Basic Information

Insect: Epistrophe eligans
Gene Symbol: -
Assembly: GCA_951394125.1
Location: OX596028.1:80101757-80104738[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 7.7e-05 0.0072 17.2 1.1 2 23 110 131 109 131 0.98

2 16 2.7e-06 0.00025 21.8 1.0 1 23 137 159 137 159 0.97

3 16 4e-05 0.0037 18.1 0.5 1 23 165 187 165 187 0.97

4 16 0.00012 0.011 16.6 1.4 1 23 193 215 193 215 0.97

5 16 0.00098 0.091 13.8 4.1 3 23 223 243 221 243 0.98

6 16 3e-05 0.0028 18.6 3.3 1 23 249 271 249 271 0.99

7 16 0.58 54 5.0 1.7 1 21 376 396 376 397 0.93

8 16 3.6e-05 0.0034 18.3 0.2 1 23 405 429 405 429 0.98

9 16 0.002 0.18 12.8 0.2 2 23 431 453 430 453 0.89

10 16 0.00055 0.051 14.6 1.1 1 23 459 483 459 483 0.96

11 16 7.7e-06 0.00071 20.4 6.3 1 23 489 511 489 511 0.99

12 16 6.1e-07 5.7e-05 23.9 0.8 1 23 517 539 517 539 0.99

13 16 0.00015 0.014 16.3 0.1 1 23 545 567 545 567 0.98

14 16 0.0057 0.53 11.4 0.2 1 23 573 595 573 595 0.97

15 16 0.00014 0.013 16.4 4.6 1 23 601 623 601 623 0.99

16 16 2.8e-05 0.0026 18.6 1.2 3 23 631 652 629 652 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	7.7e-05	0.0072	17.2	1.1	2	23	110	131	109	131	0.98
2	16	2.7e-06	0.00025	21.8	1.0	1	23	137	159	137	159	0.97
3	16	4e-05	0.0037	18.1	0.5	1	23	165	187	165	187	0.97
4	16	0.00012	0.011	16.6	1.4	1	23	193	215	193	215	0.97
5	16	0.00098	0.091	13.8	4.1	3	23	223	243	221	243	0.98
6	16	3e-05	0.0028	18.6	3.3	1	23	249	271	249	271	0.99
7	16	0.58	54	5.0	1.7	1	21	376	396	376	397	0.93
8	16	3.6e-05	0.0034	18.3	0.2	1	23	405	429	405	429	0.98
9	16	0.002	0.18	12.8	0.2	2	23	431	453	430	453	0.89
10	16	0.00055	0.051	14.6	1.1	1	23	459	483	459	483	0.96
11	16	7.7e-06	0.00071	20.4	6.3	1	23	489	511	489	511	0.99
12	16	6.1e-07	5.7e-05	23.9	0.8	1	23	517	539	517	539	0.99
13	16	0.00015	0.014	16.3	0.1	1	23	545	567	545	567	0.98
14	16	0.0057	0.53	11.4	0.2	1	23	573	595	573	595	0.97
15	16	0.00014	0.013	16.4	4.6	1	23	601	623	601	623	0.99
16	16	2.8e-05	0.0026	18.6	1.2	3	23	631	652	629	652	0.97

Sequence Information

Coding Sequence: AtggcaatgaaaataaaaacagaaaatgaagcTCAAAATCAAGGTGCTATAGAATACAAAACTTCTATGGCACCGAACTCTGAGGAAAACAACAAGAATGATTTAATCGATTGTtcacaaattcaattaaatgataCTGATAAAAACAATCTGATGCATTCCACTGAAAACAGATCTCAAACAAATCAACAATCAATGTCCAATTATGAAGTGCAAACTGAGCACATAACTCCTGATGGCACTCGTGTGGAATTTTTTTCGATAATGGAAATTGAagacacaaatataaaaaaagaacctaTAGAAAATCAAGGCTTGAAAAAGAACCAATGTTGGGTTTGCCAAAAAAtttttcgaggaaaatgtcTCCTAGAAATACATATGCGCATCCACACTGGAGAAAAGCCATTCAATTGCACGCTATGTGGAAAAAACTTTCGACAGAAAGCAGCTCTCAAGACTCATTTATTGAATCACACGAAAATCAAACCATTTAAGTGTGATCAGTGTGAACGAGCTTTCGCCTCACAAAAAGATCTAACATCTCATTCTTTGATTCATTCCTGCGAAAGGCCATTCAATTGTGAGGTATGCAATAGATCATTTGTATCtgagaaaactttaaaatatcacCGAGCTCGACACACCAGGGGATATCCATTTGGGTGCGATATATGTGAGATGCGATTTTGTTATATGCATCTCCTTCGACGACACATGCTTACCCATACTGGCGAGAAGCCATACAAGTGTAAATATTGCGGTAAAGGATTTCGACAGAGACACGAATCAGTTGTTCATATGCAAACACATCCAGAAGCCAATGACGACAAAGATAAGCCATCACTCCAACAAGTGCTGGAACTTATAAATTCTTTGCCCAGAGAAGGAGATATGTGTGAATCCAAAGATCAGCCAATAGTTAACGCAAACGAAATCAATAGTAACCAATCCATTGAATTTTCCTCAAGTTTTTGCAATATCAACCAACCAACCTCTTATGATCAAGAACAGCCGCATGTTTctactgaaattgaaaaaaatgtacataatgaAGACTTAAAAACCAATTTAGACTTTTCTGCAATCAAAGTTAAACCGGAACCCatggagtttttaaaaaaatttatttgcaaatgcTGTGGGGCTCGCTTTGCTTTGCAAAATACCTTAAGTCACCATGTGCGACAAAATAAGTGTTCTCAAAAGCACTTTACATGTCCAAACCCGAAATGTAAAAGGGTGTTTGCTTCTCAAGAGAAACTTGATGCTCATATTCTTACTCACACATATTGCGATTTATGCGGTCAATCCTTTAGCAGTAGTGAAGAAATTGAAACACATAAAGCAGAACAACATAATTTGAAGATAAAACATCCGTGTCCGCATCCTACGTGCAATAAAGcTTTTTATAAAGGAGGTCAACTCGAAAAGCACATTGAAACTcataatatcaaaaaagaatTCCAATGCACTCTTTGTGATAAAAGTTTTCATCGAAAATTCTATCTCACACAACACATGAATCGTCACACAAAAACACGACCCTTTCAATGTGAACAATGTTCAAAAGCATTCTATAGCTCTGGAGAACTTCAAAGACATATTATGCGACACACTGGTGATCGTCCATTTCCATGTGATATGTGTGAAAAAACATACCCTCTAGCAAGCGAACTAAGAGTTCACAAGCAATCTCACTCAGGCGAAAGACCATTTGCTTGTGAATTTTGTCCGATGCGATTTGGGTTTGCAAACGTTCTTAGAAAACACCTGATAACGCACACTGGTGAAAGATCATTCAAATGTAATATCTGCGGCCGAGGATTTGTCCATAGACAAAATTGCGAAGACCACATGAAAACACATTCGGGTGAGAAAGAATATGGTTGTGAGATTTGTGATTCAAGATACTACACAAAAGATTCTTTGCGAAAACATATgagaaaaaatcacaaaaatattccACTTACCGAAGACAGTGTTACTGAAAGTATGAATTAA
Protein Sequence: MAMKIKTENEAQNQGAIEYKTSMAPNSEENNKNDLIDCSQIQLNDTDKNNLMHSTENRSQTNQQSMSNYEVQTEHITPDGTRVEFFSIMEIEDTNIKKEPIENQGLKKNQCWVCQKIFRGKCLLEIHMRIHTGEKPFNCTLCGKNFRQKAALKTHLLNHTKIKPFKCDQCERAFASQKDLTSHSLIHSCERPFNCEVCNRSFVSEKTLKYHRARHTRGYPFGCDICEMRFCYMHLLRRHMLTHTGEKPYKCKYCGKGFRQRHESVVHMQTHPEANDDKDKPSLQQVLELINSLPREGDMCESKDQPIVNANEINSNQSIEFSSSFCNINQPTSYDQEQPHVSTEIEKNVHNEDLKTNLDFSAIKVKPEPMEFLKKFICKCCGARFALQNTLSHHVRQNKCSQKHFTCPNPKCKRVFASQEKLDAHILTHTYCDLCGQSFSSSEEIETHKAEQHNLKIKHPCPHPTCNKAFYKGGQLEKHIETHNIKKEFQCTLCDKSFHRKFYLTQHMNRHTKTRPFQCEQCSKAFYSSGELQRHIMRHTGDRPFPCDMCEKTYPLASELRVHKQSHSGERPFACEFCPMRFGFANVLRKHLITHTGERSFKCNICGRGFVHRQNCEDHMKTHSGEKEYGCEICDSRYYTKDSLRKHMRKNHKNIPLTEDSVTESMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01318424;
90% Identity: iTF_00974972;
80% Identity: -