Eeli011159.1
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- -
- Assembly
- GCA_951394125.1
- Location
- OX596029.1:73992615-73993730[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.4e-11 7.4e-08 32.5 0.0 4 44 107 148 105 149 0.92 2 3 2 2.8e+03 -1.3 0.0 23 37 173 187 166 192 0.72 3 3 7.6e-12 1e-08 35.2 0.1 5 39 218 252 215 257 0.92
Sequence Information
- Coding Sequence
- ATGTCACCTAAACAATTGGATGAACCGTGTCCACCAGTAATGAAAGTTTGTTCAGGAAATGATGAGTACATtatatatgaattaaaaagtGATACTCAACCGATGTATAGCTACGTCATAACAAATCCCAAAGAACCACCACCTGACTGCGCAAATTCAAAAGAAGACACAACTACTGATAGGATCGTTTCGAGTGTTACCGAAGTATTAGCAAATCCAGGACCATACACAATAAGTGTCGAAATACCAGTTGAAAATTATCAAACAGAAAATAGTAAGGAGAATTCACCAAAAACAAAACGTGCTTTGGCTCGAAAAAGACTCGCCGAAGCTGTTATTGCTGTAGTCAATAAAGAATTCACCATTGGTAAAGCGGCAAAAGCTTTTGAAGTGACGAAGAGTACGCTATGGAAAGAAGTTAATAAACACACTAACCATCGAAAAAAGAAAGTTGACGAAGATCTCAATAAGAAGATCGCTGATCGTATTTGTGCAGGTGAATCTTTATCAGAGATTTCAAGATCCTTAAATGTGGCAAAATCCACAATACACCTGCATAAAGTTCGACTAGCACAAGCTAGACAGCTTCCACCTAGTGTAAGCTTAAAACCGCCTGTAGATAAAATGGAACAAATTGCTATCAAGAATCGTATCATTCGGGCTTTCCGAGCCATTCGAGTAAATGGGATGTCTTTGCGTTTAGCATCAACGTATTTCTCAGTGCCAAGGTCGACGCTGTGGAAACACATACGACGTTTTAAAGCTTCTCAAAAGGAACAAACAAAAGATGCCCAACACGGCCATGAATCTGAAAACGCTTTGAAAGATGGAGTGAATGAAAATAGTTCAGAGGAAATTTCTAGTGAAGAAGAGGATAGTGCAGAAGATGGAGACAACAATCTACATGaatcagaaaatgaaaatgttccTCAAATAGATGAAAATACTTCCGATGTACAATCTACCACAACTGAAGGTGATAATGAAGATGACTTTAATTTACTCAATGCCTATTGTGCGCAACACATAAATGATCCAAGTGAAGAAGGAgacttttttataagttttgacTTTGAGACTTTCGAGGAGTATGTAAAGACAGAACTCGAGAATTGA
- Protein Sequence
- MSPKQLDEPCPPVMKVCSGNDEYIIYELKSDTQPMYSYVITNPKEPPPDCANSKEDTTTDRIVSSVTEVLANPGPYTISVEIPVENYQTENSKENSPKTKRALARKRLAEAVIAVVNKEFTIGKAAKAFEVTKSTLWKEVNKHTNHRKKKVDEDLNKKIADRICAGESLSEISRSLNVAKSTIHLHKVRLAQARQLPPSVSLKPPVDKMEQIAIKNRIIRAFRAIRVNGMSLRLASTYFSVPRSTLWKHIRRFKASQKEQTKDAQHGHESENALKDGVNENSSEEISSEEEDSAEDGDNNLHESENENVPQIDENTSDVQSTTTEGDNEDDFNLLNAYCAQHINDPSEEGDFFISFDFETFEEYVKTELEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -