Basic Information

Gene Symbol
kn
Assembly
GCA_951394125.1
Location
OX596030.1:55012137-55015036[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-16 2.9e-12 46.2 0.2 130 162 503 535 491 540 0.90

Sequence Information

Coding Sequence
ATGTCAAGAGGTATATCGTTCCTAAATGCTTCATACAAGATATTTACGCTAATACTGCACAAAAGATTCAACGAATGGATTGATGGCAACAAACTACTGAAGGAGTACCAGGCAGGATTTAGAAGTGGATATTCAACGATAGATCATATTTTTACCCTTAGATGTATGGCAGAAACATTCCTTCGTAAGGAAAAGAAGTTATATGCCTTTTTCGTAGATTTTAGAGCTGCTTTCGATATGATCGATAGAAAGGCGCTATTTTATAAGCTTTATAATAAAGGCATGTCATGGAAGTTTGGAAGAGTCATACAGAATCTCTACGACGACACAACAAGTAAAGTATGGAATGGTGAAGCGCTTTCGGAAGTATTTAAAACACAATCGGGAGTCAGGCAAGGTTGTACATTGAGCCCAAGCATGTTTGCCATGTTCATTGATGATCTGGTAGACATTCTGCCATGTGGAGTAGAGTACGCggggaaaataataaaactattgaTGTTTGCGGACGATATTGTTCTGTTGGCAGCCTCTGCTGAATCTTTGCAGTTGATGATTAACCGATTATTCGAATGTCGGGTTTGGAATCTGATAGTTAACCTTGACAAATCCAaggttttaatattcaaaagtgGAAGAGGCCGCAAATGTGCACACGAAAAATGGCATTATAATGGAGAAAATATCGAAGTTGTAACGGAATTTAAATATCTAGGAGTTATTTTCACGCAAAATCTGAGTATGGAAAAACATCTGAAGGAAAAATTAATGAAGGCAAAATGCGCAATCAGCGCAACATGGAATAGATGCTTTCATAACAAAAGTATAGCACACAGcagtaaattcaaattatttgaagcGATATCAGCATCGATCCTTTTCTACGCAGCTCAGACATGGGGTACAAAGCAGTACGATACGGTGGAAAAACTTCTACGATACTTCTGCAAAAGAATCTTCCAGCTTCCACGTAGCACACCTAACTACGTTATCATGTTAGAAACAGGAATCTCGCCATTGTTCATTCGAACATTAAAAATGCAAGTTGACTATGTAACGAAAGTCTTAAAGATGGATGATAATCGACTACCAAAAATAGTAGCTCTTGAAGTCATAAGGACAAAGACAAGTTGGTGTGCTGATTGGTTGGAACTTGCTTCAGAATGTGGGATAAACTTGAACCTGGAAAGTGAAGAACTAGAAACTTCGCTTTATCAACTCATTGCTGCAGTGGACTTAAAACATCGagataaatatttgaatgacGCAACGGGATCTATCTACAGACAACTATACAGCCAATTGAATCATAACCTGGgggagaaaaattattttagggaTGACAACAGTACAGCCGAGATTTCAATGATGGTAAAACTGCGGGGCGAACTTATGCCATTGAACTATATACCTCATAGAGATGATTTAACCATAGTGTGCTCTTTATGCAACTTAGGTGAAAGAGAAGATAATTTTCACTTTATGGGTAAATGTCcgattttaagagaaatcagaAGGGATgCAATTGTATACGAGGGGCAAGATAAAAATCCAGAAATGTGCCGAGTATTACTGACGCACGAAGTTATGTGCAGAAGAGTTATAAAAGTTATGAAGAAGATATTACCTATACTTTGCCAATTTACTGAAACAACACcctaa
Protein Sequence
MSRGISFLNASYKIFTLILHKRFNEWIDGNKLLKEYQAGFRSGYSTIDHIFTLRCMAETFLRKEKKLYAFFVDFRAAFDMIDRKALFYKLYNKGMSWKFGRVIQNLYDDTTSKVWNGEALSEVFKTQSGVRQGCTLSPSMFAMFIDDLVDILPCGVEYAGKIIKLLMFADDIVLLAASAESLQLMINRLFECRVWNLIVNLDKSKVLIFKSGRGRKCAHEKWHYNGENIEVVTEFKYLGVIFTQNLSMEKHLKEKLMKAKCAISATWNRCFHNKSIAHSSKFKLFEAISASILFYAAQTWGTKQYDTVEKLLRYFCKRIFQLPRSTPNYVIMLETGISPLFIRTLKMQVDYVTKVLKMDDNRLPKIVALEVIRTKTSWCADWLELASECGINLNLESEELETSLYQLIAAVDLKHRDKYLNDATGSIYRQLYSQLNHNLGEKNYFRDDNSTAEISMMVKLRGELMPLNYIPHRDDLTIVCSLCNLGEREDNFHFMGKCPILREIRRDAIVYEGQDKNPEMCRVLLTHEVMCRRVIKVMKKILPILCQFTETTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-