Eeli006293.1
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- -
- Assembly
- GCA_951394125.1
- Location
- OX596028.1:98229333-98236075[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.06 5.6 8.2 3.5 3 21 61 79 60 80 0.94 2 11 0.00015 0.014 16.3 0.5 3 23 87 108 86 108 0.96 3 11 0.00025 0.023 15.6 1.5 2 23 140 161 139 161 0.98 4 11 0.0014 0.13 13.2 1.8 2 21 163 182 163 183 0.94 5 11 0.0016 0.15 13.1 0.2 2 23 663 685 662 685 0.96 6 11 0.045 4.2 8.5 1.8 3 23 714 735 712 735 0.91 7 11 0.06 5.6 8.2 1.4 1 21 751 771 751 772 0.95 8 11 0.002 0.18 12.8 3.4 3 23 782 802 780 802 0.96 9 11 1.8e-05 0.0016 19.3 4.7 1 23 808 830 808 830 0.97 10 11 9.4e-06 0.00087 20.1 3.0 1 23 836 858 836 858 0.98 11 11 0.19 18 6.6 1.9 1 20 864 883 864 885 0.92
Sequence Information
- Coding Sequence
- ATGGATTATACCTCCTTAGATGAATTACATTCTAGAGAACCTGAAGTACAAATATCAGAAGATTggctAGAGCCAAAAGATGAACCAACAAAAGAACCAGAAGAATCTTTAACACCAGATCGATCCCCCAACGAAGATCGTCTCCGCGAAGAAATAATCTCTGAGATAGTTTCTAATCATTGTAAATTCTGTAACATGTTTTTTAAAAGCCGCACAACTCTTAAGCTTCATGAAAGAAATTGTCAATACAAAAATGATTGTAGACTTTGTGGTCAGAAATTTGTAACCTCCTATGCTCTAAAtactcatttaaataaaattcataaccGTATGATAGAAAATGTATCTCCCCAAAAGGAGACGATAAAAACCACTTTGGGTCGACCACCTAATATAAGTCCCGGTAGTTCTGATAACCAATGTGACATTTGtagtttaaaatttgcaaattcaaGAGATCTcaataaccacaaaaagaagCATAACACCTGCCAGCAATGTGGAGAAAACTTTAAATCGTAcgaagattttaaaaaacatatttgtgAAAATATTGTTGTAAAAGAAGAAGatgaaagtGAAACTGAAACtccaactaaaaaaatattccgaGCAACAAATAGCATGGTTGTAATTCCAGGCGAAGAAGTGCATACGCCAGTCAGATCCAATGATAAAGTCAAAAATGcaaaaccaaaaaaaaggaaatttcgAGCTCTATTCGACGAAAATGCTAATGAATCTTCTTctGATAATGAGAATGGAAAGATTTCAATTGATAATTTCACCCCGAATACAAGTCCTAAGAGTGGGTTTTCAGTCGTAACAAGAGATACTGACTTTGAAGCATTCGCTCAACAAATGATGAAGGGATTTACAGATATTTCAGAACctcTACCCAAACTTACAGAAACGGAATCAATATCGAATCagattttaaaaagattacAAGTTTCAACTGATGGagaGAATAAAGACAGTGAATGTGGTCAACGTGAATTTATTGCAAATACCAATTGTATTACAAAAGCTGAAGCTCCTCAGGCCGATAATGTTATTGTCGACTATGAAggaaatgtttacaaaatactaaaagaaaattttgtaagtGAATCGGCATTAATCAAAGACGAACCCCTCGATGAAGCAGAAACAGATGAAGAAGCAGCCAAACCAAAAATGCCATCCCCATTGCCTTTCATAAAAGATGAACCTCCAGATCAGCCTAATATAACCGACTCTACTGATTTATTGTTAGAAGAACTATTCGATCGAAAAGCCAAATCAATAGCAAAAAATGCAATCAATGATATATTTGAAAACAGTGGGAAGGAATATCTGACGCTAGGTTATGGGTCTGAATGTTTGAGCGGAAACGAAATTTTAGGAGATACTTACTCAAtagcaaaagaaaattcttCTTCAGCGAACCTTATTGACTCCGCGGGAGATGAAACTTCTTATTCAGCCGATCATAATCGCCTAAAAGCAGACGCAGATCACATACCAATAGACGATAATGCTTGCAGCGGAGACAAGGTTGAAATGGCTTACCCAGAAGATCTTGTATCGGTGAAAACTGAAGATGTGGATTgtaaagaaattgaaataaattcatcagTAGACGAAAAAACATGCGAAATTAATTCCAGAGACAATTCTAGACAGCAACCAAGCAGTGGGTTAGAGATTTCTTCAAGTGGTGATTTTGACTTTGAGGAAGTGATACAATCAAATAAgcttccaaattttaataaCGTTAGCAAAGTTATCAAAAAACTTacagaagaatataaaaaagcagaaaaagttaaaatagaagATAAACCTGCAATCGTTGAAGTTGATAGCCAGGCAAAACAAGTATTACCAGAAGCCATTAAAGACGAGACTAAACCTAGCTCGTTGTTTTTCCCAATGTTAGATGATACACAAGTATATAATATGGTAGCTAAtgctttgaatgaaaaataccGTTACGTATGGATTTGTCCAATGTGCCCAAGACAGTATTCTCAACTTCGACCATTCAAAAAACACCTGCTGACaatacatttcaaaaatacaaatgaacTTGAAGGACAAGCCTTTGAACTGAGACCTGAGTTGGTTGTAGACGCTGGACCCGatgAAACGTTTTGTCATTTATGTCATGTTACACTTGCAGACAATGCCACTCTACGAAAACATCAAGTCGAAATGCACAAAGAGCAAGACCTAACCCTAAGGCAAAGGAAAAAACCACTGCTACATAGGTGTTATATATGCTCTAAGCTGTGCGCATCGCGAACCTTATTGGCGGAACACATGAATTCTGATTGTGGTAAAAATCCACAATACGGATGTAAtgtttgcgaaaaaaaattccatacgAAAAGTAccttaaatttacataaaaccaTGCACACTGGCGAGTTGCCACATTCTTgtgaattttgtcaaaaaagattCCGAACGAGAGGTCAATTGACTGTGCACACGCGGACGCATACAGGAGAGAAACCATTTCCCTGCAAAGTTTGTGGACAATGTTTTACCCATCGTGAAACTCTAATTGCCCATCTCTCACGTCACATTGACATGAAACGCTACAAATGTTATGGCTGTGATCAATTCTTTTCCTGCATTTCTGGCCTTAAAACACACAGATCAGTGCGTCCAGACACATGTGGTCGCGTTGAACTTAACGCACGTGCTGTCGGTCCACGAGTACGAGTTATTAAGGGTAATGTAATCTTCGAACCCCAACCATTATACAATGCAAGATTAGCAAAAGTTGAGAAACCCGTGCTAGAATCATATGTACTGGATCATAATTATTATAGAAAGGATCATCTTCAGACTAAAAAGGTctctaaacaaaatattaagagTGAACCCATTAACATTAATATTACGCCGAAAAATAGTTTgagtgaatgttttttttaa
- Protein Sequence
- MDYTSLDELHSREPEVQISEDWLEPKDEPTKEPEESLTPDRSPNEDRLREEIISEIVSNHCKFCNMFFKSRTTLKLHERNCQYKNDCRLCGQKFVTSYALNTHLNKIHNRMIENVSPQKETIKTTLGRPPNISPGSSDNQCDICSLKFANSRDLNNHKKKHNTCQQCGENFKSYEDFKKHICENIVVKEEDESETETPTKKIFRATNSMVVIPGEEVHTPVRSNDKVKNAKPKKRKFRALFDENANESSSDNENGKISIDNFTPNTSPKSGFSVVTRDTDFEAFAQQMMKGFTDISEPLPKLTETESISNQILKRLQVSTDGENKDSECGQREFIANTNCITKAEAPQADNVIVDYEGNVYKILKENFVSESALIKDEPLDEAETDEEAAKPKMPSPLPFIKDEPPDQPNITDSTDLLLEELFDRKAKSIAKNAINDIFENSGKEYLTLGYGSECLSGNEILGDTYSIAKENSSSANLIDSAGDETSYSADHNRLKADADHIPIDDNACSGDKVEMAYPEDLVSVKTEDVDCKEIEINSSVDEKTCEINSRDNSRQQPSSGLEISSSGDFDFEEVIQSNKLPNFNNVSKVIKKLTEEYKKAEKVKIEDKPAIVEVDSQAKQVLPEAIKDETKPSSLFFPMLDDTQVYNMVANALNEKYRYVWICPMCPRQYSQLRPFKKHLLTIHFKNTNELEGQAFELRPELVVDAGPDETFCHLCHVTLADNATLRKHQVEMHKEQDLTLRQRKKPLLHRCYICSKLCASRTLLAEHMNSDCGKNPQYGCNVCEKKFHTKSTLNLHKTMHTGELPHSCEFCQKRFRTRGQLTVHTRTHTGEKPFPCKVCGQCFTHRETLIAHLSRHIDMKRYKCYGCDQFFSCISGLKTHRSVRPDTCGRVELNARAVGPRVRVIKGNVIFEPQPLYNARLAKVEKPVLESYVLDHNYYRKDHLQTKKVSKQNIKSEPININITPKNSLSECFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -