Basic Information

Gene Symbol
Znf541
Assembly
GCA_951394125.1
Location
OX596028.1:5166069-5178288[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4 6.3e+03 -2.1 0.0 7 31 1434 1458 1433 1461 0.83
2 2 5.8e-08 8.4e-05 23.1 0.1 3 45 1467 1509 1465 1510 0.94

Sequence Information

Coding Sequence
ATGTGTAGTGCCTCTATGGGTGCAGAAGGATCAGTTACATTGCAATTAAGAGAAGCTATTCATTCGTCAGATTCCTCATCGGTCGATGGTTATTCATCTCTAGACAATGCCCTCACAATTGGTTATCCCGATCCGGACATGCTAGCCGATGTTCTAGGTTCGCTACAAACGGCCTCCCTTAACAATAACTCAAATAGTAATAACACAATGATTAGTGCCATTACTTTGGAGAATTTGGATGGTAGCAAACTCAATGATATCAGTTCAGCAATCAGCAGCACcccaaacaataataacaataacaatggTGGCAGGAGCAatagcagcagcaacagcaacaacaacagtaaGACCTTCAACAATAACAGCCTTATTAGCTGTAGCAGTAATATATCGCTGAACAGTCCGATTAGTGGGCAAATAATCAGCATTACCGGTAGTAGTAGTGGAAGCAGTGGCAGTAGCAGTAATTGTAGTACAACCAGTAATAGCAGTTGTAGTAGTAGCAGTAATGAGAGTATATCAAATGTATCAGTTCCTGGATCTAATCCACCGATTGTAAAGAAACAAAGACCCAAAACATCATCCCCCACACGACATGGACCTCAACAATGTCAgGTTTGCAGTAAAGTATTCGGAAATGCATCTGCCTTGGCCAAGCACAAATTAACGCATAGCGATGAGAGAAAGTATGTCTGTGTGATGTGTTCAAAAGCGTTCAAAAGACAGGACCATTTgaATGGTCATATGATGACTCATAGAAATAAGAAACCATATGAATGCAAGGCTGAAGGTTGTGGCAAATCTTACTGTGACGCAAGATCGTTGAGACGACACACCGAGAATCACCATAGTGGACTAGCAGCGGCTGCAACAACTCCTCAGAATCAATCATCATCCCTGTCGCCGTCAACAGGACCACCGACAGGGCTTAGTTTGTCACCAGCAACTGCCAGTGgaGACGCAAGTTCACCCCACGGAGCAAATTGTATTCAGTACACAACTATGGGAGGTGGCGACGATGGTAGTGGCAGCAATAGCAATAGCTCAGTTAAACAATCCTCATCAGCTGTGAATGTGTCGGTTGTGTCATCTTCGACACAAGCCAGCTCCTCTTCACAATGCTTTTCAGTGACGTCTTCACCTGCTTCTTCACCTTCGTCAAATGCTTCAATAAAATCGGTTGTTTCTGGTGATGGACTTACCAGGCAGCAACTAGATCTCATTAGCCAAATTATGCAGCAAACCAAGCAGGGTAATACGCAATTGACTGTCGGATCAACGACTgcgaatttgaaaataactaaTCAACCACCGTCACCCCATCAAAACCAGGCCCAAAGTAATCAGCATCAGCTGCAAAGACCACGGACATGGAATATGCAGACCCAATTGCAGCAGACACAATCAAAAGTATCGGTAATAGAAAATTCCACATCACCAATGACATCCATCTCCATAAATGAATTACTCAACGGAAGTGGTCCccatcagcagcagcaacaacagcagcagcatcaacaacaacaacagcaacaacaacaacaaaatctatCAAGTGCTGCCgcattaaatcaacaaattttaaatattgtaaaaatagaacaaaaaccTGTAGAGTGCAATCTATGTCATAGAAAATTTAAGAACGTTCCAGCCCTCAACGGACACATGCGTCTGCATGGTGGTTACTTTAAGAAAGAAGCAGAAACAAAGAAATGCGATCGAAAAGACGGCCTTGGTGGGCCACCTCTTCAAACGGCAAGTATTGGGGTGAGAGCTTTGATTGAAGAGAAAATTATAAGTAAGCGATGTAAGGATTTGAAGGGTGCCTTTGTAGTTCCTGCCCCACCCATAACAGCTGCTATTAGACGAACAGCAAGTGACCTGGAAAATTTTTTAACCCCCAAATCACCTATAGTACTTCAATCAGGAAGCTCTCCATCCGAGAGGAACAACAGTCTACCAGATATCGGTAATGCTGTACTTCCATCGGGTCTGCAAATCCAAAAGCAACCAATACCAGTCCCCCATCAGAAACCATCAAATGTCAGTGTCGGAACGGCAACTGTATCAACCAACACCTCCAAAGCTACGTCCACCATGGATCACAAAGACGCAACTTTAATCGAGTTGCTAAAGCGTGGTACAAAAGTTGCAGTGAGAAAAACATCGAATTCTGATTCCAGCCAGATATTCACCACTAGCAGTGGGACCCTTATGCTGCCCTCTGAATTGTCACTTTCCACCAACTCGGGCACATCTAACCCACCACTAGCAATAACACTTCCAAATGGAGAAACCACTCCCGTCTCACTCACCATATCCCAGGCCTCCAACGGATCGGGTGACGTTTACACGCTTACCTATTCCACAGATTCAGCAGCGTCCTTTTTTGAGGACAGCGATGTCTACAGTGTATCGGAGACCGATATGCTTCTACAAACAGTCGATTCGATACAGTTGCTCAACGAATCGGAAGAAACGGATCACTTAGATGAAATAAATTCACTTGGTGACTTCCACAATGATACCAGCAGCTCTTCCTCTAACCTTGTGGTAAATAGAAATAGCAGCAAGGATATGCAAACGGTGTTCAGTTCCCCATTGCAAGATGCATTGCCCGACTTTCAAACTCTTCATTCCAAGGATTTTGTCCTGTACAACAATGGCACATGTAAGGCTATCAATAGTGGCGGCAATCACACCACCGCAACTAAGACACTGGCCACTGTGATTAAACAGTCAATATCTCCACTTCCCTCACCGCTGGCATATCCCACCCCACCAGCAAGCCACGAGACGGTAGCACAAGCTTCGCCATTCCTGGATGATTCCCACCACTTTTCGGATGCAGCGAACTCCTTCTTCCAGGAGAAATCCACATCTGACTTTATTGATGATGCCGGTGGAACTTTCTTCAAAGACTGTTCCAACGATGCACTCACCGAAAGTCAAAAAATCCTCAAACTCAAAAGTGTCCTCGAGGACAGTGGACAATTCTTTAAGTCTGGCGATGATAATTCGAACGATGTATTCGACAGCTCTGTGGTAAAGGTGGAAGACCTGCTAAACGAATCCAGCGATGGGGCAAACTGTGATCTCAAAGACTTTGCCGAGCAAAATCTGGCCTTTTTGGAAGATGCTCAAGGATTCCTCGATGATTCTCGCAATGCCACTTCTCCGCTGTCGGAGTCCTTCTTCACAAGCGGAATCGGCACGGCTGAAGAAGTCAAAGAGGTCCTGCGTGATGTTCTTCCCGATGAATCTCTGAATTGTGACCCGCAAAATTCAACCGATATCGACCTTTACTACTTGCCAGGGCTAGGTCTTCAATCCCAAATGATGCCAAACTCCGAAGATCCTTTGTTGTCATCTTCACCCAGAGATTTTGGCCACAGATTGAGTGTTCAACCACATCATCAGCAAACGCAAATGATTCGCATAGAACCGCAAGCATCAACGATGCAGGGGCAATTGCTCTCAAAGAAACCAGACCCAGATCCAAGTTTTCCCTTATTGATGGCCACAAGTACGTCCAGGGATGGAAGCACTGAATTCCATTTCACTATTCAGCAGCAGGAAATTAAGCAAGACAACGAAACAGATATCAAGCCAGATATAGCATCAGGCCAGATGTGTGTGGACAATCAGCTGGCAGCACCACAACTGCCACCCCCACCGTTTAAAGATACATCCGCTCCCATTAAGACTCCACAATTCTTCGGAGTAAATGAAATCCCTGCACAACAAATTCACCAGCAACCGCAAAACATTCTAGCGGCAGCTGCTACAGCTTCACCTTTGACAAGTTCAATTTTGAAAAGGAGATTGCGTCAAGGATCCATGTGTGGCGACAGTAGCACCACACACCCAACTAGTATTCCTCGTAAATATGAGCTTTACAAGTCAAAACTACGAAAACCATCAACCACTCACTACACTCCCCAGCCAATCCTTAATCCCGGCAGAAAGGGTACCGGTTTGTATTCCAATCTACCCAAACCACCCACCTTTGCCCAGGATGCCTTGCATTTGGATGATGAATTCGAAGAGGCTGCCAGTATCATGGCTTTCCTAGATGAATCCAAAGTCAACATCGGTACAGCATATCAAGCAACTATTCCAGctctagaaacaacaacaaatgagcTGCACCCCATGATTGTTGGTGGAAAACCATCGGAAGTTACAGAACATGAGGAAATGATGTGGGATCCAAGTGTAGCAACAGATGAGAAGATACTAACGAGATACATTGAGCTGAGCAAATCTTCAGCCATTCCACTTGGTTATCATTCGGAAGAAGTTGCCCTCAAAGCATTGCTTCAAGTCCATGGTGATACACCAATAGCTGTATTGAATCTTCTCAAATCGCAATCAAATCCTTTCCAATTAAAATGGTCGTCGCTAGAAGTCGAAATGTTCCTCAGGGGTCTGGAAAAATATGGAAAGGACTTCTATAGCATCTCAAGAGAGATTATAACCAAGTCCACAAGTGAATGCATCCAACTCTATTACTTCTGGAAAAAGTTATGTGTGGACTACAAGATGACTCATCTAAAGGTAGAAAATGACGATGCCTCCCAATCGCAATTCTCTTCGCAAGTTGCTGAGCACCGCCCTCATGTTTGTGAAATGCCAGATTGCTCAGCTagCTTTACATCTAAAGCTGCTTTACATGGGCACACTCGGATCCATTGTATTGGGCGTAATATGAATCAACTCAACAATAACAACAGTGCAATGATACTGACCAACAATGGCCAGTTGCAGTCTCATTCAAATCTTAAAGATGACTTCCCCTGCAAGGTGTGCGGCAAagttTTCAACAAAGTCAAAAGCAGAAGTGCTCATATGAAATCGCATCGTCCTCAGGAAAATGATCCAAATACCAATAGTCTCccacagcagcagcaacagcagcctCAGCATCtgcaaccacaacaacaacaaccacagtctcaacaaaatacaaattcattataa
Protein Sequence
MCSASMGAEGSVTLQLREAIHSSDSSSVDGYSSLDNALTIGYPDPDMLADVLGSLQTASLNNNSNSNNTMISAITLENLDGSKLNDISSAISSTPNNNNNNNGGRSNSSSNSNNNSKTFNNNSLISCSSNISLNSPISGQIISITGSSSGSSGSSSNCSTTSNSSCSSSSNESISNVSVPGSNPPIVKKQRPKTSSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCVMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGLAAAATTPQNQSSSLSPSTGPPTGLSLSPATASGDASSPHGANCIQYTTMGGGDDGSGSNSNSSVKQSSSAVNVSVVSSSTQASSSSQCFSVTSSPASSPSSNASIKSVVSGDGLTRQQLDLISQIMQQTKQGNTQLTVGSTTANLKITNQPPSPHQNQAQSNQHQLQRPRTWNMQTQLQQTQSKVSVIENSTSPMTSISINELLNGSGPHQQQQQQQQHQQQQQQQQQQNLSSAAALNQQILNIVKIEQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKEAETKKCDRKDGLGGPPLQTASIGVRALIEEKIISKRCKDLKGAFVVPAPPITAAIRRTASDLENFLTPKSPIVLQSGSSPSERNNSLPDIGNAVLPSGLQIQKQPIPVPHQKPSNVSVGTATVSTNTSKATSTMDHKDATLIELLKRGTKVAVRKTSNSDSSQIFTTSSGTLMLPSELSLSTNSGTSNPPLAITLPNGETTPVSLTISQASNGSGDVYTLTYSTDSAASFFEDSDVYSVSETDMLLQTVDSIQLLNESEETDHLDEINSLGDFHNDTSSSSSNLVVNRNSSKDMQTVFSSPLQDALPDFQTLHSKDFVLYNNGTCKAINSGGNHTTATKTLATVIKQSISPLPSPLAYPTPPASHETVAQASPFLDDSHHFSDAANSFFQEKSTSDFIDDAGGTFFKDCSNDALTESQKILKLKSVLEDSGQFFKSGDDNSNDVFDSSVVKVEDLLNESSDGANCDLKDFAEQNLAFLEDAQGFLDDSRNATSPLSESFFTSGIGTAEEVKEVLRDVLPDESLNCDPQNSTDIDLYYLPGLGLQSQMMPNSEDPLLSSSPRDFGHRLSVQPHHQQTQMIRIEPQASTMQGQLLSKKPDPDPSFPLLMATSTSRDGSTEFHFTIQQQEIKQDNETDIKPDIASGQMCVDNQLAAPQLPPPPFKDTSAPIKTPQFFGVNEIPAQQIHQQPQNILAAAATASPLTSSILKRRLRQGSMCGDSSTTHPTSIPRKYELYKSKLRKPSTTHYTPQPILNPGRKGTGLYSNLPKPPTFAQDALHLDDEFEEAASIMAFLDESKVNIGTAYQATIPALETTTNELHPMIVGGKPSEVTEHEEMMWDPSVATDEKILTRYIELSKSSAIPLGYHSEEVALKALLQVHGDTPIAVLNLLKSQSNPFQLKWSSLEVEMFLRGLEKYGKDFYSISREIITKSTSECIQLYYFWKKLCVDYKMTHLKVENDDASQSQFSSQVAEHRPHVCEMPDCSASFTSKAALHGHTRIHCIGRNMNQLNNNNSAMILTNNGQLQSHSNLKDDFPCKVCGKVFNKVKSRSAHMKSHRPQENDPNTNSLPQQQQQQPQHLQPQQQQPQSQQNTNSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01522200;
90% Identity
iTF_00334984;
80% Identity
iTF_00664377;