Eeli019838.1
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- -
- Assembly
- GCA_951394125.1
- Location
- OX596031.1:6621741-6625241[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5 6.9e+03 -2.6 0.1 14 25 260 271 256 271 0.76 2 2 1e-09 1.4e-06 28.4 0.0 3 33 279 309 277 309 0.96
Sequence Information
- Coding Sequence
- ATGGGTAACCCAATGTCGCCTCTTATAGCGGAgatatttatgtcaaaatttgaaatgaatttgaaacaaaatggaTTGCTACCACGAATATGGTACAGATATGTTGATGACGTCTTTGCTATTgtgaaaatttctgaaattacaAAGATTTTTGATGCAATTAATTCGCAGTTTGATACCATAAATTTCACAATGGAACAggaaaaaaacaaccaactaCCCTTTTTGGACCTGATGTTAAAAAAGACTGGAAAGAAGATAGTTTTTTCAATATATCGGAAACCAACAACCACGAACCGATATATAACCAGCGATTCACACTGCCCGATACAACATAAGTTAGCTGCTTTCCACTCCATGGTACACCGTTTGTGCAAGCTTCCACTTTCTACCACAAACTTCCGCACTGAATATCAATACCTCAAAGATGTAGCTAAAATCAATGGTTACAGTGACTTAATAATTGACAAACTTATAAAAAAGcatatgcaaaaaataaaaaaatccgaaCTCTCAACGCTCTTCTCAcaacataaaaagttatttaataacAACACCAGTGTACGTAATTCAATGACATATGCCCCTTTTATCACGAATaaactacaacaaaaattaaaacattgtgATATCGACGTTGTGTTCTctaacaacacaaaaattaaaaacttattaggCTCCTCTAAAGACAAGACGAATCCCTTTGAAATGTCTGGAATTTACCAATACGAGTGCAGTGaatgtgaacaaaaatatataggaCAAACTATTCGGAGTGTTAAAaaaattagtCAAGAAACTGCTGCACAAAAATCAAAAGACCTTTCGCGATCTGAAAGAATTGAACTTGCTCTGATAGATATAAGGGAAAACACATTAAGCCATAGAAAAGCGGCTTCGAAATACAACGTACCAAGAAGTACCTTGTAG
- Protein Sequence
- MGNPMSPLIAEIFMSKFEMNLKQNGLLPRIWYRYVDDVFAIVKISEITKIFDAINSQFDTINFTMEQEKNNQLPFLDLMLKKTGKKIVFSIYRKPTTTNRYITSDSHCPIQHKLAAFHSMVHRLCKLPLSTTNFRTEYQYLKDVAKINGYSDLIIDKLIKKHMQKIKKSELSTLFSQHKKLFNNNTSVRNSMTYAPFITNKLQQKLKHCDIDVVFSNNTKIKNLLGSSKDKTNPFEMSGIYQYECSECEQKYIGQTIRSVKKISQETAAQKSKDLSRSERIELALIDIRENTLSHRKAASKYNVPRSTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -