Basic Information

Insect: Epirrita christyi
Gene Symbol: -
Assembly: GCA_951392215.1
Location: OX595859.1:11593828-11601979[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1 71 4.9 0.3 2 23 301 321 300 321 0.80

2 8 0.0003 0.021 16.0 1.5 1 23 329 351 329 351 0.98

3 8 0.022 1.5 10.2 0.2 1 23 369 392 369 392 0.93

4 8 0.00069 0.047 14.9 3.2 2 23 403 424 402 424 0.96

5 8 0.0014 0.097 13.9 2.5 3 23 432 452 430 452 0.96

6 8 7.8e-05 0.0053 17.9 2.3 2 23 459 480 459 480 0.97

7 8 3.7e-06 0.00025 22.0 2.9 1 23 486 508 486 508 0.97

8 8 0.024 1.6 10.0 0.0 1 21 514 534 514 535 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1	71	4.9	0.3	2	23	301	321	300	321	0.80
2	8	0.0003	0.021	16.0	1.5	1	23	329	351	329	351	0.98
3	8	0.022	1.5	10.2	0.2	1	23	369	392	369	392	0.93
4	8	0.00069	0.047	14.9	3.2	2	23	403	424	402	424	0.96
5	8	0.0014	0.097	13.9	2.5	3	23	432	452	430	452	0.96
6	8	7.8e-05	0.0053	17.9	2.3	2	23	459	480	459	480	0.97
7	8	3.7e-06	0.00025	22.0	2.9	1	23	486	508	486	508	0.97
8	8	0.024	1.6	10.0	0.0	1	21	514	534	514	535	0.94

Sequence Information

Coding Sequence: atggacAATATTTGCCGGCTCTGTTGCTCTTCAAGTTTTGTGAATAACAATATATTTGATGAAGAAAACGCACTATACCTCAAAATGTCTTTATATTTGCCTATAAAGGTTTTTAAGAATGACCGGCTCCCGCAGAAGTTGTGCGACAAGTGCAGCTGTAAAGTGAATGATTTCTACCAGTTCTGCAACGAAACTATCGAGGTCCAAGACAGATTACGAGCAGTTCTGAGTTCGAGTGGCGTCGTTCCCGAGGACATTGTAGACCTCACCCGTGTCAAGGCGAATGCCTCGCCTATCCCTAGCCACTACAAACTTGAACAAAGCACACAGACAGAGTGGAACTCACAAGACCATCCTAATGACAATAACATACAGCCTTCAGTCAGTGTCAGTAGTAATGTCCTCAATAAAATTCAGATCAAAGAAGAACCGAGAACTGCATCCCCCGTGAAAGAAGAGACCACAGACACAGTAGACTTTGATAATGGAGGTTTCTCCGATAACAGCGATGATATGTCTCTTATaacttttaaaaagaaaaagaagagtAAAAAGGATGTGAATGGAGTCAAAAAGAAAGCACAAAAGCAGAAGAAACTAAAGGATTGGGAGAATATTATGAATGGGTTACCGGACGCCACAGATGTATCAGTTGTGAATGATGCAATCAAAGCCGATGTTAAGGAGGAAATGGAGCAGAAGCCTGATTTAGATGTGACAGTGGATGTCAAAGCAGTCAAAGATGAGCCGGGGGAGGTGGAAGTGTTTCACTGCTGTATTTGCTTCCTGCAGTGCTATAGTAGGACAGACATACTGCACCATTATAGACAGCACGCTCTGGAGTCGCCGCAGCCGACGGAGGTGCCGGCCGCGCCGCCTCCGCCCGACGCTGACCCGCTGCGCTGCACGCGCTGTCGAAAGTCGTTGTCACGCTCGGAGTGGGCGCTGCATTGGGCGCGGCACTGGGAGCGCGACCGGCGCCCCTTCCGATGCGCGCTCTGCGAAAAGAGCTTCCGAGATGCGCACCAGATACTCAAGCACGGTCAGACGCACAAGTACGGCGCGGGCGCGGGCGACCGTGACGCGGAGCCACTCAAGAAACGATTCGTCTGCGACCTCTGTCCTGAAGGATTCGTGTATATGAGGTACCTGCTGGCGCACCGCACGCAGTCGCACCCGGACGCGTTAGCGCGCGCGCTAGTGCTGCGCTGCCATGTGTGCGCGCGCCAGTTCGCGCACCTGAATTCGCTGCGGCGCCACCTGCGCGCGCACTCCGGCGAGCGCAACCACCTGTGCAACGTGTGCGGCAAGGCGCTCTCCTCCAGGGAGCACTTGAAGTTCCACATCCGGATACACACCGGCTACAAGCCCAACGTCTGCAAAACGTGCGGCAAGGGGTTCGTGAAGAAGTGCAACTTGACGCTGCACGAGCGCGTGCACTCGGGCGAGAAGCCGCACGTGTGCTCGCACTGCGGCAAGGCGTTCAGCCAGCGCTCCACGCTGGTCATCCACGAGCGGTACCACAGCGGCGCGAGGCCGTACGCCTGCGCGCTGTGCGGCCGCGGCTTCGTCGCCAAGGGGCTGCTGTCCATGCATCTCAAGTCCACCTGCATATGGTATCTATCTACCTTCCCTTCCAGCCGGAACCTGACCTtcctcaacagcctttag
Protein Sequence: MDNICRLCCSSSFVNNNIFDEENALYLKMSLYLPIKVFKNDRLPQKLCDKCSCKVNDFYQFCNETIEVQDRLRAVLSSSGVVPEDIVDLTRVKANASPIPSHYKLEQSTQTEWNSQDHPNDNNIQPSVSVSSNVLNKIQIKEEPRTASPVKEETTDTVDFDNGGFSDNSDDMSLITFKKKKKSKKDVNGVKKKAQKQKKLKDWENIMNGLPDATDVSVVNDAIKADVKEEMEQKPDLDVTVDVKAVKDEPGEVEVFHCCICFLQCYSRTDILHHYRQHALESPQPTEVPAAPPPPDADPLRCTRCRKSLSRSEWALHWARHWERDRRPFRCALCEKSFRDAHQILKHGQTHKYGAGAGDRDAEPLKKRFVCDLCPEGFVYMRYLLAHRTQSHPDALARALVLRCHVCARQFAHLNSLRRHLRAHSGERNHLCNVCGKALSSREHLKFHIRIHTGYKPNVCKTCGKGFVKKCNLTLHERVHSGEKPHVCSHCGKAFSQRSTLVIHERYHSGARPYACALCGRGFVAKGLLSMHLKSTCIWYLSTFPSSRNLTFLNSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00639041;
90% Identity: -
80% Identity: -