Basic Information

Insect: Epistrophe eligans
Gene Symbol: -
Assembly: GCA_951394125.1
Location: OX596029.1:107314350-107318438[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.9e-05 0.0018 19.2 1.8 5 23 301 319 298 319 0.94

2 9 9e-07 8.4e-05 23.3 2.5 1 23 325 347 325 347 0.97

3 9 0.00066 0.061 14.3 4.9 1 23 353 375 353 375 0.98

4 9 4.2e-06 0.00039 21.2 1.8 1 23 381 404 381 404 0.97

5 9 7.6e-05 0.007 17.3 0.4 1 23 414 436 414 436 0.96

6 9 0.00062 0.058 14.4 5.0 1 23 509 531 509 531 0.98

7 9 6.3e-05 0.0059 17.5 1.2 1 23 539 562 539 562 0.96

8 9 0.0074 0.69 11.0 0.0 3 23 572 593 571 593 0.95

9 9 0.023 2.2 9.4 2.7 3 23 600 620 598 620 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.9e-05	0.0018	19.2	1.8	5	23	301	319	298	319	0.94
2	9	9e-07	8.4e-05	23.3	2.5	1	23	325	347	325	347	0.97
3	9	0.00066	0.061	14.3	4.9	1	23	353	375	353	375	0.98
4	9	4.2e-06	0.00039	21.2	1.8	1	23	381	404	381	404	0.97
5	9	7.6e-05	0.007	17.3	0.4	1	23	414	436	414	436	0.96
6	9	0.00062	0.058	14.4	5.0	1	23	509	531	509	531	0.98
7	9	6.3e-05	0.0059	17.5	1.2	1	23	539	562	539	562	0.96
8	9	0.0074	0.69	11.0	0.0	3	23	572	593	571	593	0.95
9	9	0.023	2.2	9.4	2.7	3	23	600	620	598	620	0.95

Sequence Information

Coding Sequence: atgaattttaaagttgatatAAGTGTCTGTCGTGTTTGTATGAAATCTGAAAATggaatttcacttttaaaagaCGCCGGATTGCTAGAGAAATTTGTTTACACTACCAAACTCAAGGTTAAAGCAGACGATAATCTGCCAGcgattttgtgtgaaaaatgcATAACACGTCTGAAAGTAGCCTACGACTTCTGTCGGGCGGCCAATATATCAGAGAAGCACTTGCGAAAATTCATCAGCAAAATAAGTCTTGACTTCCGAGAAGTCACGAAAACTTTACCCAACGATGAGGATGAAGACTACGTCGTAGTTGAAGATTTCGAAACGATGGACCAAGACCAAGCTTTGCTTGACGAACCTGATGAAAATATTCCtacaccaccaccgccacctgCTGTAGAAGAGacaataattcaaaatagaaatttaaagatAGAAGCAACTGAGATAGTAGAACATGAAGAAATTGAGCTGATGGTGGAGGAGCCACAGCAGAATAACGTTGTTATTGGAAAGCAAGAAGCTTTGGGATCGGAAATCCAAATGGAAGAATTCCATGAGATAATACAAGACGATGAGTGCGATACGAATCTTTATCTGGACGAGAACACATATGAAGAGCTGCAATTGTATGAAGGGGAAGAAGGTGAAATCTACGAAGATCAACAAGCAGATGAAGAAGcaaTGTTTGATAATTTGATAGCAGATGCCGATGCCGACGGAGAAATTATAGCTGACCATATTGATGAATTTTCTGGAACCGATGGCGGTGAAGAATTAGCAAAGTTAAATCTTCAGGAACAGAAAAAGACTAGGCTTAAGAAAACTAATCGCAGTTCGAAAAGGATTAGTGGTGAATCTGCTGCGTCAAAGATTGAAGGTAAATCGAATATTTGCATTAAATGCAATAAGGATTTTAGCACTAAAACAAACCTCATGAGACACATGAGCACACATGATGGTGCTAAGCCCTTCAGATGTCACACTTGTGGCAAAGGATTTACCCAGAATGGATCGCTTAAACAACATATTTTCATCCACACGGGTGAGAAACCTCATGTTTGCCACGTTTGTCAAAGAGGTTTCACGCAAAGCAAGAGCCTCATTTTCCACATGCGTCGACATACAGGTGAGAAACCTTTCAATTGTGAGGAATGTGGGATTAATTTTAGACAAAAAGACGGATTGAAGcATCACATTCAAAAGTACCACGGCGAAGGACAGGCTAAGCGAGAACCTCACATTTGTCCTGTGTGCCAAAGAGTACTTTCATCCAAGTATGCCCTGGCTACTCACATCAAGAACCATCAATCGAAAACAGATGAACAAGAGTCAGAGATAATGGAAAGATGTTTTGAGAGCAATGTCAAGATAGAAAGATCTACCGTAAAAGATCAAAAATCCGAAGGTCAGGAATATTCAAGTACATCAACAGGACAAGTCTCTTCGCAAGTAATTGATCTAAGCGAAGAAATGGAGCCAAAACCAATCAGTCATGCAGGTGCTGGAATCCGAATGAAACAGTTTCAATGcgcaaaatgttttaaatcgtTCCATATAAAgAGAAACCTCCTTCGTCATTTGCGGAACCACGATGTGAGCTCGTTAGAATTGCATGAGTGCACCGAATGTGGCATAGGATTTGACACAAAACGTTCGCTAAAATTACATCGTTTACGCGATCACAAAGAAGTCGTTTATGACTTAAATAATTGTGAATATTGCGATGCACCATTTGTGTCAGTAACCGATCTCAGCGAACACATAGCAAGCGAACACGATGCTATTGACCAGAATTGTCCTCATTGCAGTGAACATTTTGATTCGCAGAAATTGTATTATGATCATTTGTTAGAACATGAACATTTGCTAgataattaa
Protein Sequence: MNFKVDISVCRVCMKSENGISLLKDAGLLEKFVYTTKLKVKADDNLPAILCEKCITRLKVAYDFCRAANISEKHLRKFISKISLDFREVTKTLPNDEDEDYVVVEDFETMDQDQALLDEPDENIPTPPPPPAVEETIIQNRNLKIEATEIVEHEEIELMVEEPQQNNVVIGKQEALGSEIQMEEFHEIIQDDECDTNLYLDENTYEELQLYEGEEGEIYEDQQADEEAMFDNLIADADADGEIIADHIDEFSGTDGGEELAKLNLQEQKKTRLKKTNRSSKRISGESAASKIEGKSNICIKCNKDFSTKTNLMRHMSTHDGAKPFRCHTCGKGFTQNGSLKQHIFIHTGEKPHVCHVCQRGFTQSKSLIFHMRRHTGEKPFNCEECGINFRQKDGLKHHIQKYHGEGQAKREPHICPVCQRVLSSKYALATHIKNHQSKTDEQESEIMERCFESNVKIERSTVKDQKSEGQEYSSTSTGQVSSQVIDLSEEMEPKPISHAGAGIRMKQFQCAKCFKSFHIKRNLLRHLRNHDVSSLELHECTECGIGFDTKRSLKLHRLRDHKEVVYDLNNCEYCDAPFVSVTDLSEHIASEHDAIDQNCPHCSEHFDSQKLYYDHLLEHEHLLDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426578;
90% Identity: -
80% Identity: -