Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_951394125.1
Location
OX596028.1:71719282-71723820[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.24 3.5e+02 1.9 0.1 22 46 237 267 225 267 0.73
2 5 1.2e-11 1.8e-08 34.9 0.0 1 45 273 318 273 319 0.96
3 5 8e-14 1.2e-10 41.9 0.6 2 43 329 374 328 376 0.95
4 5 5.5e-08 7.9e-05 23.2 0.0 4 44 386 427 383 429 0.90
5 5 6.8e-13 9.8e-10 38.9 0.1 3 44 437 479 435 481 0.95

Sequence Information

Coding Sequence
ATGGaatcacaaaagaaaaaatcgaaGTTATCAgctaaaaaaagtaaaatccaaAGCGATACATCTGAAAGTGAATACAATTTCAGTGAGGGTGATGATGAGGACGAGGACGACGATGAAGAAACCTCCGAAGACGAGGAAAATGTTATTAGCTCCGACAGCGACGAAGAATTGCTCTCGGAGGAATTGGATTTCAATTGCATGGCTGATGTTGTTAAGCTATTAGAAGATCATGCTGATGTTAATATGGAAAATTCGATTGTCCTTAATCGCAAGCTACAAGAGACATTGGAAGAATTACGAACTAAAATTGTTTCAATGATCAACAAGTGTCGCGAAATTTACGAAGAGAATCAACAAAAGCTCGCCAATCCCTCGACCATAACATCCAATTTAAAAGGAATTGGAAATTGTGGAAGACCGTTTTTTAAGGACAAATCAGGGAGATCTTGCCCGCCAAATGCCGATTACATACATCGCAGTGAGGTCGAAAAGGAATTCTTTCCTAGTGACTTAGAGCTGTATCCACATTTCACTTGGACAGCCAGAGATAAAGTCGGAATACTACAGGGAATCAAAGAACAGgcTATTGAGTATATAGAACGGAAAGATTCTTACACACAAAAACTTCCCAAATCTACACCTTTAAGCAAAAAAGTTAAACTACACTCACTCAAACTCAACAAACTGCTCGATAAAGTCGATAATGATTTTGAAATCGACTGGAATCAAATATCGGTATACAACTTAGGTTCCCGTCATACGGCAAATAGTTGTTTGGCCAGTTGGAATGCTTATCTTAAGCCAAAAATCAATCGTGATGAATGGACAACCGAAGAAAATGTTAAACTAAATGAACTTGCAAAGAAATATCAATTTCAGGATTGGATTGGAATAGCTTCAGAAATGCCAGGCAGATCAGATTATCAGTGCTTTGTTCATTATCAAACTGTAGTTTCGATACAAATGCGAGAGGATAAAGGTGAACGCTGGACTAAAGAAGAAGATGATTTGTTATTGTCACTgatagaaaaaaatcgaatgggCAATGTTATAAGATGGAATCCTATATGTTCACAATTGCCAAATCGAACGAAAAAGCAGTGCTTTGCTCGTTGGAAATATAGTATTAATCCAAACATTTCAAGAGcttTATTTACTCCCCAAGATGATTGTATCATACTAGCGGCTGTCGAAGAATTTggcgaaaattttaattgtttcccCAAAGATCTTTTTCCAGATCGAACTGTCGTTCAAATTCGCAACAGATACAATAACTCGATAAAACCTCGTGAAACAACCCGCCATTGGTCACCAGAGGATGATCGATTACTTTTAAATCTCATAGCAAAATACGGCGAGCATGATTGGAAAAATATATCTGCTTCAATAAAAAGTCACACTCGAACCGGTTGTCGAACTCGTTATTTAACTATAgctaaatttttcaaagaaaatcccGATGCAACCATTGAAGATAttcctagaaaaaaaagaaaaccacgATCGAatgtaactaaaaataattgggTAAAAACAATAACTGGTGGTGGAGAGGAAAGTGAAATCGAAGAACCCAACGAACAAAAGGAACTATACCGTTCTAAACTGCGCAATAACGAATTACAatggtataattttttaaaatactcatATGATTTCAAATTTGGCGAAGGCTATAGCAAAGTACCTAAATGCTTGGCAAGTTTGGAATTCGTTCGGTAtgtttttgaatgcaaattgAATATGCCAGTTATTCTCCGTGGGGGCTATGCCACAGGATTTGTTGCTGTGAGTTTGACGAAACTTATACGACTTCATGAACAAGATGAGAAATCATTGGTATTCGAGAGACCTGATGTGGGTTATCGCATGCCACCAAGTTATTGCTCTCTATTGGCTTTTCGAGGACTTTGCATACAGGCTTCATTTAATAGTAACCAAGATAAAGTTGAGACAAACACAAAACAACTGCCTGCCAATGTTGTTGAAGCGAGAAATAAATTTCGTCAGCGACTTATCAGCCTGCTTTATAAAACAACACTTCTTAGTCGACTAGAGCCTAAGACGTCCGTAGAGCATAATACATTCGAAGTGATTTTCGATCCAAGCACTCAGTTGGGTCAGGTCGCCGGTATAAATTTGGCCGAACTCAAGGTTGCTCAGATGAATAAAATCGCTGAAAATCTACGAATTGTTCAAGAAAAAGCAGACAAAAACCGAAAtaaaaaaacaataaccatGACTGAACTGTTAAATATTGTTAAGCGAACAACAAGTGAACAAGAACGAAAGGAAAAAGCGAATTTAATAAACGTCGTTGACAGTTCTTGTCATTCGAAATCAATCGAACATCCAAAACAGATTTTAAACGAATCAGAAAATGCTGCCCAATCAAAGACAATAGAACAAgctaatgattttttaatagaagAATCATCTGTTAATGAAACAGCAGAAGTTATGGATCCAATCACGGAAACCAAGCAATTTCCCAAGTATAAAACTTTTGCTACACAAAAAGCAAATACAAAACGAAAGTTTGAGGAGAGTTTAATAATTTTGGAAGACTCATCTCATTTGCCAACATTTGAATCAAGTTGCGAGGTAAAGAGGATTAAACacgaaaaagaataa
Protein Sequence
MESQKKKSKLSAKKSKIQSDTSESEYNFSEGDDEDEDDDEETSEDEENVISSDSDEELLSEELDFNCMADVVKLLEDHADVNMENSIVLNRKLQETLEELRTKIVSMINKCREIYEENQQKLANPSTITSNLKGIGNCGRPFFKDKSGRSCPPNADYIHRSEVEKEFFPSDLELYPHFTWTARDKVGILQGIKEQAIEYIERKDSYTQKLPKSTPLSKKVKLHSLKLNKLLDKVDNDFEIDWNQISVYNLGSRHTANSCLASWNAYLKPKINRDEWTTEENVKLNELAKKYQFQDWIGIASEMPGRSDYQCFVHYQTVVSIQMREDKGERWTKEEDDLLLSLIEKNRMGNVIRWNPICSQLPNRTKKQCFARWKYSINPNISRALFTPQDDCIILAAVEEFGENFNCFPKDLFPDRTVVQIRNRYNNSIKPRETTRHWSPEDDRLLLNLIAKYGEHDWKNISASIKSHTRTGCRTRYLTIAKFFKENPDATIEDIPRKKRKPRSNVTKNNWVKTITGGGEESEIEEPNEQKELYRSKLRNNELQWYNFLKYSYDFKFGEGYSKVPKCLASLEFVRYVFECKLNMPVILRGGYATGFVAVSLTKLIRLHEQDEKSLVFERPDVGYRMPPSYCSLLAFRGLCIQASFNSNQDKVETNTKQLPANVVEARNKFRQRLISLLYKTTLLSRLEPKTSVEHNTFEVIFDPSTQLGQVAGINLAELKVAQMNKIAENLRIVQEKADKNRNKKTITMTELLNIVKRTTSEQERKEKANLINVVDSSCHSKSIEHPKQILNESENAAQSKTIEQANDFLIEESSVNETAEVMDPITETKQFPKYKTFATQKANTKRKFEESLIILEDSSHLPTFESSCEVKRIKHEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00893815;
90% Identity
-
80% Identity
-