAKPQIQVSQKITNVAPQKQPMRPGLQIQQQSAPTTPTVTPVKIPTPPPPPPPPAPVPIALPPATSTPPPTAVKIAPVKANPESKVEVKVEVKVEPKTEKMDEDPPVDPNWLFVCDWRNCPRKRFKSIADLHHHTCLVHCPEHLDAGAEIFCQWGTGPGLCDGIPRKRFSLMTHILDRHLTIESLRGAVQRRLANGVQAPSTGQPVTIIKNLAAAAAAAAQQQAAESTRGTASPALSTSSNGSMPSTGSAALHAIKRHASDFINPKELMDENEGPVTKSIRLTAALILRNLVTYTPLAKRTLRQYEPHLASVALSNVESSGTISQILFELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00426898;
90% Identity
iTF_00663834;
80% Identity
-