Basic Information

Gene Symbol
-
Assembly
GCA_951394125.1
Location
CATOAT010000050.1:371734-374152[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.2e-05 0.0081 17.4 0.0 18 85 17 74 7 76 0.73
2 6 0.0006 0.42 11.9 0.0 6 86 106 172 102 173 0.67
3 6 0.00024 0.17 13.2 0.0 6 85 199 264 194 266 0.64
4 6 0.00086 0.61 11.4 0.0 21 86 287 343 273 344 0.64
5 6 0.002 1.4 10.2 0.0 33 84 386 429 362 431 0.72
6 6 0.042 29 6.0 0.3 6 76 452 508 449 518 0.66

Sequence Information

Coding Sequence
ATGCCCGTCAGTAGCAAGTGTGTTGTTTGCGGTGATACTGTATTGCCAATGCAATGCATTCCGTTTCCAAGAAAGGAAAAGCGAGAGGCTTATCGAACTGCCCTGGGTATTGGTCCGGATAAGGCCACGCATACACGGTCGCGTTTATGTTTAAAGCATTTTGAAATCGAAGATATCGACCCTAAAACGCGAGCTTTAGTGAGACCAAATGCGTTGCCTAAGATGAAACCGGAATATCCGTACATTGTAGAATCTCCAAAAGTCAAGGATATGTTAAAACGAAAGAAAACCTTCGGCAAACGCAAGTGTATTGCTTGTCGAAATGAGATCAAAACCCCGTTTTACATTCATTTTGCTCGAGGTGAAAAGCGTAAGCGATACAAGAAGGCCTTAGGCTTAGGCGACGATGTCAGCATCCATTCAAGGACGAAACTTTGTTTAAAACACTTTGAACAGGGCGCAGTTCGCGCAGATGGTAGACGGTTTGTCATTGCTGTTGACGCACTTCCGAGCATGAATTGTACAAATCCGTATACACCGCCTCCAGAGGTCATCGAAAGTATGACTCCGCTCAAACCCCGAAATTgccatttttgcaaaaaaagagcGAAACCTTCAATAAGCTTGCCGTTTCCGTCCGGAGAACGTGGCAGACGGTATCTCCAGGCTCTTGGTATTAGCCGTCGAAAGTCTGTGGATCCAGATGCAAGGCTTTGTcttaaacattttgaagaagGTGATGTCAAAGTGACCGTAGACGAGTTCATTGTGGACGACGATGCCCTTCCAAAGATTCCCCAAGACACGGATGCTCTTCAATGTATTCTGTATTGTAGCCACGTCTATCCTGAATACAGTATCGCTTTCCCCACTTGCGAACTCGGCCAGAAGTATAAGAAAGCTCTTAACATCACCACCGACCTCCCGGTTGACCCAAATTTAGTCCTCTGTCTGAAGCATTTCGAAGAAAGCGATGTCAAATCAGATTCGTGGCCATTAACCGTTAAAGCCGATGCGCTTCCGAAGCTTGAACCCGTCCAGCCTTTTACGGGTCATGATAGCCGAAAGCTACGACCCTCAAAATGTGTCTATTGTAAAGTCCTTGTCAGCCCTCTGCTCAGCACAACCTTCGCTCGTGGCCCTAAAGGGGTAAAGTTTCGTCGAATTCTTGGAATGGGTCAATTCACGCCTACTCACACTCGATCGCGGCTTTGTTTGAAGCATTTTGATCCCATGGACATAAAAATTGAGGATTACAAGTTTTCCCTTCGAGTGGATGCCCTTCCAAAACATCCGGTTCATCCGATAAAAGCGAAAAAGCcgCGCCGTCAAGTTCGTTTAAAATGTATTGCGTGCGGTCAAAAAGCCACCGATGGCAACAGTGTTTCTTTTCCCAGGGGCAAGCGATGTGAGCCGTTTAGAAAAATTCTTGGCATATCAGAAAACGTCATCATTCATTCCCGGACGCGGATCTGCTGGAGACATTGGGACAGCAAATGTGTTCGGATCGAAAACGGTAAATGCATTGTGCCTCGAGGGGCGTATCCAATCAGTACGATTTCCGATGGCGCGGCGGCCATCAAGATTTTGAAACCAGTAAATGTCAAGCCTCCGCCCAGAGAGCCAACCCCTGTCAACGTTCTTGTACCCCAAGTGAATTCAGATTCAGAAAAAGATACGCCACCAATAACAGCCCGACCTCCGTCAATTAGAATTTTAAAGCCTGTTGTAAGTTTTAAAGCCATATATATTTCGTTATATGCCTGTTTCCAGCATCTCCGCCCTAAATTTGAAACCGATACTTCCACACCAATTCCAACCGCCACGGTTCGCATCTTACAACCTGTCAAACGACCGCCGCCGCCGACTGCATCCAATGCCGACGATGATAAAACTATCAACgaagtctcaacaaaaaaatcatgcaGTGCTCTATCAACAGAAGTACCTGTTAAGCTAGAGGACacccaaaaacttcaaaataaatctACGACTGCCGTTGACGCTTCTGTTTCTTCATCATCTTCGCTTCAATTATCGAAGCTGCCCCAGCTAGACTCAAACTCAAACCCAGCTGCTAGGGCTTCATCAACTCCAATCGATTTCGATACTCATTGA
Protein Sequence
MPVSSKCVVCGDTVLPMQCIPFPRKEKREAYRTALGIGPDKATHTRSRLCLKHFEIEDIDPKTRALVRPNALPKMKPEYPYIVESPKVKDMLKRKKTFGKRKCIACRNEIKTPFYIHFARGEKRKRYKKALGLGDDVSIHSRTKLCLKHFEQGAVRADGRRFVIAVDALPSMNCTNPYTPPPEVIESMTPLKPRNCHFCKKRAKPSISLPFPSGERGRRYLQALGISRRKSVDPDARLCLKHFEEGDVKVTVDEFIVDDDALPKIPQDTDALQCILYCSHVYPEYSIAFPTCELGQKYKKALNITTDLPVDPNLVLCLKHFEESDVKSDSWPLTVKADALPKLEPVQPFTGHDSRKLRPSKCVYCKVLVSPLLSTTFARGPKGVKFRRILGMGQFTPTHTRSRLCLKHFDPMDIKIEDYKFSLRVDALPKHPVHPIKAKKPRRQVRLKCIACGQKATDGNSVSFPRGKRCEPFRKILGISENVIIHSRTRICWRHWDSKCVRIENGKCIVPRGAYPISTISDGAAAIKILKPVNVKPPPREPTPVNVLVPQVNSDSEKDTPPITARPPSIRILKPVVSFKAIYISLYACFQHLRPKFETDTSTPIPTATVRILQPVKRPPPPTASNADDDKTINEVSTKKSCSALSTEVPVKLEDTQKLQNKSTTAVDASVSSSSSLQLSKLPQLDSNSNPAARASSTPIDFDTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-