Eeli010946.1
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- pol
- Assembly
- GCA_951394125.1
- Location
- OX596029.1:69801679-69825584[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0019 0.18 12.8 0.1 1 23 1155 1177 1155 1177 0.98 2 12 1.2e-05 0.0011 19.8 3.2 1 23 1186 1208 1186 1208 0.96 3 12 0.0014 0.13 13.3 2.7 1 23 1214 1236 1214 1236 0.96 4 12 3e-06 0.00028 21.7 2.0 1 23 1242 1264 1242 1264 0.99 5 12 8 7.4e+02 1.5 1.4 1 8 1270 1277 1270 1278 0.92 6 12 0.013 1.2 10.2 5.4 1 23 1421 1443 1421 1444 0.95 7 12 7.6e-07 7e-05 23.6 4.1 1 23 1450 1472 1450 1472 0.96 8 12 0.0013 0.12 13.4 0.5 1 23 1627 1650 1627 1650 0.97 9 12 0.0043 0.4 11.8 5.6 1 23 1656 1678 1656 1678 0.96 10 12 0.031 2.9 9.1 4.1 1 23 1684 1706 1684 1706 0.97 11 12 8.5e-06 0.00079 20.3 1.3 1 23 1712 1734 1712 1734 0.98 12 12 0.0009 0.084 13.9 4.3 1 23 1740 1762 1740 1762 0.98
Sequence Information
- Coding Sequence
- ATGACTGGACGCGGGATCAGTACCAGGCTAGCCCAGGTGAACATTCATCATGCTAAGGCGGCTTCAGCTGTCATAGCACAAAAATTCACTGCTGATAACCTGGGACTAGCACTGATCCAAGAACCCTGGATATACGGGGGCCAAGTAAGGGGCCTAACAAAATTTATGACACGGGACCTGGTACCAATACAGGCTCAAATCTACATCGAGGGCAATCCCCAGACGATGGTAATTGCAGCTGCTTACTTCCCCGGTGATGAGGCCAACATACCACCAGTGGAAGTACAGAAACTTGTGGATTACTGCAACAACAAAAGACTACCGTTTATGGTTGGGTGTGATGCAAACGCCCACCATACAACATGGGGTAGTACCGATATAAACCAAAGGGGTGAGTACCTTTTAGACTATATTATCGAAAAAAATCTAGATGTATTTAATGTAGGGAACACCCCTACCTTTGTTACTAGAACTAGAGAAGAAGTTTTAGACTTAACGTTCGGTACCCAGAACCTAAGTCGTTTAATCAGGAACTGGAGAGTCTCCAATGAACCCTCAATGTCTGATCATAGAATTATAGTGTTTACCTTAGAAAACCTTCTCACAGAGATTACCTCTGGTAGAAATCCTAGGAAAACAAACTGGAATCTTTATAAAAACACTCTCAAGATTAACCTTGAGCAATTAGGTCCCGGTAAAACGACAAACAGTCACCTTGAGTTAGAATATATAGTTAAAGAGTTTAGTGGAGCGATAAATGAGGCTTATGAACTTAGTTGTCCGCTAAAACCCATAAAAAAGCAGAAGGATGCTCCATGGTGGAACAACAATCTGTCTAAACTTAGAACCAAGGTTAGGAAACTCTTTAATGAGGCAAAGAGAACTGGAGAGTGGCAAAACTACTCTTCAGAATTGACTAAATATAACGGGGAAATAAGGAAAGCTAAGAGaaatagttttgtaaatttctgCGAGGGTATTTCATCTACCCCTGCAGCAGCAAGACTGCACAAGGCTCTAGCGAAAGAGAAGGCATTAACATCGTTAGCACTTCGTAAACCCGATGGTAGCTTCACAGAAAATGAGGACCAAAGGTCTACCCTTTTACTAAACACTCACTTTCCGGGCAGTTTACCAACTACAGAGAATACAATAGAGAGAACACCTCTCAAACCGAACCGGGAAAGCTGGAAGATAGCCTCAACTATCTGTTCAGGTAGCAGAATAGATTGGGCAATAAACACCTTTCAACCTTTTAAGTCACCGGGTGTAGATGGTATTTTTCCTGCACTCCTGCAAAAAGGGAAAGAGGAAATAATGCCCCATCTCATTAGCATACTTCGAAGTAGTGTTGCACTTGGGCACATACCAAGTCTATGGAGAAGAGCTAGAGTTATTTTTATtcccaaaattggaaaaaaagacaCGACACATCCCAAGTCATTCAGGCCAATAAGTCTAACATCCTTCTTACTGAAGACTTTGGAAAAGGTAGTTGATAACTTTATCAGATCAGAAGTTTTATTAAACATGCCTCTAAACCACCGCCAGCATGCTTACAGAGCAGGAAGATCTACAGAAACTGCCCTGTTTGAACTCACGAACTCCTTACAAATTGCTTTGGACGCTAAAGAAACGGCTTTATGTGCCTTCTTAGATATTGAGGGGGCATTTGACAACACCTCTCATGAGGCTGTAAACAAAGCACTTATAAGGAAGTGTGTACCTATCCCTATAATAAGATGGATAAGTGAAATGCTAGGCACAAGAACGGCGGAAGTACACGCAGGACAAAACGTCCAGAAGGTCATCACAACAAGAGGCTGCCCTCAGGGAGGTGTTTTATCACCCCTGCTGTGGAGCCTTGTAGTGGATGAACTACTAGAAAGTCTCACTGCTCAAGGCATAAGATGTATCGGCTTTGCTGATGACATCGTCATCACAGCCTTGGGTAAGTTCGAAGAAACTCTTTGCGACATAATCCAAAGAGGATTGTTAATAACAAGGAAATGGTGTCTATCAGTAGGACTAAATATTAACCCTACCAAGACAACTATAGTACCATTTACCAAGAAAAGGCTTCTGCCACGCATGAAACCAATTCGGTTAGCTGGCGAAGTAATCGACATCCAGAGGGAAGTTAAATATCTAGGAATTACACTAGATAGCAAACTACTCTGGAACAAACATGTCAAGTTAACTGTCGGAAAAGCCACAAAGGCCCTCATGATATGCAAGAGAATTGCAGGTAAATCATGGGGCTGCAAACCACATATACTAAGGTGGATGTACACCATGATGGTAAGACCCATCCTTACCTATGGTGCGATCGCATGGCACAAAAGAACCGAACTAAGCACAACTAGGAAATCACTAGAAAAAGTTCAAAGGCTCGCATGCTTATGCATTACTGGAGCAATGAGAACATGCCCTACAGCAGCAATGGAGGTAATCCTTCATTTGACTCCATTACATGTAGTCATAGAAAGTGCTGCTACGGGAGCCTTCATGAGATTCGCCAAGGAGGGAACTGGGACAGGTAAATGCATTGGTCTGAGAGAGAGGAACTCGATCTGCAAGTCCACAGTAACGAACCTCCTTGACATCCCAAGAGATGGTATgactaaaaaatataacttcgtgaaaaacttccaaacggaGTTAAGTAACAAGAAAGAGTGGGTAGGCGAATCAGTGAACTATACTCTTAAGGAAAACaccatcaagtggtacactgatggatcgagaacaaCAGATGGCACTGGGGCAGGTATatttgggcctagaaccaaactcTCCCTGCCGATGGGTCAGTCCACCAGCATTTTCCAAGCGGAAGTCAACGCCATTGGTAAATGTGCAGAGCAAAATCTCGAAAGGAAATACCGTAatcaaaacattgccatcatgTCAGATAGCCAAGCCGCACTCAAAGCGCTAAATTCATACACCATCAGCTCTAAACTGGACGAACATATTCCTGATGTTAAAGTTGAGCCACTACAAGATGCTCCAACAACAACTAATGCAGCCATagacaacgacgatgacgatgaaaaaagtttaatagaTTTAGATGCAGGAGCTGTATCTCAAAGTTccgaagaaaatgaaataatcgAAGATGAAAAAAAGGATATCAAAACTATTATCGACCCAGTAACAAATTCAGAAAATGTAACGGAATATAAAGCAGAAGATGAGCAAAGCTGCAAGCAAATTGAGGAAGTGCTAACCGAAGAAATCAAGGTTCCACGAAGACGAGgacgaaaaaaagtattatatgAACCATTAATATCGATTTCATCAAAAGCCGAAAGTCTTGGTGTGAGTGCAGATAAGAAAAATGATGAAGTAGCTGAGAACAACTCAGACTCAGAGACTAAGAGCAAGGGAAAAGAAGACAGTCCACAGCCGGCAGATAAGAAGTCCAAGAAGAAATActatcgcaaaaaaaatgttttcccttGTCCAATTTGCAAAGAAAATATCATCGATGGTAGGTCTCTTAAGAAACATATTCGATCGCACAATGAAGGCGGCAACGAAAATCGTTTTCAATGCGAGGAATGCGGCAAATGCTATAAAAActcatttaacttaaaaacCCACTCGATTATCCACTCAGGAACGCGCCCATTTAAGTGTGAGTTTTGCGATGTTGGATTTTCGCATCCAAACTCCCTGAAGACTCATCGCTTTTTACACACTGGTGATAGGCCTTACAAGTGCGATCAATGTGACAAATCATTTGTATCCAATAGCAGCCGAAAAGTTCATATGCGGCAGCATACAGGTGAAACCCCATATGTGTGTCAGTACTGCGGAAAAGGCGAACATATATCAGAtgctgaaaatgattttgataagGATGATCCCTTGGATTTTCCCCGAAATGAAGAAGAAGTTGTTATCAAGTTGGATACAGATGTAACGGCAATTGATTGCAATAATAAAGTTGAGGATGTTGACACAAGCAACAGTTGTTATATTTCGACACAAAACTGCAATGAAATGCATTTCGTGCCTGGccaatttgaaaatgaaatggcAGTAAATATTAAGACTCAAACAAATAAGGTAACAAAAACAAGTATAGAAACATTGGGATTAACAGAAGACATTCTGAAGTCTGATGATTCCGAAAATTTTAATGATAGAGAGGGCTCAGCAAATGGAAGTTTGATTTGTAGGAACATTGAAAATTTGCTTTCGGCACCAAAAAATGTTCCGAAAAAACGAAAccgcaaaaaaaaagtccactCATGTTCAATTTGTCAGCATGTAGCccgaaataaaaattctttacaatCACATATGCTATCACACCATGGTACGGGAACTCAACATCAATGCGAGGAGTGTGGCAAGTGTTTTAGAAATAGATCTAATCTTAAATCTCATTTGGTTATTCATTCCGGAACTCGTCCTTATAACATTGTAATTTTTGGAAACCACATTAAAGACACACACATTACAGATACGGAGAATGTTCCATATACTAAGGATGAGAATCCTTTAAATGTGTATCCAAATGAGCAGCTTGTAATTAAATATGAGACAGATGTAAGAAACGGGAACTGCAGTGGCCAAGCTGGTGAGACGAGCAATAATTTGACTGCAAAACCAATTTTAGAGGAAACAATCGAAGAATACAAATTTGATGGTGATAAAGCGCTAGAAAACTGTAGTAACGGTCTTGTCATTAACAACCAATCTGACGGTGATGAAATACATGAAGGCATTAAGTCTATTTCCAAAACCGTAAATGGCAATGTAAGGAGCATTCGAACAAATAAAGTTTTGATTTGTAAGGACATTGAAGATCTAACTGCAtcgaaaaaaactcaaaaaaaaaggaatcgaAAGAAGAAAGTTTACTCATGTCCAATTTGTCAGCACATAGCCCGTGATAAAAAATCTTTGGAAGCGCATTTACAATCCAATCATGGAACTGGTACTCGACATCAATGCGAAGAATGTGGCAAGTGTTTCAGAAACGGAAATAATCTAAAATGTCATTTGATTATACATTCCGGAACTCGTCCCTACAAATGTGATTCTTGTGAttctgatttttctcattacacCAGTTTAAAAACCCATCGTTACATACACACAGGTGAGCGGCCGCACAAATGTAATGAATGTGCTAAGGGATTTGTTTCAAGTAGCGGACTTAAAACTCATATGCGAGAACACACCGGTGAAGTACCATACGTTTGTCAATTTTGCAAGAGAGGATTCGCTAGTAAATGTTCTTATAAAAGACATATGATAAGTCATTCAGGCCGAAGAGCTTACGAGTGTCAACAATTAGTGATTCAGCATGTTTACTTCTACGAACTCTGA
- Protein Sequence
- MTGRGISTRLAQVNIHHAKAASAVIAQKFTADNLGLALIQEPWIYGGQVRGLTKFMTRDLVPIQAQIYIEGNPQTMVIAAAYFPGDEANIPPVEVQKLVDYCNNKRLPFMVGCDANAHHTTWGSTDINQRGEYLLDYIIEKNLDVFNVGNTPTFVTRTREEVLDLTFGTQNLSRLIRNWRVSNEPSMSDHRIIVFTLENLLTEITSGRNPRKTNWNLYKNTLKINLEQLGPGKTTNSHLELEYIVKEFSGAINEAYELSCPLKPIKKQKDAPWWNNNLSKLRTKVRKLFNEAKRTGEWQNYSSELTKYNGEIRKAKRNSFVNFCEGISSTPAAARLHKALAKEKALTSLALRKPDGSFTENEDQRSTLLLNTHFPGSLPTTENTIERTPLKPNRESWKIASTICSGSRIDWAINTFQPFKSPGVDGIFPALLQKGKEEIMPHLISILRSSVALGHIPSLWRRARVIFIPKIGKKDTTHPKSFRPISLTSFLLKTLEKVVDNFIRSEVLLNMPLNHRQHAYRAGRSTETALFELTNSLQIALDAKETALCAFLDIEGAFDNTSHEAVNKALIRKCVPIPIIRWISEMLGTRTAEVHAGQNVQKVITTRGCPQGGVLSPLLWSLVVDELLESLTAQGIRCIGFADDIVITALGKFEETLCDIIQRGLLITRKWCLSVGLNINPTKTTIVPFTKKRLLPRMKPIRLAGEVIDIQREVKYLGITLDSKLLWNKHVKLTVGKATKALMICKRIAGKSWGCKPHILRWMYTMMVRPILTYGAIAWHKRTELSTTRKSLEKVQRLACLCITGAMRTCPTAAMEVILHLTPLHVVIESAATGAFMRFAKEGTGTGKCIGLRERNSICKSTVTNLLDIPRDGMTKKYNFVKNFQTELSNKKEWVGESVNYTLKENTIKWYTDGSRTTDGTGAGIFGPRTKLSLPMGQSTSIFQAEVNAIGKCAEQNLERKYRNQNIAIMSDSQAALKALNSYTISSKLDEHIPDVKVEPLQDAPTTTNAAIDNDDDDEKSLIDLDAGAVSQSSEENEIIEDEKKDIKTIIDPVTNSENVTEYKAEDEQSCKQIEEVLTEEIKVPRRRGRKKVLYEPLISISSKAESLGVSADKKNDEVAENNSDSETKSKGKEDSPQPADKKSKKKYYRKKNVFPCPICKENIIDGRSLKKHIRSHNEGGNENRFQCEECGKCYKNSFNLKTHSIIHSGTRPFKCEFCDVGFSHPNSLKTHRFLHTGDRPYKCDQCDKSFVSNSSRKVHMRQHTGETPYVCQYCGKGEHISDAENDFDKDDPLDFPRNEEEVVIKLDTDVTAIDCNNKVEDVDTSNSCYISTQNCNEMHFVPGQFENEMAVNIKTQTNKVTKTSIETLGLTEDILKSDDSENFNDREGSANGSLICRNIENLLSAPKNVPKKRNRKKKVHSCSICQHVARNKNSLQSHMLSHHGTGTQHQCEECGKCFRNRSNLKSHLVIHSGTRPYNIVIFGNHIKDTHITDTENVPYTKDENPLNVYPNEQLVIKYETDVRNGNCSGQAGETSNNLTAKPILEETIEEYKFDGDKALENCSNGLVINNQSDGDEIHEGIKSISKTVNGNVRSIRTNKVLICKDIEDLTASKKTQKKRNRKKKVYSCPICQHIARDKKSLEAHLQSNHGTGTRHQCEECGKCFRNGNNLKCHLIIHSGTRPYKCDSCDSDFSHYTSLKTHRYIHTGERPHKCNECAKGFVSSSGLKTHMREHTGEVPYVCQFCKRGFASKCSYKRHMISHSGRRAYECQQLVIQHVYFYEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -